RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 SMLR1H3BR10 107 aa9.43□□□□□ -0.9
PDLIM2-212ENST00000443561 OR5G3P0C626 314 aa9.43□□□□□ -0.9
PDLIM2-212ENST00000443561 SPATA31B1PQ5VZV4 182 aa9.43□□□□□ -0.9
PDLIM2-212ENST00000443561 TRPT1Q86TN4 253 aaKnown RBP9.43□□□□□ -0.9
PDLIM2-212ENST00000443561 ATP5SQ99766 215 aa9.43□□□□□ -0.9
PDLIM2-212ENST00000443561 RSG1Q9BU20 258 aa9.43□□□□□ -0.9
PDLIM2-212ENST00000443561 SLC39A9Q9NUM3 307 aa9.43□□□□□ -0.9
PDLIM2-212ENST00000443561 PXMP4Q9Y6I8 212 aa9.43□□□□□ -0.9
PDLIM2-212ENST00000443561 U3KQK5 164 aa9.43□□□□□ -0.9
PDLIM2-212ENST00000443561 PET100P0DJ07 73 aa9.42□□□□□ -0.9
PDLIM2-212ENST00000443561 PRB4P10163 310 aaPredicted RBP9.42□□□□□ -0.9
PDLIM2-212ENST00000443561 C4BPBP20851 252 aa9.42□□□□□ -0.9
PDLIM2-212ENST00000443561 HLA-DMBP28068 263 aa9.42□□□□□ -0.9
PDLIM2-212ENST00000443561 NUP62P37198 522 aaPredicted RBP9.42□□□□□ -0.9
PDLIM2-212ENST00000443561 RAP2BP61225 183 aa9.42□□□□□ -0.9
PDLIM2-212ENST00000443561 B2MP61769 119 aa9.42□□□□□ -0.9
PDLIM2-212ENST00000443561 PAFAH1B2P68402 229 aa9.42□□□□□ -0.9
PDLIM2-212ENST00000443561 PSMG4Q5JS54 123 aa9.42□□□□□ -0.9
PDLIM2-212ENST00000443561 IGFL4Q6B9Z1 124 aa9.42□□□□□ -0.9
PDLIM2-212ENST00000443561 OR8I2Q8N0Y5 310 aa9.42□□□□□ -0.9
PDLIM2-212ENST00000443561 PPP1R14BQ96C90 147 aa9.42□□□□□ -0.9
PDLIM2-212ENST00000443561 AQP10Q96PS8 301 aa9.42□□□□□ -0.9
PDLIM2-212ENST00000443561 OVOL2Q9BRP0 275 aa9.42□□□□□ -0.9
PDLIM2-212ENST00000443561 FBXL17Q9UF56 701 aa9.42□□□□□ -0.9
PDLIM2-212ENST00000443561 A0A087X0K7 114 aa9.41□□□□□ -0.9
PDLIM2-212ENST00000443561 SNRPCP09234 159 aaKnown RBP9.41□□□□□ -0.9
PDLIM2-212ENST00000443561 AP2S1P53680 142 aaPredicted RBP9.41□□□□□ -0.9
PDLIM2-212ENST00000443561 PXDC1Q5TGL8 231 aa9.41□□□□□ -0.9
PDLIM2-212ENST00000443561 LINC00305Q7Z4B0 112 aa9.41□□□□□ -0.9
PDLIM2-212ENST00000443561 FAM167A-AS1Q96KT0 104 aa9.41□□□□□ -0.9
PDLIM2-212ENST00000443561 EDA2RQ9HAV5 297 aa9.41□□□□□ -0.9
PDLIM2-212ENST00000443561 SEPSECSQ9HD40 501 aaKnown RBP9.41□□□□□ -0.9
PDLIM2-212ENST00000443561 TNFSF18Q9UNG2 199 aa9.41□□□□□ -0.9
PDLIM2-212ENST00000443561 F6UB75 175 aa9.4□□□□□ -0.9
PDLIM2-212ENST00000443561 H3BQ15 152 aa9.4□□□□□ -0.9
PDLIM2-212ENST00000443561 SLC17A3O00476 420 aa9.4□□□□□ -0.9
PDLIM2-212ENST00000443561 IGLC2P0DOY2 106 aa9.4□□□□□ -0.9
PDLIM2-212ENST00000443561 Q6ZNX1 250 aa9.4□□□□□ -0.9
PDLIM2-212ENST00000443561 RNF182Q8N6D2 247 aa9.4□□□□□ -0.9
PDLIM2-212ENST00000443561 OR2T35Q8NGX2 323 aa9.4□□□□□ -0.9
PDLIM2-212ENST00000443561 SPATA25Q9BR10 227 aa9.4□□□□□ -0.9
PDLIM2-212ENST00000443561 PARD6GQ9BYG4 376 aaPredicted RBP9.4□□□□□ -0.9
PDLIM2-212ENST00000443561 CSMD3Q7Z407 3707 aa9.4□□□□□ -0.9
PDLIM2-212ENST00000443561 KIR2DL5BA0A0G2JN68 375 aa9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 KIR2DL5BA0A0G2JPC4 375 aa9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 A8MTW9 85 aa9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 H3BMM0 161 aa9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 H3BTX0 84 aa9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 COX7A2P2O60397 106 aa9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 MPDU1O75352 247 aa9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 EIF3GO75821 320 aaKnown RBP eCLIP9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 PSMB3P49720 205 aa9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 DEFB135Q30KP9 77 aa9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 C10orf113Q5VZT2 155 aa9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 KIR2DL5AQ8N109 375 aa9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 OR11H4Q8NGC9 324 aa9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 KIR2DL5BQ8NHK3 375 aa9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 ASB13Q8WXK3 278 aa9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 ZNF503Q96F45 646 aa9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 DNAJC4Q9NNZ3 241 aa9.39□□□□□ -0.91
PDLIM2-212ENST00000443561 STARD9Q9P2P6 4700 aa9.38□□□□□ -0.91
PDLIM2-212ENST00000443561 ELOA3CA0A087WX78 387 aaPredicted RBP9.38□□□□□ -0.91
PDLIM2-212ENST00000443561 ISLRO14498 428 aa9.38□□□□□ -0.91
PDLIM2-212ENST00000443561 HLA-DRB4P13762 266 aa9.38□□□□□ -0.91
PDLIM2-212ENST00000443561 GALR1P47211 349 aa9.38□□□□□ -0.91
PDLIM2-212ENST00000443561 CMC4P56277 68 aaPredicted RBP9.38□□□□□ -0.91
PDLIM2-212ENST00000443561 ACTL10Q5JWF8 245 aa9.38□□□□□ -0.91
PDLIM2-212ENST00000443561 MIR17HGQ75NE6 70 aa9.38□□□□□ -0.91
PDLIM2-212ENST00000443561 SAT2Q96F10 170 aaPredicted RBP9.38□□□□□ -0.91
PDLIM2-212ENST00000443561 GPR82Q96P67 336 aa9.38□□□□□ -0.91
PDLIM2-212ENST00000443561 SLC25A2Q9BXI2 301 aa9.38□□□□□ -0.91
PDLIM2-212ENST00000443561 HLA-DRB4X5D2U9 266 aa9.38□□□□□ -0.91
PDLIM2-212ENST00000443561 FXYD6-FXYD2A0A087WZ82 144 aa9.37□□□□□ -0.91
PDLIM2-212ENST00000443561 PYYP10082 97 aa9.37□□□□□ -0.91
PDLIM2-212ENST00000443561 RPL7P18124 248 aaKnown RBP9.37□□□□□ -0.91
PDLIM2-212ENST00000443561 RAB31Q13636 194 aa9.37□□□□□ -0.91
PDLIM2-212ENST00000443561 AMTNQ6UX39 209 aa9.37□□□□□ -0.91
PDLIM2-212ENST00000443561 ZNF709Q8N972 641 aa9.37□□□□□ -0.91
PDLIM2-212ENST00000443561 CSNK1G2-AS1Q8NCQ2 148 aa9.37□□□□□ -0.91
PDLIM2-212ENST00000443561 RNF183Q96D59 192 aa9.37□□□□□ -0.91
PDLIM2-212ENST00000443561 ST6GAL2Q96JF0 529 aa9.37□□□□□ -0.91
PDLIM2-212ENST00000443561 SAV1Q9H4B6 383 aaPredicted RBP9.37□□□□□ -0.91
PDLIM2-212ENST00000443561 ZNF331Q9NQX6 463 aaPredicted RBP9.37□□□□□ -0.91
PDLIM2-212ENST00000443561 ZNF586Q9NXT0 402 aa9.37□□□□□ -0.91
PDLIM2-212ENST00000443561 PFDN2Q9UHV9 154 aa9.37□□□□□ -0.91
PDLIM2-212ENST00000443561 A0A0J9YX75 114 aa9.36□□□□□ -0.91
PDLIM2-212ENST00000443561 NDUFB4O95168 129 aa9.36□□□□□ -0.91
PDLIM2-212ENST00000443561 ZNF705DP0CH99 300 aaPredicted RBP9.36□□□□□ -0.91
PDLIM2-212ENST00000443561 ZNF705BP0CI00 300 aaPredicted RBP9.36□□□□□ -0.91
PDLIM2-212ENST00000443561 MEOX2P50222 304 aa9.36□□□□□ -0.91
PDLIM2-212ENST00000443561 APOC4P55056 127 aa9.36□□□□□ -0.91
PDLIM2-212ENST00000443561 Q6ZRG5 221 aa9.36□□□□□ -0.91
PDLIM2-212ENST00000443561 Q6ZWC4 215 aa9.36□□□□□ -0.91
PDLIM2-212ENST00000443561 OR1L4Q8NGR5 311 aa9.36□□□□□ -0.91
PDLIM2-212ENST00000443561 GATAD1Q8WUU5 269 aa9.36□□□□□ -0.91
PDLIM2-212ENST00000443561 C16orf92Q96LL3 132 aa9.36□□□□□ -0.91
PDLIM2-212ENST00000443561 LINC00052Q96N35 136 aa9.36□□□□□ -0.91
PDLIM2-212ENST00000443561 CSTL1Q9H114 145 aa9.36□□□□□ -0.91
PDLIM2-212ENST00000443561 ZMAT4Q9H898 229 aa9.36□□□□□ -0.91
PDLIM2-212ENST00000443561 CA1P00915 261 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms