RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 H3BRN7 92 aa12.98□□□□□ -0.33
LIME1-202ENST00000444951 BUB3O43684 328 aa12.98□□□□□ -0.33
LIME1-202ENST00000444951 SPP1P10451 314 aa12.98□□□□□ -0.33
LIME1-202ENST00000444951 S100A7P31151 101 aa12.98□□□□□ -0.33
LIME1-202ENST00000444951 EGFEM1PQ0D2K5 195 aa12.98□□□□□ -0.33
LIME1-202ENST00000444951 C16orf54Q6UWD8 224 aa12.98□□□□□ -0.33
LIME1-202ENST00000444951 S100A7AQ86SG5 101 aa12.98□□□□□ -0.33
LIME1-202ENST00000444951 OR8I2Q8N0Y5 310 aa12.98□□□□□ -0.33
LIME1-202ENST00000444951 OR10G4Q8NGN3 311 aa12.98□□□□□ -0.33
LIME1-202ENST00000444951 OR10G9Q8NGN4 311 aa12.98□□□□□ -0.33
LIME1-202ENST00000444951 OR10G7Q8NGN6 311 aa12.98□□□□□ -0.33
LIME1-202ENST00000444951 GATAD1Q8WUU5 269 aa12.98□□□□□ -0.33
LIME1-202ENST00000444951 TMED6Q8WW62 240 aa12.98□□□□□ -0.33
LIME1-202ENST00000444951 SIGLEC8Q9NYZ4 499 aa12.98□□□□□ -0.33
LIME1-202ENST00000444951 TECRQ9NZ01 308 aaKnown RBP12.98□□□□□ -0.33
LIME1-202ENST00000444951 IZUMO1RA6ND01 250 aa12.97□□□□□ -0.33
LIME1-202ENST00000444951 IGLV1-51P01701 117 aa12.97□□□□□ -0.33
LIME1-202ENST00000444951 M6PRP20645 277 aa12.97□□□□□ -0.33
LIME1-202ENST00000444951 SERF2P84101 59 aa12.97□□□□□ -0.33
LIME1-202ENST00000444951 AKR1C8PQ5T2L2 129 aa12.97□□□□□ -0.33
LIME1-202ENST00000444951 RBPMS2Q6ZRY4 209 aaKnown RBP12.97□□□□□ -0.33
LIME1-202ENST00000444951 MIR17HGQ75NE6 70 aa12.97□□□□□ -0.33
LIME1-202ENST00000444951 GBGT1Q8N5D6 347 aa12.97□□□□□ -0.33
LIME1-202ENST00000444951 STOML3Q8TAV4 291 aa12.97□□□□□ -0.33
LIME1-202ENST00000444951 SEPSECSQ9HD40 501 aaKnown RBP12.97□□□□□ -0.33
LIME1-202ENST00000444951 HUWE1Q7Z6Z7 4374 aaKnown RBP12.96□□□□□ -0.33
LIME1-202ENST00000444951 A0A1W2PPV4 95 aa12.96□□□□□ -0.33
LIME1-202ENST00000444951 TFPI2P48307 235 aa12.96□□□□□ -0.33
LIME1-202ENST00000444951 INSL3P51460 131 aa12.96□□□□□ -0.33
LIME1-202ENST00000444951 RHOBP62745 196 aa12.96□□□□□ -0.33
LIME1-202ENST00000444951 GUCA2BQ16661 112 aa12.96□□□□□ -0.33
LIME1-202ENST00000444951 TMEM41BQ5BJD5 291 aa12.96□□□□□ -0.33
LIME1-202ENST00000444951 DEFB121Q5J5C9 76 aa12.96□□□□□ -0.33
LIME1-202ENST00000444951 WFDC3Q8IUB2 231 aa12.96□□□□□ -0.33
LIME1-202ENST00000444951 TMEM61Q8N0U2 210 aa12.96□□□□□ -0.33
LIME1-202ENST00000444951 GLMPQ8WWB7 406 aa12.96□□□□□ -0.33
LIME1-202ENST00000444951 GPR61Q9BZJ8 451 aa12.96□□□□□ -0.33
LIME1-202ENST00000444951 HMGB3O15347 200 aaKnown RBP12.95□□□□□ -0.34
LIME1-202ENST00000444951 MBP02144 154 aa12.95□□□□□ -0.34
LIME1-202ENST00000444951 SNRPCP09234 159 aaKnown RBP12.95□□□□□ -0.34
LIME1-202ENST00000444951 SEC11BP0C7V7 166 aa12.95□□□□□ -0.34
LIME1-202ENST00000444951 SIGLEC15Q6ZMC9 328 aa12.95□□□□□ -0.34
LIME1-202ENST00000444951 STXBP6Q8NFX7 210 aa12.95□□□□□ -0.34
LIME1-202ENST00000444951 RPRMQ9NS64 109 aa12.95□□□□□ -0.34
LIME1-202ENST00000444951 FUT9Q9Y231 359 aa12.95□□□□□ -0.34
LIME1-202ENST00000444951 DNAH7Q8WXX0 4024 aa12.94□□□□□ -0.34
LIME1-202ENST00000444951 HELTA6NFD8 242 aa12.94□□□□□ -0.34
LIME1-202ENST00000444951 C1orf194Q5T5A4 169 aa12.94□□□□□ -0.34
LIME1-202ENST00000444951 LCN12Q6JVE5 192 aa12.94□□□□□ -0.34
LIME1-202ENST00000444951 MRPL32Q9BYC8 188 aaKnown RBP12.94□□□□□ -0.34
LIME1-202ENST00000444951 PLA2G2EQ9NZK7 142 aa12.94□□□□□ -0.34
LIME1-202ENST00000444951 TENM3Q9P273 2699 aa12.93□□□□□ -0.34
LIME1-202ENST00000444951 ZNF785A8K8V0 405 aa12.93□□□□□ -0.34
LIME1-202ENST00000444951 DNASE2O00115 360 aaPredicted RBP12.93□□□□□ -0.34
LIME1-202ENST00000444951 ATF4P18848 351 aaPredicted RBP12.93□□□□□ -0.34
LIME1-202ENST00000444951 GALR1P47211 349 aa12.93□□□□□ -0.34
LIME1-202ENST00000444951 CDC34P49427 236 aaPredicted RBP12.93□□□□□ -0.34
LIME1-202ENST00000444951 EIF5AL1Q6IS14 154 aaKnown RBP12.93□□□□□ -0.34
LIME1-202ENST00000444951 RPP25LQ8N5L8 163 aaKnown RBP12.93□□□□□ -0.34
LIME1-202ENST00000444951 SLC25A2Q9BXI2 301 aa12.93□□□□□ -0.34
LIME1-202ENST00000444951 ACTR3CQ9C0K3 210 aaPredicted RBP12.93□□□□□ -0.34
LIME1-202ENST00000444951 H3BTX0 84 aa12.92□□□□□ -0.34
LIME1-202ENST00000444951 OR7C2O60412 319 aa12.92□□□□□ -0.34
LIME1-202ENST00000444951 RPL7P18124 248 aaKnown RBP12.92□□□□□ -0.34
LIME1-202ENST00000444951 FAM74A1Q5RGS3 127 aa12.92□□□□□ -0.34
LIME1-202ENST00000444951 FAM90A2PQ658T7 463 aa12.92□□□□□ -0.34
LIME1-202ENST00000444951 ALKAL2Q6UX46 152 aa12.92□□□□□ -0.34
LIME1-202ENST00000444951 BPIFA4PQ86YQ2 179 aa12.92□□□□□ -0.34
LIME1-202ENST00000444951 OR2K2Q8NGT1 345 aa12.92□□□□□ -0.34
LIME1-202ENST00000444951 FAM213BQ8TBF2 198 aa12.92□□□□□ -0.34
LIME1-202ENST00000444951 RAB24Q969Q5 203 aa12.92□□□□□ -0.34
LIME1-202ENST00000444951 MS4A6AQ9H2W1 248 aa12.92□□□□□ -0.34
LIME1-202ENST00000444951 RNF24Q9Y225 148 aa12.92□□□□□ -0.34
LIME1-202ENST00000444951 SMAD5-AS1Q9Y6J3 95 aa12.92□□□□□ -0.34
LIME1-202ENST00000444951 CD5P06127 495 aa12.91□□□□□ -0.34
LIME1-202ENST00000444951 PYYP10082 97 aa12.91□□□□□ -0.34
LIME1-202ENST00000444951 FHITP49789 147 aa12.91□□□□□ -0.34
LIME1-202ENST00000444951 PAFAH1B2P68402 229 aa12.91□□□□□ -0.34
LIME1-202ENST00000444951 SSX7Q7RTT5 188 aa12.91□□□□□ -0.34
LIME1-202ENST00000444951 GPR82Q96P67 336 aa12.91□□□□□ -0.34
LIME1-202ENST00000444951 TRAV25A0A0B4J276 109 aa12.9□□□□□ -0.34
LIME1-202ENST00000444951 TSPAN4O14817 238 aa12.9□□□□□ -0.34
LIME1-202ENST00000444951 OR10J4P0C629 311 aa12.9□□□□□ -0.34
LIME1-202ENST00000444951 TAS2R45P59539 299 aa12.9□□□□□ -0.34
LIME1-202ENST00000444951 KHDC3LQ587J8 217 aa12.9□□□□□ -0.34
LIME1-202ENST00000444951 IQCF2Q8IXL9 164 aa12.9□□□□□ -0.34
LIME1-202ENST00000444951 FAM167A-AS1Q96KT0 104 aa12.9□□□□□ -0.34
LIME1-202ENST00000444951 PAXXQ9BUH6 204 aa12.9□□□□□ -0.34
LIME1-202ENST00000444951 UMAD1C9J7I0 102 aa12.89□□□□□ -0.35
LIME1-202ENST00000444951 GP9P14770 177 aa12.89□□□□□ -0.35
LIME1-202ENST00000444951 ZNF726P1Q15940 193 aa12.89□□□□□ -0.35
LIME1-202ENST00000444951 LCN15Q6UWW0 184 aa12.89□□□□□ -0.35
LIME1-202ENST00000444951 LRRC20Q8TCA0 184 aa12.89□□□□□ -0.35
LIME1-202ENST00000444951 BLNKQ8WV28 456 aa12.89□□□□□ -0.35
LIME1-202ENST00000444951 C17orf77Q96MU5 243 aa12.89□□□□□ -0.35
LIME1-202ENST00000444951 PRR25Q96S07 402 aa12.89□□□□□ -0.35
LIME1-202ENST00000444951 B9D2Q9BPU9 175 aa12.89□□□□□ -0.35
LIME1-202ENST00000444951 OR51M1Q9H341 326 aa12.89□□□□□ -0.35
LIME1-202ENST00000444951 NRN1Q9NPD7 142 aa12.89□□□□□ -0.35
LIME1-202ENST00000444951 DYNC2H1Q8NCM8 4307 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms