RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 FOXA3P55318 350 aaPredicted RBP13.12□□□□□ -0.31
SEMA3B-207ENST00000441915 PLGLAQ15195 96 aa13.12□□□□□ -0.31
SEMA3B-207ENST00000441915 MAJINQ3KP22 176 aa13.12□□□□□ -0.31
SEMA3B-207ENST00000441915 TMEM14CQ9P0S9 112 aa13.12□□□□□ -0.31
SEMA3B-207ENST00000441915 TRAV9-2A0A087WT02 112 aa13.12□□□□□ -0.31
SEMA3B-207ENST00000441915 TRAV8-1A0A0A6YYK1 113 aa13.12□□□□□ -0.31
SEMA3B-207ENST00000441915 COX7A1P24310 79 aa13.12□□□□□ -0.31
SEMA3B-207ENST00000441915 HINT1P49773 126 aaPredicted RBP13.12□□□□□ -0.31
SEMA3B-207ENST00000441915 RBPJQ06330 500 aa13.12□□□□□ -0.31
SEMA3B-207ENST00000441915 PRR31Q5SQ13 230 aa13.12□□□□□ -0.31
SEMA3B-207ENST00000441915 APC2O95996 2303 aa13.12□□□□□ -0.31
SEMA3B-207ENST00000441915 M0QZ24 198 aa13.12□□□□□ -0.31
SEMA3B-207ENST00000441915 RBP4P02753 201 aa13.12□□□□□ -0.31
SEMA3B-207ENST00000441915 Q86TA4 180 aa13.12□□□□□ -0.31
SEMA3B-207ENST00000441915 PPIAL4CA0A0B4J2A2 164 aa13.11□□□□□ -0.31
SEMA3B-207ENST00000441915 CD3EP07766 207 aa13.11□□□□□ -0.31
SEMA3B-207ENST00000441915 PPIAL4GP0DN37 164 aa13.11□□□□□ -0.31
SEMA3B-207ENST00000441915 URB1-AS1Q96HZ7 61 aa13.11□□□□□ -0.31
SEMA3B-207ENST00000441915 TMEM70Q9BUB7 260 aa13.11□□□□□ -0.31
SEMA3B-207ENST00000441915 NPIPB6E9PJ23 425 aa13.11□□□□□ -0.31
SEMA3B-207ENST00000441915 LYNX1G3V0Z9 82 aa13.11□□□□□ -0.31
SEMA3B-207ENST00000441915 I3L2K1 104 aa13.11□□□□□ -0.31
SEMA3B-207ENST00000441915 LYNX1P0DP58 116 aa13.11□□□□□ -0.31
SEMA3B-207ENST00000441915 EXOC3-AS1Q8N2X6 119 aa13.11□□□□□ -0.31
SEMA3B-207ENST00000441915 CHEK1O14757 476 aa13.1□□□□□ -0.31
SEMA3B-207ENST00000441915 TSPOP30536 169 aa13.1□□□□□ -0.31
SEMA3B-207ENST00000441915 GOLT1AQ6ZVE7 132 aa13.1□□□□□ -0.31
SEMA3B-207ENST00000441915 PRNTQ86SH4 94 aa13.1□□□□□ -0.31
SEMA3B-207ENST00000441915 CIARTQ8N365 385 aaPredicted RBP13.1□□□□□ -0.31
SEMA3B-207ENST00000441915 CHCHD1Q96BP2 118 aaKnown RBP13.1□□□□□ -0.31
SEMA3B-207ENST00000441915 RNF5Q99942 180 aa13.1□□□□□ -0.31
SEMA3B-207ENST00000441915 MRPS16Q9Y3D3 137 aaKnown RBP13.1□□□□□ -0.31
SEMA3B-207ENST00000441915 ZZEF1O43149 2961 aa13.1□□□□□ -0.31
SEMA3B-207ENST00000441915 TRAV30A0A087WSZ9 112 aa13.1□□□□□ -0.31
SEMA3B-207ENST00000441915 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.1□□□□□ -0.31
SEMA3B-207ENST00000441915 CD24P25063 80 aa13.1□□□□□ -0.31
SEMA3B-207ENST00000441915 CSTL1Q9H114 145 aa13.1□□□□□ -0.31
SEMA3B-207ENST00000441915 ZFHX2Q9C0A1 2572 aaPredicted RBP13.09□□□□□ -0.31
SEMA3B-207ENST00000441915 TOX4O94842 621 aa13.09□□□□□ -0.31
SEMA3B-207ENST00000441915 CNIH1O95406 144 aa13.09□□□□□ -0.31
SEMA3B-207ENST00000441915 CLEC2AQ6UVW9 174 aa13.09□□□□□ -0.31
SEMA3B-207ENST00000441915 CLEC5AQ9NY25 188 aa13.09□□□□□ -0.31
SEMA3B-207ENST00000441915 SCNM1Q9BWG6 230 aa13.09□□□□□ -0.31
SEMA3B-207ENST00000441915 IGKV1-17P01599 117 aa13.08□□□□□ -0.32
SEMA3B-207ENST00000441915 IGLV2-11P01706 119 aa13.08□□□□□ -0.32
SEMA3B-207ENST00000441915 IGLL1P15814 213 aa13.08□□□□□ -0.32
SEMA3B-207ENST00000441915 BPIFA4PQ86YQ2 179 aa13.08□□□□□ -0.32
SEMA3B-207ENST00000441915 KIR3DL3Q8N743 410 aa13.08□□□□□ -0.32
SEMA3B-207ENST00000441915 SRSF8Q9BRL6 282 aaKnown RBP13.08□□□□□ -0.32
SEMA3B-207ENST00000441915 NDFIP1Q9BT67 221 aa13.08□□□□□ -0.32
SEMA3B-207ENST00000441915 RNF24Q9Y225 148 aa13.08□□□□□ -0.32
SEMA3B-207ENST00000441915 CIDEAO60543 219 aa13.08□□□□□ -0.32
SEMA3B-207ENST00000441915 LOC102724200A0A096LPH7 203 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-207ENST00000441915 IGHV1-24A0A0C4DH33 117 aa13.07□□□□□ -0.32
SEMA3B-207ENST00000441915 SH2D7A6NKC9 451 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-207ENST00000441915 CRXO43186 299 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-207ENST00000441915 LEPROTL1O95214 131 aa13.07□□□□□ -0.32
SEMA3B-207ENST00000441915 PRR30Q53SZ7 412 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-207ENST00000441915 OR4F17Q8NGA8 305 aa13.07□□□□□ -0.32
SEMA3B-207ENST00000441915 HAX1O00165 279 aa13.07□□□□□ -0.32
SEMA3B-207ENST00000441915 HOXB4P17483 251 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-207ENST00000441915 S100A7P31151 101 aa13.07□□□□□ -0.32
SEMA3B-207ENST00000441915 OCIAD2Q56VL3 154 aa13.07□□□□□ -0.32
SEMA3B-207ENST00000441915 MUC15Q8N387 334 aa13.07□□□□□ -0.32
SEMA3B-207ENST00000441915 TMEM190Q8WZ59 177 aa13.07□□□□□ -0.32
SEMA3B-207ENST00000441915 CST9LQ9H4G1 147 aa13.07□□□□□ -0.32
SEMA3B-207ENST00000441915 TRBV19A0A075B6N1 114 aa13.06□□□□□ -0.32
SEMA3B-207ENST00000441915 TCF15Q12870 199 aa13.06□□□□□ -0.32
SEMA3B-207ENST00000441915 LDLRAD2Q5SZI1 272 aa13.06□□□□□ -0.32
SEMA3B-207ENST00000441915 FAM120AOSQ5T036 256 aa13.06□□□□□ -0.32
SEMA3B-207ENST00000441915 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.06□□□□□ -0.32
SEMA3B-207ENST00000441915 TRBV6-1A0A0K0K1D8 114 aa13.06□□□□□ -0.32
SEMA3B-207ENST00000441915 OR4C46A6NHA9 309 aa13.06□□□□□ -0.32
SEMA3B-207ENST00000441915 TMEM238C9JI98 176 aa13.06□□□□□ -0.32
SEMA3B-207ENST00000441915 LY6LH3BQJ8 138 aa13.06□□□□□ -0.32
SEMA3B-207ENST00000441915 VAMP3Q15836 100 aa13.06□□□□□ -0.32
SEMA3B-207ENST00000441915 SHANK2-AS3Q9BTD1 123 aa13.06□□□□□ -0.32
SEMA3B-207ENST00000441915 ONECUT1Q9UBC0 465 aa13.06□□□□□ -0.32
SEMA3B-207ENST00000441915 K7EIM0 57 aa13.05□□□□□ -0.32
SEMA3B-207ENST00000441915 K7EQM0 130 aa13.05□□□□□ -0.32
SEMA3B-207ENST00000441915 TIMM23O14925 209 aa13.05□□□□□ -0.32
SEMA3B-207ENST00000441915 RPS20P60866 119 aaKnown RBP13.05□□□□□ -0.32
SEMA3B-207ENST00000441915 SPATA12Q7Z6I5 190 aa13.05□□□□□ -0.32
SEMA3B-207ENST00000441915 SVIPQ8NHG7 77 aa13.05□□□□□ -0.32
SEMA3B-207ENST00000441915 TMEM75Q8N9X5 138 aa13.05□□□□□ -0.32
SEMA3B-207ENST00000441915 VKORC1Q9BQB6 163 aa13.05□□□□□ -0.32
SEMA3B-207ENST00000441915 C1RLQ9NZP8 487 aa13.05□□□□□ -0.32
SEMA3B-207ENST00000441915 A0A1B0GUT8 65 aa13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 HSBP1L1C9JCN9 74 aa13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 H3BRN7 92 aa13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 SYS1-DBNDD2H3BUS1 97 aa13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 TACC2O95359 2948 aa13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 APOHP02749 345 aaPredicted RBP13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 C16orf54Q6UWD8 224 aa13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 LIPFP07098 398 aa13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 RHOGP84095 191 aa13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 LYPD1Q8N2G4 141 aa13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 LINC01560Q8TB33 94 aa13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 RNF125Q96EQ8 232 aa13.04□□□□□ -0.32
SEMA3B-207ENST00000441915 ZC2HC1AQ96GY0 325 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms