RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 GABARAPO95166 117 aa9.9□□□□□ -0.82
HMGN1-208ENST00000443046 M6PRP20645 277 aa9.9□□□□□ -0.82
HMGN1-208ENST00000443046 SURF2Q15527 256 aaPredicted RBP9.9□□□□□ -0.82
HMGN1-208ENST00000443046 IGFL4Q6B9Z1 124 aa9.9□□□□□ -0.82
HMGN1-208ENST00000443046 ZNF493Q6ZR52 646 aa9.9□□□□□ -0.82
HMGN1-208ENST00000443046 FRZBQ92765 325 aa9.9□□□□□ -0.82
HMGN1-208ENST00000443046 Q9H521 79 aa9.9□□□□□ -0.82
HMGN1-208ENST00000443046 NOP10Q9NPE3 64 aaKnown RBP9.9□□□□□ -0.82
HMGN1-208ENST00000443046 GPR132Q9UNW8 380 aa9.9□□□□□ -0.82
HMGN1-208ENST00000443046 DNAH8Q96JB1 4490 aa9.9□□□□□ -0.83
HMGN1-208ENST00000443046 TNFAIP8O95379 198 aa9.89□□□□□ -0.83
HMGN1-208ENST00000443046 RAB3DO95716 219 aa9.89□□□□□ -0.83
HMGN1-208ENST00000443046 CFDP00746 253 aaPredicted RBP9.89□□□□□ -0.83
HMGN1-208ENST00000443046 HOXA5P20719 270 aa9.89□□□□□ -0.83
HMGN1-208ENST00000443046 FUSP35637 526 aaKnown RBP eCLIP9.89□□□□□ -0.83
HMGN1-208ENST00000443046 TAS2R19P59542 299 aa9.89□□□□□ -0.83
HMGN1-208ENST00000443046 OR5I1Q13606 314 aa9.89□□□□□ -0.83
HMGN1-208ENST00000443046 GPR107Q5VW38 600 aa9.89□□□□□ -0.83
HMGN1-208ENST00000443046 RNF182Q8N6D2 247 aa9.89□□□□□ -0.83
HMGN1-208ENST00000443046 OR1B1Q8NGR6 318 aa9.89□□□□□ -0.83
HMGN1-208ENST00000443046 GPR82Q96P67 336 aa9.89□□□□□ -0.83
HMGN1-208ENST00000443046 SLC25A39Q9BZJ4 359 aaPredicted RBP9.89□□□□□ -0.83
HMGN1-208ENST00000443046 C14orf166Q9Y224 244 aaKnown RBP9.89□□□□□ -0.83
HMGN1-208ENST00000443046 CCR6P51684 374 aa9.88□□□□□ -0.83
HMGN1-208ENST00000443046 GGNBP1Q5YKI7 109 aa9.88□□□□□ -0.83
HMGN1-208ENST00000443046 STEAP1BQ6NZ63 245 aa9.88□□□□□ -0.83
HMGN1-208ENST00000443046 TMEM144Q7Z5S9 345 aa9.88□□□□□ -0.83
HMGN1-208ENST00000443046 OR10J6PQ8NGY7 276 aa9.88□□□□□ -0.83
HMGN1-208ENST00000443046 TMEM263Q8WUH6 116 aaKnown RBP9.88□□□□□ -0.83
HMGN1-208ENST00000443046 SLC25A22Q9H936 323 aa9.88□□□□□ -0.83
HMGN1-208ENST00000443046 A0A0J9YY99 117 aa9.87□□□□□ -0.83
HMGN1-208ENST00000443046 ZNF182P17025 639 aaPredicted RBP9.87□□□□□ -0.83
HMGN1-208ENST00000443046 KRTAP10-1P60331 282 aa9.87□□□□□ -0.83
HMGN1-208ENST00000443046 NCS1P62166 190 aa9.87□□□□□ -0.83
HMGN1-208ENST00000443046 SMCO1Q147U7 214 aa9.87□□□□□ -0.83
HMGN1-208ENST00000443046 TMEM182Q6ZP80 229 aaPredicted RBP9.87□□□□□ -0.83
HMGN1-208ENST00000443046 PTTG2Q9NZH5 202 aa9.87□□□□□ -0.83
HMGN1-208ENST00000443046 A0A0B4J2A0 478 aa9.86□□□□□ -0.83
HMGN1-208ENST00000443046 PRSS46E5RG02 174 aa9.86□□□□□ -0.83
HMGN1-208ENST00000443046 FAAP20Q6NZ36 180 aa9.86□□□□□ -0.83
HMGN1-208ENST00000443046 OR8A1Q8NGG7 326 aa9.86□□□□□ -0.83
HMGN1-208ENST00000443046 C18orf15Q96N68 181 aa9.86□□□□□ -0.83
HMGN1-208ENST00000443046 PRR13Q9NZ81 148 aa9.86□□□□□ -0.83
HMGN1-208ENST00000443046 SHPKQ9UHJ6 478 aa9.86□□□□□ -0.83
HMGN1-208ENST00000443046 FAM25AB3EWG3 89 aa9.85□□□□□ -0.83
HMGN1-208ENST00000443046 FAM25CB3EWG5 89 aa9.85□□□□□ -0.83
HMGN1-208ENST00000443046 FAM25GB3EWG6 89 aa9.85□□□□□ -0.83
HMGN1-208ENST00000443046 ADAP1O75689 374 aa9.85□□□□□ -0.83
HMGN1-208ENST00000443046 HTN1P15515 57 aa9.85□□□□□ -0.83
HMGN1-208ENST00000443046 CXCL3P19876 107 aa9.85□□□□□ -0.83
HMGN1-208ENST00000443046 HIST1H1AQ02539 215 aaPredicted RBP9.85□□□□□ -0.83
HMGN1-208ENST00000443046 SSBP1Q04837 148 aaKnown RBP9.85□□□□□ -0.83
HMGN1-208ENST00000443046 LYZL2Q7Z4W2 148 aa9.85□□□□□ -0.83
HMGN1-208ENST00000443046 ZNF738Q8NE65 137 aa9.85□□□□□ -0.83
HMGN1-208ENST00000443046 MDFICQ9P1T7 246 aa9.85□□□□□ -0.83
HMGN1-208ENST00000443046 A0A096LPF7 62 aa9.84□□□□□ -0.83
HMGN1-208ENST00000443046 H7BYZ3 331 aa9.84□□□□□ -0.83
HMGN1-208ENST00000443046 PITX3O75364 302 aa9.84□□□□□ -0.83
HMGN1-208ENST00000443046 ORM2P19652 201 aa9.84□□□□□ -0.83
HMGN1-208ENST00000443046 GATA2P23769 480 aaPredicted RBP9.84□□□□□ -0.83
HMGN1-208ENST00000443046 CDKN1BP46527 198 aa9.84□□□□□ -0.83
HMGN1-208ENST00000443046 ERVFC1-1P60608 527 aa9.84□□□□□ -0.83
HMGN1-208ENST00000443046 VBP1P61758 197 aa9.84□□□□□ -0.83
HMGN1-208ENST00000443046 C15orf40Q8WUR7 153 aa9.84□□□□□ -0.83
HMGN1-208ENST00000443046 VSIG2Q96IQ7 327 aa9.84□□□□□ -0.83
HMGN1-208ENST00000443046 C20orf144Q9BQM9 153 aa9.84□□□□□ -0.83
HMGN1-208ENST00000443046 EXTL2Q9UBQ6 330 aa9.84□□□□□ -0.83
HMGN1-208ENST00000443046 H3BRN7 92 aa9.83□□□□□ -0.84
HMGN1-208ENST00000443046 EREGO14944 169 aa9.83□□□□□ -0.84
HMGN1-208ENST00000443046 SMR3BP02814 79 aaPredicted RBP9.83□□□□□ -0.84
HMGN1-208ENST00000443046 RHOBP62745 196 aa9.83□□□□□ -0.84
HMGN1-208ENST00000443046 ICAM4Q14773 271 aa9.83□□□□□ -0.84
HMGN1-208ENST00000443046 PSG3Q16557 428 aa9.83□□□□□ -0.84
HMGN1-208ENST00000443046 MZT2AQ6P582 158 aa9.83□□□□□ -0.84
HMGN1-208ENST00000443046 BPIFCQ8NFQ6 507 aa9.83□□□□□ -0.84
HMGN1-208ENST00000443046 KCNIP3Q9Y2W7 256 aa9.83□□□□□ -0.84
HMGN1-208ENST00000443046 A0A087WTM6 91 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 A0A087X0K7 114 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 GAGE12BA1L429 117 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 DISC1C4P0D8 188 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 SIVA1O15304 175 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 GAGE7O76087 117 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 GAGE12FP0CL80 117 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 GAGE12GP0CL81 117 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 GAGE12IP0CL82 117 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 S100A7P31151 101 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 RAB11AP62491 216 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 FGL1Q08830 312 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 KIR3DS1Q14943 382 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 OR1S1Q8NH92 325 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 SHANK2-AS3Q9BTD1 123 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 TMEM147Q9BVK8 224 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 FUNDC2Q9BWH2 189 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 TNFRSF18Q9Y5U5 241 aa9.82□□□□□ -0.84
HMGN1-208ENST00000443046 LRP1Q07954 4544 aaKnown RBP9.81□□□□□ -0.84
HMGN1-208ENST00000443046 ATP6V1G2O95670 118 aa9.81□□□□□ -0.84
HMGN1-208ENST00000443046 RLN2P04090 185 aa9.81□□□□□ -0.84
HMGN1-208ENST00000443046 AKR1C4P17516 323 aa9.81□□□□□ -0.84
HMGN1-208ENST00000443046 RPL7P18124 248 aaKnown RBP9.81□□□□□ -0.84
HMGN1-208ENST00000443046 PRRT1Q99946 306 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms