RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 TMEM213A2RRL7 107 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 OR4C46A6NHA9 309 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 C2orf70A6NJV1 201 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 ZNF207O43670 478 aaKnown RBP3.8□□□□□ -1.8
CCDC140-202ENST00000440903 OR7C2O60412 319 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 SEC11BP0C7V7 166 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 FOLR2P14207 255 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 M6PRP20645 277 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 GATA2P23769 480 aaPredicted RBP3.8□□□□□ -1.8
CCDC140-202ENST00000440903 CDC34P49427 236 aaPredicted RBP3.8□□□□□ -1.8
CCDC140-202ENST00000440903 RAB5CP51148 216 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 PLP1P60201 277 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 USF2Q15853 346 aaPredicted RBP3.8□□□□□ -1.8
CCDC140-202ENST00000440903 TMEM41BQ5BJD5 291 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 C1orf194Q5T5A4 169 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 FAM78BQ5VT40 261 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 HIST2H2BDQ6DRA6 164 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 FAM122CQ6P4D5 195 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 UNQ9165/PRO28630Q6UXU0 137 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 DPPA3Q6W0C5 159 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 SIGLEC15Q6ZMC9 328 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 TMEM182Q6ZP80 229 aaPredicted RBP3.8□□□□□ -1.8
CCDC140-202ENST00000440903 LINC00305Q7Z4B0 112 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 GTSCR1Q86UQ5 136 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 BPIFA4PQ86YQ2 179 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 IQCF2Q8IXL9 164 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 OR11H4Q8NGC9 324 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 OR10G4Q8NGN3 311 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 OR10G9Q8NGN4 311 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 OR10G7Q8NGN6 311 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 LRRC20Q8TCA0 184 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 ST8SIA2Q92186 375 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 PHYHIPLQ96FC7 376 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 RSG1Q9BU20 258 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 RHPN1-AS1Q9BWJ2 59 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 ACTR3CQ9C0K3 210 aaPredicted RBP3.8□□□□□ -1.8
CCDC140-202ENST00000440903 SLC25A32Q9H2D1 315 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 SLC25A22Q9H936 323 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 SIGLEC8Q9NYZ4 499 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 FUT9Q9Y231 359 aa3.8□□□□□ -1.8
CCDC140-202ENST00000440903 PLXNB1O43157 2135 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 IGHV3OR16-8A0A075B7F1 116 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 ZNF785A8K8V0 405 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 H3BRN7 92 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 BOLA2-SMG1P6H3BVE0 249 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 DNASE2O00115 360 aaPredicted RBP3.79□□□□□ -1.8
CCDC140-202ENST00000440903 IFNA1P01562 189 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 IFNA7P01567 189 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 HBE1P02100 147 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 C8orf88P0DMB2 117 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 CBLN1P23435 193 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 CRYBB3P26998 211 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 ID1P41134 155 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 NKX2-5P52952 324 aaPredicted RBP3.79□□□□□ -1.8
CCDC140-202ENST00000440903 CMC4P56277 68 aaPredicted RBP3.79□□□□□ -1.8
CCDC140-202ENST00000440903 RAB14P61106 215 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 UBE2L3P68036 154 aaKnown RBP3.79□□□□□ -1.8
CCDC140-202ENST00000440903 GUCA2BQ16661 112 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 GUK1Q16774 197 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 LGALSLQ3ZCW2 172 aaPredicted RBP3.79□□□□□ -1.8
CCDC140-202ENST00000440903 TM4SF20Q53R12 229 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 FAM74A1Q5RGS3 127 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 LCN15Q6UWW0 184 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 TCF24Q7RTU0 167 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 FAM213BQ8TBF2 198 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 RNF141Q8WVD5 230 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 TMED6Q8WW62 240 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 SPAG8Q99932 426 aaPredicted RBP3.79□□□□□ -1.8
CCDC140-202ENST00000440903 SHANK2-AS3Q9BTD1 123 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 SCRT1Q9BWW7 348 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 SLC25A39Q9BZJ4 359 aaPredicted RBP3.79□□□□□ -1.8
CCDC140-202ENST00000440903 SH3BGRL3Q9H299 93 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 AAMDCQ9H7C9 122 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 WFDC1Q9HC57 220 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 DNAJC4Q9NNZ3 241 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 CLEC5AQ9NY25 188 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 SMPXQ9UHP9 88 aa3.79□□□□□ -1.8
CCDC140-202ENST00000440903 SVEP1Q4LDE5 3571 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 IGHV3OR16-13A0A075B7E8 117 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 IGHV3-49A0A0A0MS15 119 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 IGHV3-74A0A0B4J1X5 117 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 TRAV2A0A0B4J234 112 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 IGHV3-66A0A0C4DH42 116 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 CTXND1A0A1B0GTU2 59 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 MAP1LC3B2A6NCE7 125 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 ZNF98A6NK75 572 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 CHEK1O14757 476 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 RGS13O14921 159 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 BUB3O43684 328 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 CXorf1O96002 111 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 CSN3P07498 182 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 SPP1P10451 314 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 PPT1P50897 306 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 SNRPD3P62318 126 aaKnown RBP3.78□□□□□ -1.8
CCDC140-202ENST00000440903 CD300CQ08708 224 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 PQLC2Q6ZP29 291 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 UHRF2Q96PU4 802 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 SLC50A1Q9BRV3 221 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 MAP1LC3BQ9GZQ8 125 aa3.78□□□□□ -1.8
CCDC140-202ENST00000440903 VSIRQ9H7M9 311 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms