RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 RETNQ9HD89 108 aa12.9□□□□□ -0.34
SMARCAL1-209ENST00000444508 ELOA3CA0A087WX78 387 aaPredicted RBP12.89□□□□□ -0.35
SMARCAL1-209ENST00000444508 RPL7P18124 248 aaKnown RBP12.89□□□□□ -0.35
SMARCAL1-209ENST00000444508 RPL12P30050 165 aaKnown RBP12.89□□□□□ -0.35
SMARCAL1-209ENST00000444508 MIC13Q5XKP0 118 aa12.89□□□□□ -0.35
SMARCAL1-209ENST00000444508 ASB13Q8WXK3 278 aa12.89□□□□□ -0.35
SMARCAL1-209ENST00000444508 RSG1Q9BU20 258 aa12.89□□□□□ -0.35
SMARCAL1-209ENST00000444508 ATF4P18848 351 aaPredicted RBP12.88□□□□□ -0.35
SMARCAL1-209ENST00000444508 RPL29P47914 159 aaKnown RBP12.88□□□□□ -0.35
SMARCAL1-209ENST00000444508 PSMB3P49720 205 aa12.88□□□□□ -0.35
SMARCAL1-209ENST00000444508 B2MP61769 119 aa12.88□□□□□ -0.35
SMARCAL1-209ENST00000444508 C10orf113Q5VZT2 155 aa12.88□□□□□ -0.35
SMARCAL1-209ENST00000444508 PATE2Q6UY27 113 aa12.88□□□□□ -0.35
SMARCAL1-209ENST00000444508 LINC00305Q7Z4B0 112 aa12.88□□□□□ -0.35
SMARCAL1-209ENST00000444508 OR1L4Q8NGR5 311 aa12.88□□□□□ -0.35
SMARCAL1-209ENST00000444508 CHAC2Q8WUX2 184 aa12.88□□□□□ -0.35
SMARCAL1-209ENST00000444508 HSPB11Q9Y547 144 aa12.88□□□□□ -0.35
SMARCAL1-209ENST00000444508 ISLRO14498 428 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 GIPP09681 153 aaPredicted RBP12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 LYL1P12980 280 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 PRR20EP86478 221 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 PRR20CP86479 221 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 PRR20DP86480 221 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 PRR20BP86481 221 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 PRR20AP86496 221 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 FGL1Q08830 312 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 OPCMLQ14982 345 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 ACTL10Q5JWF8 245 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 LINC00052Q96N35 136 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 PFDN5Q99471 154 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 ATP5SQ99766 215 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 NPCDR1Q9BY65 106 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 CSTL1Q9H114 145 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 DNAJC4Q9NNZ3 241 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 SLC39A9Q9NUM3 307 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 PXMP4Q9Y6I8 212 aa12.87□□□□□ -0.35
SMARCAL1-209ENST00000444508 KNCNA6PVL3 124 aa12.86□□□□□ -0.35
SMARCAL1-209ENST00000444508 Q6ZWC4 215 aa12.86□□□□□ -0.35
SMARCAL1-209ENST00000444508 ZNF709Q8N972 641 aa12.86□□□□□ -0.35
SMARCAL1-209ENST00000444508 TMEM37Q8WXS4 190 aa12.86□□□□□ -0.35
SMARCAL1-209ENST00000444508 C16orf92Q96LL3 132 aa12.86□□□□□ -0.35
SMARCAL1-209ENST00000444508 KCNIP2Q9NS61 270 aa12.86□□□□□ -0.35
SMARCAL1-209ENST00000444508 SOCS3O14543 225 aa12.85□□□□□ -0.35
SMARCAL1-209ENST00000444508 DEFB135Q30KP9 77 aa12.85□□□□□ -0.35
SMARCAL1-209ENST00000444508 TP53TG1Q9Y2A0 90 aa12.85□□□□□ -0.35
SMARCAL1-209ENST00000444508 C17orf112F2Z3M2 114 aa12.84□□□□□ -0.35
SMARCAL1-209ENST00000444508 SPRY2O43597 315 aa12.84□□□□□ -0.35
SMARCAL1-209ENST00000444508 IFNA5P01569 189 aa12.84□□□□□ -0.35
SMARCAL1-209ENST00000444508 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.84□□□□□ -0.35
SMARCAL1-209ENST00000444508 TRPT1Q86TN4 253 aaKnown RBP12.84□□□□□ -0.35
SMARCAL1-209ENST00000444508 OVOL2Q9BRP0 275 aa12.84□□□□□ -0.35
SMARCAL1-209ENST00000444508 SMIM3Q9BZL3 60 aa12.84□□□□□ -0.35
SMARCAL1-209ENST00000444508 WDR61Q9GZS3 305 aaKnown RBP12.84□□□□□ -0.35
SMARCAL1-209ENST00000444508 CA1P00915 261 aaPredicted RBP12.83□□□□□ -0.36
SMARCAL1-209ENST00000444508 SPP1P10451 314 aa12.83□□□□□ -0.36
SMARCAL1-209ENST00000444508 MORN3Q6PF18 240 aaPredicted RBP12.83□□□□□ -0.36
SMARCAL1-209ENST00000444508 BPIFA4PQ86YQ2 179 aa12.83□□□□□ -0.36
SMARCAL1-209ENST00000444508 LRRC20Q8TCA0 184 aa12.83□□□□□ -0.36
SMARCAL1-209ENST00000444508 SCGB1C1Q8TD33 95 aa12.83□□□□□ -0.36
SMARCAL1-209ENST00000444508 GATAD1Q8WUU5 269 aa12.83□□□□□ -0.36
SMARCAL1-209ENST00000444508 RPRMQ9NS64 109 aa12.83□□□□□ -0.36
SMARCAL1-209ENST00000444508 AGRNO00468 2067 aa12.82□□□□□ -0.36
SMARCAL1-209ENST00000444508 A0A087X0K7 114 aa12.82□□□□□ -0.36
SMARCAL1-209ENST00000444508 FOXI2Q6ZQN5 318 aa12.82□□□□□ -0.36
SMARCAL1-209ENST00000444508 RNF183Q96D59 192 aa12.82□□□□□ -0.36
SMARCAL1-209ENST00000444508 C17orf77Q96MU5 243 aa12.82□□□□□ -0.36
SMARCAL1-209ENST00000444508 HLA-DRB4P13762 266 aa12.81□□□□□ -0.36
SMARCAL1-209ENST00000444508 TMEM41BQ5BJD5 291 aa12.81□□□□□ -0.36
SMARCAL1-209ENST00000444508 SPATA31B1PQ5VZV4 182 aa12.81□□□□□ -0.36
SMARCAL1-209ENST00000444508 EBLN2Q6P2I7 272 aa12.81□□□□□ -0.36
SMARCAL1-209ENST00000444508 OR2T35Q8NGX2 323 aa12.81□□□□□ -0.36
SMARCAL1-209ENST00000444508 HLA-DRB4X5D2U9 266 aa12.81□□□□□ -0.36
SMARCAL1-209ENST00000444508 H3BMM0 161 aa12.8□□□□□ -0.36
SMARCAL1-209ENST00000444508 MRPS12O15235 138 aaKnown RBP12.8□□□□□ -0.36
SMARCAL1-209ENST00000444508 NUTF2P61970 127 aaKnown RBP12.8□□□□□ -0.36
SMARCAL1-209ENST00000444508 MORN5Q5VZ52 161 aa12.8□□□□□ -0.36
SMARCAL1-209ENST00000444508 LCN15Q6UWW0 184 aa12.8□□□□□ -0.36
SMARCAL1-209ENST00000444508 AQP10Q96PS8 301 aa12.8□□□□□ -0.36
SMARCAL1-209ENST00000444508 SAV1Q9H4B6 383 aaPredicted RBP12.8□□□□□ -0.36
SMARCAL1-209ENST00000444508 EDA2RQ9HAV5 297 aa12.8□□□□□ -0.36
SMARCAL1-209ENST00000444508 FXYD6-FXYD2A0A087WZ82 144 aa12.79□□□□□ -0.36
SMARCAL1-209ENST00000444508 CXCL2P19875 107 aa12.79□□□□□ -0.36
SMARCAL1-209ENST00000444508 DEFB1P60022 68 aa12.79□□□□□ -0.36
SMARCAL1-209ENST00000444508 Q5BKY6 102 aa12.79□□□□□ -0.36
SMARCAL1-209ENST00000444508 GCSAMLQ5JQS6 135 aa12.79□□□□□ -0.36
SMARCAL1-209ENST00000444508 INO80EQ8NBZ0 244 aaPredicted RBP12.79□□□□□ -0.36
SMARCAL1-209ENST00000444508 C20orf173Q96LM9 149 aa12.79□□□□□ -0.36
SMARCAL1-209ENST00000444508 PARD6GQ9BYG4 376 aaPredicted RBP12.79□□□□□ -0.36
SMARCAL1-209ENST00000444508 DNAH7Q8WXX0 4024 aa12.78□□□□□ -0.36
SMARCAL1-209ENST00000444508 TRAV8-2A0A0B4J237 113 aa12.78□□□□□ -0.36
SMARCAL1-209ENST00000444508 TRAV5A0A0B4J249 113 aa12.78□□□□□ -0.36
SMARCAL1-209ENST00000444508 GDF5OSQ5U4N7 250 aa12.78□□□□□ -0.36
SMARCAL1-209ENST00000444508 FAM78BQ5VT40 261 aa12.78□□□□□ -0.36
SMARCAL1-209ENST00000444508 IGFL4Q6B9Z1 124 aa12.78□□□□□ -0.36
SMARCAL1-209ENST00000444508 RNF182Q8N6D2 247 aa12.78□□□□□ -0.36
SMARCAL1-209ENST00000444508 ZNF738Q8NE65 137 aa12.78□□□□□ -0.36
SMARCAL1-209ENST00000444508 HRH4Q9H3N8 390 aa12.78□□□□□ -0.36
SMARCAL1-209ENST00000444508 WFDC1Q9HC57 220 aa12.78□□□□□ -0.36
SMARCAL1-209ENST00000444508 A0A0J9YX75 114 aa12.77□□□□□ -0.37
SMARCAL1-209ENST00000444508 IGKV3-20P01619 116 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms