RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 LOC389332A0A1B0GUA5 103 aa11.33□□□□□ -0.6
ERCC3-203ENST00000445889 GP9P14770 177 aa11.33□□□□□ -0.6
ERCC3-203ENST00000445889 HTR1DP28221 377 aa11.33□□□□□ -0.6
ERCC3-203ENST00000445889 LDLRAD2Q5SZI1 272 aa11.33□□□□□ -0.6
ERCC3-203ENST00000445889 BCL6BQ8N143 479 aaPredicted RBP11.33□□□□□ -0.6
ERCC3-203ENST00000445889 C5orf17Q8NAS9 161 aa11.33□□□□□ -0.6
ERCC3-203ENST00000445889 C19orf71A6NCJ1 209 aa11.32□□□□□ -0.6
ERCC3-203ENST00000445889 LTAP01374 205 aa11.32□□□□□ -0.6
ERCC3-203ENST00000445889 ARMS2P0C7Q2 107 aa11.32□□□□□ -0.6
ERCC3-203ENST00000445889 MAP1LC3CQ9BXW4 147 aa11.32□□□□□ -0.6
ERCC3-203ENST00000445889 TMEM191AQ9H0A3 160 aa11.32□□□□□ -0.6
ERCC3-203ENST00000445889 ST20Q9HBF5 79 aa11.32□□□□□ -0.6
ERCC3-203ENST00000445889 TMEM178BH3BS89 294 aa11.32□□□□□ -0.6
ERCC3-203ENST00000445889 M0R3E3 92 aa11.32□□□□□ -0.6
ERCC3-203ENST00000445889 RPL27AP46776 148 aaKnown RBP11.32□□□□□ -0.6
ERCC3-203ENST00000445889 LRRC10Q5BKY1 277 aa11.32□□□□□ -0.6
ERCC3-203ENST00000445889 KLF17Q5JT82 389 aaPredicted RBP11.32□□□□□ -0.6
ERCC3-203ENST00000445889 ZNF785A8K8V0 405 aa11.32□□□□□ -0.6
ERCC3-203ENST00000445889 CRXO43186 299 aaPredicted RBP11.32□□□□□ -0.6
ERCC3-203ENST00000445889 LOXP28300 417 aaPredicted RBP11.32□□□□□ -0.6
ERCC3-203ENST00000445889 TMEM108Q6UXF1 575 aa11.32□□□□□ -0.6
ERCC3-203ENST00000445889 STXBP6Q8NFX7 210 aa11.32□□□□□ -0.6
ERCC3-203ENST00000445889 TMEM186Q96B77 213 aa11.32□□□□□ -0.6
ERCC3-203ENST00000445889 FMC1Q96HJ9 113 aa11.32□□□□□ -0.6
ERCC3-203ENST00000445889 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.31□□□□□ -0.6
ERCC3-203ENST00000445889 K7EP13 123 aa11.31□□□□□ -0.6
ERCC3-203ENST00000445889 NCR2O95944 276 aa11.31□□□□□ -0.6
ERCC3-203ENST00000445889 TMEM116Q8NCL8 245 aa11.31□□□□□ -0.6
ERCC3-203ENST00000445889 CHCHD1Q96BP2 118 aaKnown RBP11.31□□□□□ -0.6
ERCC3-203ENST00000445889 APOHP02749 345 aaPredicted RBP11.3□□□□□ -0.6
ERCC3-203ENST00000445889 NAA38Q9BRA0 125 aaKnown RBP11.3□□□□□ -0.6
ERCC3-203ENST00000445889 SERTM2A0A1B0GWG4 89 aa11.3□□□□□ -0.6
ERCC3-203ENST00000445889 LIPFP07098 398 aa11.3□□□□□ -0.6
ERCC3-203ENST00000445889 IGHV1-8P0DP01 117 aa11.3□□□□□ -0.6
ERCC3-203ENST00000445889 MEF2CQ06413 473 aaPredicted RBP11.3□□□□□ -0.6
ERCC3-203ENST00000445889 LOXL1Q08397 574 aaPredicted RBP11.3□□□□□ -0.6
ERCC3-203ENST00000445889 PLGLAQ15195 96 aa11.3□□□□□ -0.6
ERCC3-203ENST00000445889 C8orf46Q8TAG6 207 aa11.3□□□□□ -0.6
ERCC3-203ENST00000445889 VPS25Q9BRG1 176 aa11.3□□□□□ -0.6
ERCC3-203ENST00000445889 SLC25A39Q9BZJ4 359 aaPredicted RBP11.3□□□□□ -0.6
ERCC3-203ENST00000445889 HIGD1AQ9Y241 93 aa11.3□□□□□ -0.6
ERCC3-203ENST00000445889 CEP295Q9C0D2 2601 aa11.3□□□□□ -0.6
ERCC3-203ENST00000445889 TRAV30A0A087WSZ9 112 aa11.29□□□□□ -0.6
ERCC3-203ENST00000445889 A0A0G2JNJ9 132 aa11.29□□□□□ -0.6
ERCC3-203ENST00000445889 SCRT2Q9NQ03 307 aa11.29□□□□□ -0.6
ERCC3-203ENST00000445889 Q9UFV3 132 aa11.29□□□□□ -0.6
ERCC3-203ENST00000445889 INSIG2Q9Y5U4 225 aa11.29□□□□□ -0.6
ERCC3-203ENST00000445889 IGHV3OR16-8A0A075B7F1 116 aa11.29□□□□□ -0.6
ERCC3-203ENST00000445889 IGLV2-11P01706 119 aa11.29□□□□□ -0.6
ERCC3-203ENST00000445889 OR5AL1P0C617 328 aa11.29□□□□□ -0.6
ERCC3-203ENST00000445889 CDKN1BP46527 198 aa11.29□□□□□ -0.6
ERCC3-203ENST00000445889 UQCRFS1P47985 274 aa11.29□□□□□ -0.6
ERCC3-203ENST00000445889 FAM162BQ5T6X4 162 aa11.29□□□□□ -0.6
ERCC3-203ENST00000445889 Q86TA4 180 aa11.29□□□□□ -0.6
ERCC3-203ENST00000445889 WFDC3Q8IUB2 231 aa11.29□□□□□ -0.6
ERCC3-203ENST00000445889 C16orf97H3BN30 126 aa11.29□□□□□ -0.6
ERCC3-203ENST00000445889 TMEM133Q9H2Q1 129 aa11.29□□□□□ -0.6
ERCC3-203ENST00000445889 SIGLEC9Q9Y336 463 aa11.29□□□□□ -0.6
ERCC3-203ENST00000445889 INS-IGF2F8WCM5 200 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 THBDP07204 575 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 CRYGCP07315 174 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 S100A7P31151 101 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 ARF6P62330 175 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 NEU4Q8WWR8 484 aaPredicted RBP11.28□□□□□ -0.6
ERCC3-203ENST00000445889 TRGV9Q99603 122 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 NDFIP1Q9BT67 221 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 DYNLRB1Q9NP97 96 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 TLN1Q9Y490 2541 aaKnown RBP11.28□□□□□ -0.6
ERCC3-203ENST00000445889 TRAV8-6A0A0B4J262 113 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 PSG9Q00887 426 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 DEFB125Q8N687 156 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 OR8A1Q8NGG7 326 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 OR4A5Q8NH83 315 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 PRSS3P2Q8NHM4 247 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 C8orf49Q96NF6 230 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 CST9LQ9H4G1 147 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 AP5S1Q9NUS5 200 aa11.28□□□□□ -0.6
ERCC3-203ENST00000445889 ZFHX3Q15911 3703 aa11.27□□□□□ -0.6
ERCC3-203ENST00000445889 ZNF292O60281 2723 aa11.27□□□□□ -0.6
ERCC3-203ENST00000445889 HLA-DRB1P01911 266 aa11.27□□□□□ -0.6
ERCC3-203ENST00000445889 IGFL4Q6B9Z1 124 aa11.27□□□□□ -0.6
ERCC3-203ENST00000445889 C12orf54Q6X4T0 127 aa11.27□□□□□ -0.6
ERCC3-203ENST00000445889 RASL11BQ9BPW5 248 aa11.27□□□□□ -0.6
ERCC3-203ENST00000445889 CNIH1O95406 144 aa11.27□□□□□ -0.61
ERCC3-203ENST00000445889 IGLC1P0CG04 106 aa11.27□□□□□ -0.61
ERCC3-203ENST00000445889 CRIP1P50238 77 aa11.27□□□□□ -0.61
ERCC3-203ENST00000445889 TMEM30BQ3MIR4 351 aa11.27□□□□□ -0.61
ERCC3-203ENST00000445889 SAPCD1Q5SSQ6 148 aa11.27□□□□□ -0.61
ERCC3-203ENST00000445889 PPP1R27Q86WC6 154 aa11.27□□□□□ -0.61
ERCC3-203ENST00000445889 ZNF492Q9P255 531 aa11.27□□□□□ -0.61
ERCC3-203ENST00000445889 A0A1B0GUT8 65 aa11.26□□□□□ -0.61
ERCC3-203ENST00000445889 LY6HO94772 140 aa11.26□□□□□ -0.61
ERCC3-203ENST00000445889 IGHV3-23P01764 117 aa11.26□□□□□ -0.61
ERCC3-203ENST00000445889 IFI27P40305 119 aaPredicted RBP11.26□□□□□ -0.61
ERCC3-203ENST00000445889 CT83Q5H943 113 aa11.26□□□□□ -0.61
ERCC3-203ENST00000445889 HSPB8Q9UJY1 196 aa11.26□□□□□ -0.61
ERCC3-203ENST00000445889 AKAP6Q13023 2319 aa11.26□□□□□ -0.61
ERCC3-203ENST00000445889 IGHV3-35A0A0C4DH35 117 aa11.26□□□□□ -0.61
ERCC3-203ENST00000445889 TMEM213A2RRL7 107 aa11.26□□□□□ -0.61
ERCC3-203ENST00000445889 FCGR2BP31994 310 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms