RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 CREBBPQ92793 2442 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 A0A0U1RQK1 487 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 CGB1A6NKQ9 187 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 FCN1O00602 326 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 CLEC3BP05452 202 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 ATP6V0CP27449 155 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 KLF17Q5JT82 389 aaPredicted RBP6.42□□□□□ -1.38
CCDC39-201ENST00000442201 WFDC11Q8NEX6 87 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 FBXL7Q9UJT9 491 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 CNIH1O95406 144 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 PF4V1P10720 104 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 WT1-ASQ06250 92 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 C2orf83Q53S99 150 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 FAM120AOSQ5T036 256 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 FOXC2Q99958 501 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 SPATA25Q9BR10 227 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 PARLQ9H300 379 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 CSMD2Q7Z408 3487 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 UBE2L5PA0A1B0GUS4 154 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 RNASE2P10153 161 aaKnown RBP6.42□□□□□ -1.38
CCDC39-201ENST00000442201 SUB1P53999 127 aaKnown RBP eCLIP6.42□□□□□ -1.38
CCDC39-201ENST00000442201 LRRC75BQ2VPJ9 315 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 SRSF12Q8WXF0 261 aaKnown RBP6.42□□□□□ -1.38
CCDC39-201ENST00000442201 OR5B12Q96R08 314 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 RNF114Q9Y508 228 aa6.42□□□□□ -1.38
CCDC39-201ENST00000442201 A0A1B0GUS0 222 aa6.41□□□□□ -1.38
CCDC39-201ENST00000442201 TMEM189A5PLL7 270 aa6.41□□□□□ -1.38
CCDC39-201ENST00000442201 DIRC3C9JPN6 131 aa6.41□□□□□ -1.38
CCDC39-201ENST00000442201 RUNX1Q01196 453 aa6.41□□□□□ -1.38
CCDC39-201ENST00000442201 CST9LP1Q5W188 147 aa6.41□□□□□ -1.38
CCDC39-201ENST00000442201 WDR61Q9GZS3 305 aaKnown RBP6.41□□□□□ -1.38
CCDC39-201ENST00000442201 TNCP24821 2201 aa6.41□□□□□ -1.38
CCDC39-201ENST00000442201 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.41□□□□□ -1.38
CCDC39-201ENST00000442201 CD5LO43866 347 aa6.41□□□□□ -1.38
CCDC39-201ENST00000442201 Q0VG73 95 aa6.41□□□□□ -1.38
CCDC39-201ENST00000442201 VWC2Q2TAL6 325 aa6.41□□□□□ -1.38
CCDC39-201ENST00000442201 OR2G3Q8NGZ4 309 aa6.41□□□□□ -1.38
CCDC39-201ENST00000442201 TAF15Q92804 592 aaKnown RBP eCLIP6.41□□□□□ -1.38
CCDC39-201ENST00000442201 CCDC168Q8NDH2 2452 aa6.41□□□□□ -1.38
CCDC39-201ENST00000442201 HECTD1Q9ULT8 2610 aa6.41□□□□□ -1.38
CCDC39-201ENST00000442201 PRSS46E5RG02 174 aa6.4□□□□□ -1.38
CCDC39-201ENST00000442201 FXYD3Q14802 87 aa6.4□□□□□ -1.38
CCDC39-201ENST00000442201 ZNF562Q6V9R5 426 aa6.4□□□□□ -1.38
CCDC39-201ENST00000442201 SRSF8Q9BRL6 282 aaKnown RBP6.4□□□□□ -1.38
CCDC39-201ENST00000442201 GEMIN7Q9H840 131 aaKnown RBP6.4□□□□□ -1.38
CCDC39-201ENST00000442201 BCL2P10415 239 aa6.4□□□□□ -1.38
CCDC39-201ENST00000442201 CX3CL1P78423 397 aa6.4□□□□□ -1.38
CCDC39-201ENST00000442201 SMAGPQ0VAQ4 97 aa6.4□□□□□ -1.38
CCDC39-201ENST00000442201 BVES-AS1Q5T3Y7 98 aa6.4□□□□□ -1.38
CCDC39-201ENST00000442201 Q8N9W7 124 aa6.4□□□□□ -1.38
CCDC39-201ENST00000442201 CITED2Q99967 270 aaPredicted RBP6.4□□□□□ -1.38
CCDC39-201ENST00000442201 RASL11BQ9BPW5 248 aa6.4□□□□□ -1.38
CCDC39-201ENST00000442201 TRAV8-6A0A0B4J262 113 aa6.4□□□□□ -1.39
CCDC39-201ENST00000442201 A0A1B0GV50 99 aa6.4□□□□□ -1.39
CCDC39-201ENST00000442201 TEX22C9J3V5 150 aa6.4□□□□□ -1.39
CCDC39-201ENST00000442201 APELAP0DMC3 54 aa6.4□□□□□ -1.39
CCDC39-201ENST00000442201 AREGP15514 252 aa6.4□□□□□ -1.39
CCDC39-201ENST00000442201 OR8I2Q8N0Y5 310 aa6.4□□□□□ -1.39
CCDC39-201ENST00000442201 SSMEM1Q8WWF3 244 aa6.4□□□□□ -1.39
CCDC39-201ENST00000442201 PSMG3Q9BT73 122 aaPredicted RBP6.4□□□□□ -1.39
CCDC39-201ENST00000442201 NPVFQ9HCQ7 196 aa6.4□□□□□ -1.39
CCDC39-201ENST00000442201 PSG8Q9UQ74 426 aa6.4□□□□□ -1.39
CCDC39-201ENST00000442201 WDR83OSQ9Y284 106 aa6.4□□□□□ -1.39
CCDC39-201ENST00000442201 PRRC2AP48634 2157 aaKnown RBP6.39□□□□□ -1.39
CCDC39-201ENST00000442201 GPX1P07203 203 aa6.39□□□□□ -1.39
CCDC39-201ENST00000442201 RPL23P62829 140 aaKnown RBP6.39□□□□□ -1.39
CCDC39-201ENST00000442201 GTSF1LQ9H1H1 148 aa6.39□□□□□ -1.39
CCDC39-201ENST00000442201 TRAPPC1Q9Y5R8 145 aa6.39□□□□□ -1.39
CCDC39-201ENST00000442201 SOX21Q9Y651 276 aaPredicted RBP6.39□□□□□ -1.39
CCDC39-201ENST00000442201 FNDC10F2Z333 226 aa6.39□□□□□ -1.39
CCDC39-201ENST00000442201 SMAD7O15105 426 aaKnown RBP6.39□□□□□ -1.39
CCDC39-201ENST00000442201 ZNF253O75346 499 aa6.39□□□□□ -1.39
CCDC39-201ENST00000442201 MPDU1O75352 247 aa6.39□□□□□ -1.39
CCDC39-201ENST00000442201 HLA-DRB1P01911 266 aa6.39□□□□□ -1.39
CCDC39-201ENST00000442201 SERF2P84101 59 aa6.39□□□□□ -1.39
CCDC39-201ENST00000442201 HSD52Q0P140 79 aa6.39□□□□□ -1.39
CCDC39-201ENST00000442201 CD300EQ496F6 205 aaPredicted RBP6.39□□□□□ -1.39
CCDC39-201ENST00000442201 FFAR4Q5NUL3 377 aa6.39□□□□□ -1.39
CCDC39-201ENST00000442201 CIARTQ8N365 385 aaPredicted RBP6.39□□□□□ -1.39
CCDC39-201ENST00000442201 ZNF114Q8NC26 417 aa6.39□□□□□ -1.39
CCDC39-201ENST00000442201 PIFOQ8TCI5 191 aa6.39□□□□□ -1.39
CCDC39-201ENST00000442201 ARPC1AQ92747 370 aa6.39□□□□□ -1.39
CCDC39-201ENST00000442201 SLC25A33Q9BSK2 321 aa6.39□□□□□ -1.39
CCDC39-201ENST00000442201 SERF1AO75920 110 aa6.38□□□□□ -1.39
CCDC39-201ENST00000442201 ADMP35318 185 aa6.38□□□□□ -1.39
CCDC39-201ENST00000442201 CD69Q07108 199 aa6.38□□□□□ -1.39
CCDC39-201ENST00000442201 TREML4Q6UXN2 200 aa6.38□□□□□ -1.39
CCDC39-201ENST00000442201 FOXI2Q6ZQN5 318 aa6.38□□□□□ -1.39
CCDC39-201ENST00000442201 FAM103A1Q9BTL3 118 aaKnown RBP6.38□□□□□ -1.39
CCDC39-201ENST00000442201 MOB4Q9Y3A3 225 aa6.38□□□□□ -1.39
CCDC39-201ENST00000442201 TIMM9Q9Y5J7 89 aa6.38□□□□□ -1.39
CCDC39-201ENST00000442201 F11RQ9Y624 299 aaKnown RBP6.38□□□□□ -1.39
CCDC39-201ENST00000442201 TET2Q6N021 2002 aaPredicted RBP6.38□□□□□ -1.39
CCDC39-201ENST00000442201 TRAV34A0A0B4J273 112 aa6.38□□□□□ -1.39
CCDC39-201ENST00000442201 C17orf112F2Z3M2 114 aa6.38□□□□□ -1.39
CCDC39-201ENST00000442201 H3BUX3 64 aa6.38□□□□□ -1.39
CCDC39-201ENST00000442201 K7EQM0 130 aa6.38□□□□□ -1.39
CCDC39-201ENST00000442201 LINC00869P0C866 280 aa6.38□□□□□ -1.39
CCDC39-201ENST00000442201 OPRK1P41145 380 aa6.38□□□□□ -1.39
CCDC39-201ENST00000442201 PMCHL1Q16048 86 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms