RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 TMEM252Q8N6L7 170 aa13.59□□□□□ -0.23
CCDC188-202ENST00000444532 C16orf92Q96LL3 132 aa13.59□□□□□ -0.23
CCDC188-202ENST00000444532 SCRT1Q9BWW7 348 aa13.59□□□□□ -0.23
CCDC188-202ENST00000444532 UQCC1Q9NVA1 299 aa13.59□□□□□ -0.23
CCDC188-202ENST00000444532 CSMD3Q7Z407 3707 aa13.59□□□□□ -0.23
CCDC188-202ENST00000444532 RPL7P18124 248 aaKnown RBP13.58□□□□□ -0.24
CCDC188-202ENST00000444532 C4BPBP20851 252 aa13.58□□□□□ -0.24
CCDC188-202ENST00000444532 VWC2Q2TAL6 325 aa13.58□□□□□ -0.24
CCDC188-202ENST00000444532 PATE2Q6UY27 113 aa13.58□□□□□ -0.24
CCDC188-202ENST00000444532 FOXI2Q6ZQN5 318 aa13.58□□□□□ -0.24
CCDC188-202ENST00000444532 CLUHP3Q96NS8 147 aa13.58□□□□□ -0.24
CCDC188-202ENST00000444532 MGST2Q99735 147 aa13.58□□□□□ -0.24
CCDC188-202ENST00000444532 C1QTNF4Q9BXJ3 329 aa13.58□□□□□ -0.24
CCDC188-202ENST00000444532 C11orf68Q9H3H3 251 aaKnown RBP13.58□□□□□ -0.24
CCDC188-202ENST00000444532 SAV1Q9H4B6 383 aaPredicted RBP13.58□□□□□ -0.24
CCDC188-202ENST00000444532 KMT2CQ8NEZ4 4911 aaKnown RBP13.57□□□□□ -0.24
CCDC188-202ENST00000444532 IGSF23A1L1A6 192 aa13.57□□□□□ -0.24
CCDC188-202ENST00000444532 CAMLGP49069 296 aa13.57□□□□□ -0.24
CCDC188-202ENST00000444532 EWSR1Q01844 656 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC188-202ENST00000444532 ATP6V1FQ16864 119 aa13.57□□□□□ -0.24
CCDC188-202ENST00000444532 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.57□□□□□ -0.24
CCDC188-202ENST00000444532 C17orf77Q96MU5 243 aa13.57□□□□□ -0.24
CCDC188-202ENST00000444532 UHRF2Q96PU4 802 aa13.57□□□□□ -0.24
CCDC188-202ENST00000444532 ARV1Q9H2C2 271 aa13.57□□□□□ -0.24
CCDC188-202ENST00000444532 RPRMQ9NS64 109 aa13.57□□□□□ -0.24
CCDC188-202ENST00000444532 WDR83OSQ9Y284 106 aa13.57□□□□□ -0.24
CCDC188-202ENST00000444532 ELOA3CA0A087WX78 387 aaPredicted RBP13.56□□□□□ -0.24
CCDC188-202ENST00000444532 GDF5OSQ5U4N7 250 aa13.56□□□□□ -0.24
CCDC188-202ENST00000444532 CSNK1G2-AS1Q8NCQ2 148 aa13.56□□□□□ -0.24
CCDC188-202ENST00000444532 E5RGE8 158 aa13.55□□□□□ -0.24
CCDC188-202ENST00000444532 SSNA1O43805 119 aa13.55□□□□□ -0.24
CCDC188-202ENST00000444532 RGS21Q2M5E4 152 aa13.55□□□□□ -0.24
CCDC188-202ENST00000444532 EBLN2Q6P2I7 272 aa13.55□□□□□ -0.24
CCDC188-202ENST00000444532 Q6ZRG5 221 aa13.55□□□□□ -0.24
CCDC188-202ENST00000444532 SLC25A31Q9H0C2 315 aa13.55□□□□□ -0.24
CCDC188-202ENST00000444532 CXorf65A6NEN9 183 aa13.54□□□□□ -0.24
CCDC188-202ENST00000444532 ZNF705EA8MWA4 302 aaPredicted RBP13.54□□□□□ -0.24
CCDC188-202ENST00000444532 COX7A2P2O60397 106 aa13.54□□□□□ -0.24
CCDC188-202ENST00000444532 MIFP14174 115 aa13.54□□□□□ -0.24
CCDC188-202ENST00000444532 H2BFSP57053 126 aa13.54□□□□□ -0.24
CCDC188-202ENST00000444532 DEFB1P60022 68 aa13.54□□□□□ -0.24
CCDC188-202ENST00000444532 LINC00305Q7Z4B0 112 aa13.54□□□□□ -0.24
CCDC188-202ENST00000444532 CHAC2Q8WUX2 184 aa13.54□□□□□ -0.24
CCDC188-202ENST00000444532 C20orf173Q96LM9 149 aa13.54□□□□□ -0.24
CCDC188-202ENST00000444532 DNAJC4Q9NNZ3 241 aa13.54□□□□□ -0.24
CCDC188-202ENST00000444532 CLEC5AQ9NY25 188 aa13.54□□□□□ -0.24
CCDC188-202ENST00000444532 ALG5Q9Y673 324 aa13.54□□□□□ -0.24
CCDC188-202ENST00000444532 A0A087X0K7 114 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 A0A0J9YX75 114 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 LCE6AA0A183 80 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 UBE2L5PA0A1B0GUS4 154 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 RPL29P47914 159 aaKnown RBP13.53□□□□□ -0.24
CCDC188-202ENST00000444532 PRR20EP86478 221 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 PRR20CP86479 221 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 PRR20DP86480 221 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 PRR20BP86481 221 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 PRR20AP86496 221 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 FGL1Q08830 312 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 OXA1LQ15070 435 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 LRRC37A5PQ49AS3 106 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 C10orf113Q5VZT2 155 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 OR4B1Q8NGF8 309 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 TMEM37Q8WXS4 190 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 OR5AC2Q9NZP5 309 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 XCL2Q9UBD3 114 aa13.53□□□□□ -0.24
CCDC188-202ENST00000444532 NUPR2A6NF83 97 aa13.52□□□□□ -0.25
CCDC188-202ENST00000444532 MPDU1O75352 247 aa13.52□□□□□ -0.25
CCDC188-202ENST00000444532 IGKV3-20P01619 116 aa13.52□□□□□ -0.25
CCDC188-202ENST00000444532 NHLH2Q02577 135 aa13.52□□□□□ -0.25
CCDC188-202ENST00000444532 BAXQ07812 192 aa13.52□□□□□ -0.25
CCDC188-202ENST00000444532 PMS2P11Q13670 270 aa13.52□□□□□ -0.25
CCDC188-202ENST00000444532 FAM78BQ5VT40 261 aa13.52□□□□□ -0.25
CCDC188-202ENST00000444532 MIC13Q5XKP0 118 aa13.52□□□□□ -0.25
CCDC188-202ENST00000444532 Q8NAQ8 132 aa13.52□□□□□ -0.25
CCDC188-202ENST00000444532 OR1L4Q8NGR5 311 aa13.52□□□□□ -0.25
CCDC188-202ENST00000444532 MFFQ9GZY8 342 aa13.52□□□□□ -0.25
CCDC188-202ENST00000444532 X6R8D5 127 aa13.52□□□□□ -0.25
CCDC188-202ENST00000444532 TRAV8-2A0A0B4J237 113 aa13.51□□□□□ -0.25
CCDC188-202ENST00000444532 F6UB75 175 aa13.51□□□□□ -0.25
CCDC188-202ENST00000444532 H0YIZ8 118 aa13.51□□□□□ -0.25
CCDC188-202ENST00000444532 MRPS12O15235 138 aaKnown RBP13.51□□□□□ -0.25
CCDC188-202ENST00000444532 PSG9Q00887 426 aa13.51□□□□□ -0.25
CCDC188-202ENST00000444532 BPIFA4PQ86YQ2 179 aa13.51□□□□□ -0.25
CCDC188-202ENST00000444532 C11orf45Q8TAV5 145 aa13.51□□□□□ -0.25
CCDC188-202ENST00000444532 LRRC20Q8TCA0 184 aa13.51□□□□□ -0.25
CCDC188-202ENST00000444532 PPP1R1CQ8WVI7 109 aa13.51□□□□□ -0.25
CCDC188-202ENST00000444532 PFDN5Q99471 154 aa13.51□□□□□ -0.25
CCDC188-202ENST00000444532 IGHV4-28A0A0C4DH34 117 aa13.5□□□□□ -0.25
CCDC188-202ENST00000444532 A8MTW9 85 aa13.5□□□□□ -0.25
CCDC188-202ENST00000444532 DEFB4AO15263 64 aa13.5□□□□□ -0.25
CCDC188-202ENST00000444532 PET100P0DJ07 73 aa13.5□□□□□ -0.25
CCDC188-202ENST00000444532 CXCL2P19875 107 aa13.5□□□□□ -0.25
CCDC188-202ENST00000444532 FGF7P21781 194 aa13.5□□□□□ -0.25
CCDC188-202ENST00000444532 OPCMLQ14982 345 aa13.5□□□□□ -0.25
CCDC188-202ENST00000444532 CEMP1Q6PRD7 247 aaPredicted RBP13.5□□□□□ -0.25
CCDC188-202ENST00000444532 OR5C1Q8NGR4 320 aa13.5□□□□□ -0.25
CCDC188-202ENST00000444532 SLC39A9Q9NUM3 307 aa13.5□□□□□ -0.25
CCDC188-202ENST00000444532 JTBO76095 146 aa13.49□□□□□ -0.25
CCDC188-202ENST00000444532 DUSP14O95147 198 aaKnown RBP13.49□□□□□ -0.25
CCDC188-202ENST00000444532 RBMY1A1P0DJD3 496 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms