RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 ZNF90Q03938 601 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 AKR1C1Q04828 323 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 ZNF266Q14584 549 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 C15orf32Q32M92 178 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 MIC13Q5XKP0 118 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 LGALS9CQ6DKI2 356 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 ACSM6Q6P461 480 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 C18orf65Q6ZTR6 163 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 THAP8Q8NA92 274 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 TMEM116Q8NCL8 245 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 ZNF680Q8NEM1 530 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 OR1L6Q8NGR2 347 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 OR4X1Q8NH49 305 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 ZNF502Q8TBZ5 544 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 MYOZ3Q8TDC0 251 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 PCNPQ8WW12 178 aaKnown RBP3.6□□□□□ -1.83
PTPN4-206ENST00000441089 TMED6Q8WW62 240 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 ACY3Q96HD9 319 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 SLC35E1Q96K37 410 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 NPCDR1Q9BY65 106 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 SLC25A32Q9H2D1 315 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 NPVFQ9HCQ7 196 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 ZNF355PQ9NSJ1 428 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 PKD1P98161 4303 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 DNAH17Q9UFH2 4485 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 FAT2Q9NYQ8 4349 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 A0A1B0GVY2 172 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 PSMB11A5LHX3 300 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 AGPAT2O15120 278 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 EIF3GO75821 320 aaKnown RBP eCLIP3.59□□□□□ -1.83
PTPN4-206ENST00000441089 TRBV12-3P01733 135 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 IGHV3-11P01762 117 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 SEC11BP0C7V7 166 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 CAMLGP49069 296 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 FHITP49789 147 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 SULT1A2P50226 295 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 RAB9AP51151 201 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 TPPP2P59282 170 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 RAB2AP61019 212 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 ZNF726P1Q15940 193 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 TIGITQ495A1 244 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 GCSAMLQ5JQS6 135 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 ETFRF1Q6IPR1 90 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 CLEC19AQ6UXS0 136 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 CYP2G1PQ6ZSU1 146 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 SSX7Q7RTT5 188 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 COMMD1Q8N668 190 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 MAPKAPK5-AS1Q8N8E1 139 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 ZNF491Q8N8L2 437 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 RNF152Q8N8N0 203 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 NECAP1Q8NC96 275 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 BPIFCQ8NFQ6 507 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 OR2G3Q8NGZ4 309 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 SCGB1C1Q8TD33 95 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 VN1R17PQ8TDU5 208 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 PHYHIPLQ96FC7 376 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 TRGV9Q99603 122 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 PSMG3Q9BT73 122 aaPredicted RBP3.59□□□□□ -1.83
PTPN4-206ENST00000441089 CHRDL1Q9BU40 450 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 C21orf62Q9NYP8 219 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 KLK5Q9Y337 293 aaPredicted RBP3.59□□□□□ -1.83
PTPN4-206ENST00000441089 TIMM9Q9Y5J7 89 aa3.59□□□□□ -1.83
PTPN4-206ENST00000441089 DYNC1H1Q14204 4646 aaKnown RBP3.59□□□□□ -1.83
PTPN4-206ENST00000441089 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.58□□□□□ -1.84
PTPN4-206ENST00000441089 IGHV3-35A0A0C4DH35 117 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 CXorf65A6NEN9 183 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 OR2T8A6NH00 312 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 FAM223BA6NKX1 122 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 ZFP92A6NM28 416 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 ZNF785A8K8V0 405 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 PPP5D1E7EU14 171 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 TRIAP1O43715 76 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 GNG7O60262 68 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 MPDU1O75352 247 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 CLEC3BP05452 202 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 CTSGP08311 255 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 NMBP08949 121 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 IGHV4-30-4P0DP06 118 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 PSG1P11464 419 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 GP9P14770 177 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 FCGR2BP31994 310 aaPredicted RBP3.58□□□□□ -1.84
PTPN4-206ENST00000441089 GPR183P32249 361 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 RPL29P47914 159 aaKnown RBP3.58□□□□□ -1.84
PTPN4-206ENST00000441089 NPBWR1P48145 328 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 MFAP4P55083 255 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 B2MP61769 119 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 EIF5AP63241 154 aaKnown RBP3.58□□□□□ -1.84
PTPN4-206ENST00000441089 SLC35B1P78383 322 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 ATP5G2Q06055 141 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 HAGHQ16775 308 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 Q56UQ5 140 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 FFAR4Q5NUL3 377 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 MORN5Q5VZ52 161 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 SPATA31B1PQ5VZV4 182 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 ZNF343Q6P1L6 599 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 TEX38Q6PEX7 206 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 PATE2Q6UY27 113 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 ZNF767PQ75MW2 155 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 FAM223AQ8IWN6 122 aa3.58□□□□□ -1.84
PTPN4-206ENST00000441089 EEF1AKMT3Q96AZ1 226 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms