RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 NKX6-2Q9C056 277 aaPredicted RBP14.69□□□□□ -0.06
SNX17-203ENST00000440760 SETD2Q9BYW2 2564 aaPredicted RBP14.69□□□□□ -0.06
SNX17-203ENST00000440760 F8P00451 2351 aa14.69□□□□□ -0.06
SNX17-203ENST00000440760 IGHV3OR16-13A0A075B7E8 117 aa14.69□□□□□ -0.06
SNX17-203ENST00000440760 IGHV3-49A0A0A0MS15 119 aa14.69□□□□□ -0.06
SNX17-203ENST00000440760 IGHV3-74A0A0B4J1X5 117 aa14.69□□□□□ -0.06
SNX17-203ENST00000440760 H3BQ15 152 aa14.69□□□□□ -0.06
SNX17-203ENST00000440760 UNQ9165/PRO28630Q6UXU0 137 aa14.69□□□□□ -0.06
SNX17-203ENST00000440760 STXBP6Q8NFX7 210 aa14.69□□□□□ -0.06
SNX17-203ENST00000440760 IGHV3-66A0A0C4DH42 116 aa14.68□□□□□ -0.06
SNX17-203ENST00000440760 TMEM89A2RUT3 159 aa14.68□□□□□ -0.06
SNX17-203ENST00000440760 KLHDC1Q8N7A1 406 aa14.68□□□□□ -0.06
SNX17-203ENST00000440760 PARLQ9H300 379 aa14.68□□□□□ -0.06
SNX17-203ENST00000440760 CYSRT1A8MQ03 144 aa14.67□□□□□ -0.06
SNX17-203ENST00000440760 TMEM250H0YL14 139 aa14.67□□□□□ -0.06
SNX17-203ENST00000440760 ELANEP08246 267 aa14.67□□□□□ -0.06
SNX17-203ENST00000440760 NBEAP1P0C6P0 100 aa14.67□□□□□ -0.06
SNX17-203ENST00000440760 ZNF586Q9NXT0 402 aa14.67□□□□□ -0.06
SNX17-203ENST00000440760 PDE6DO43924 150 aa14.67□□□□□ -0.06
SNX17-203ENST00000440760 APOHP02749 345 aaPredicted RBP14.67□□□□□ -0.06
SNX17-203ENST00000440760 FOSL1P15407 271 aa14.67□□□□□ -0.06
SNX17-203ENST00000440760 RANP62826 216 aaKnown RBP14.67□□□□□ -0.06
SNX17-203ENST00000440760 SUMO1P63165 101 aaKnown RBP14.67□□□□□ -0.06
SNX17-203ENST00000440760 SRSF2Q01130 221 aaKnown RBP14.67□□□□□ -0.06
SNX17-203ENST00000440760 LINC00518Q8N0U6 118 aa14.67□□□□□ -0.06
SNX17-203ENST00000440760 MYOZ3Q8TDC0 251 aa14.67□□□□□ -0.06
SNX17-203ENST00000440760 C17orf77Q96MU5 243 aa14.67□□□□□ -0.06
SNX17-203ENST00000440760 TMEM14CQ9P0S9 112 aa14.67□□□□□ -0.06
SNX17-203ENST00000440760 ARL2-SNX15V9GYD0 113 aa14.67□□□□□ -0.06
SNX17-203ENST00000440760 A0A1W2PRE2 83 aa14.66□□□□□ -0.06
SNX17-203ENST00000440760 MRPS12O15235 138 aaKnown RBP14.66□□□□□ -0.06
SNX17-203ENST00000440760 NDUFB4O95168 129 aa14.66□□□□□ -0.06
SNX17-203ENST00000440760 CRYBA1P05813 215 aa14.66□□□□□ -0.06
SNX17-203ENST00000440760 BPIFA4PQ86YQ2 179 aa14.66□□□□□ -0.06
SNX17-203ENST00000440760 SMIM7Q9BQ49 75 aa14.66□□□□□ -0.06
SNX17-203ENST00000440760 PEF1Q9UBV8 284 aaKnown RBP14.66□□□□□ -0.06
SNX17-203ENST00000440760 ZNF727A8MUV8 499 aa14.65□□□□□ -0.06
SNX17-203ENST00000440760 M0R036 132 aa14.65□□□□□ -0.06
SNX17-203ENST00000440760 AWAT1Q58HT5 328 aa14.65□□□□□ -0.06
SNX17-203ENST00000440760 C18orf65Q6ZTR6 163 aa14.65□□□□□ -0.06
SNX17-203ENST00000440760 ELOVL1Q9BW60 279 aa14.65□□□□□ -0.06
SNX17-203ENST00000440760 F6UZH7 168 aa14.65□□□□□ -0.06
SNX17-203ENST00000440760 IGLC2P0DOY2 106 aa14.65□□□□□ -0.06
SNX17-203ENST00000440760 AKR1C3P42330 323 aa14.65□□□□□ -0.06
SNX17-203ENST00000440760 FAM74A3Q4VXF1 159 aa14.65□□□□□ -0.06
SNX17-203ENST00000440760 RNF152Q8N8N0 203 aa14.65□□□□□ -0.06
SNX17-203ENST00000440760 NIPSNAP3BQ9BS92 247 aa14.65□□□□□ -0.06
SNX17-203ENST00000440760 SLC17A3O00476 420 aa14.64□□□□□ -0.07
SNX17-203ENST00000440760 SNAPINO95295 136 aa14.64□□□□□ -0.07
SNX17-203ENST00000440760 HIST1H1EP10412 219 aaKnown RBP14.64□□□□□ -0.07
SNX17-203ENST00000440760 CRYBB3P26998 211 aa14.64□□□□□ -0.07
SNX17-203ENST00000440760 TCTEX1D4Q5JR98 221 aa14.64□□□□□ -0.07
SNX17-203ENST00000440760 OR4F17Q8NGA8 305 aa14.64□□□□□ -0.07
SNX17-203ENST00000440760 METTL26Q96S19 204 aa14.64□□□□□ -0.07
SNX17-203ENST00000440760 TXNDC17Q9BRA2 123 aa14.64□□□□□ -0.07
SNX17-203ENST00000440760 NDUFA4O00483 81 aa14.64□□□□□ -0.07
SNX17-203ENST00000440760 GGCTO75223 188 aaKnown RBP14.64□□□□□ -0.07
SNX17-203ENST00000440760 PRB4P10163 310 aaPredicted RBP14.64□□□□□ -0.07
SNX17-203ENST00000440760 S100A7AQ86SG5 101 aa14.64□□□□□ -0.07
SNX17-203ENST00000440760 OR8I2Q8N0Y5 310 aa14.64□□□□□ -0.07
SNX17-203ENST00000440760 GNG5P63218 68 aa14.63□□□□□ -0.07
SNX17-203ENST00000440760 KHDC1LQ5JSQ8 128 aa14.63□□□□□ -0.07
SNX17-203ENST00000440760 FAM209BQ5JX69 171 aa14.63□□□□□ -0.07
SNX17-203ENST00000440760 Q9H3A6 140 aa14.63□□□□□ -0.07
SNX17-203ENST00000440760 ZNF320A2RRD8 509 aa14.62□□□□□ -0.07
SNX17-203ENST00000440760 BUB3O43684 328 aa14.62□□□□□ -0.07
SNX17-203ENST00000440760 LGALS1P09382 135 aaKnown RBP14.62□□□□□ -0.07
SNX17-203ENST00000440760 TMEM190Q8WZ59 177 aa14.62□□□□□ -0.07
SNX17-203ENST00000440760 C11orf52Q96A22 123 aa14.62□□□□□ -0.07
SNX17-203ENST00000440760 RPH3ALQ9UNE2 315 aa14.62□□□□□ -0.07
SNX17-203ENST00000440760 TRBV19A0A075B6N1 114 aa14.62□□□□□ -0.07
SNX17-203ENST00000440760 PGPEP1LA6NFU8 196 aa14.62□□□□□ -0.07
SNX17-203ENST00000440760 NDUFS6O75380 124 aaKnown RBP14.62□□□□□ -0.07
SNX17-203ENST00000440760 MYCNOSP40205 109 aa14.62□□□□□ -0.07
SNX17-203ENST00000440760 DEFB136Q30KP8 78 aa14.62□□□□□ -0.07
SNX17-203ENST00000440760 EXOC3-AS1Q8N2X6 119 aa14.62□□□□□ -0.07
SNX17-203ENST00000440760 C11orf44Q8N8P7 122 aa14.62□□□□□ -0.07
SNX17-203ENST00000440760 UBE2E2Q96LR5 201 aa14.62□□□□□ -0.07
SNX17-203ENST00000440760 SMAD5-AS1Q9Y6J3 95 aa14.62□□□□□ -0.07
SNX17-203ENST00000440760 TRBV20OR9-2A0A075B6H5 130 aa14.61□□□□□ -0.07
SNX17-203ENST00000440760 IGHV4OR15-8A0A075B7B6 117 aa14.61□□□□□ -0.07
SNX17-203ENST00000440760 A0A087WW49 117 aa14.61□□□□□ -0.07
SNX17-203ENST00000440760 RPL7P18124 248 aaKnown RBP14.61□□□□□ -0.07
SNX17-203ENST00000440760 EDN2P20800 178 aa14.61□□□□□ -0.07
SNX17-203ENST00000440760 LINC01006Q8NI28 216 aa14.61□□□□□ -0.07
SNX17-203ENST00000440760 TVP23CQ96ET8 276 aa14.61□□□□□ -0.07
SNX17-203ENST00000440760 PGPA6NDG6 321 aa14.6□□□□□ -0.07
SNX17-203ENST00000440760 SLC25A5P05141 298 aaKnown RBP14.6□□□□□ -0.07
SNX17-203ENST00000440760 CTAG1AP78358 180 aa14.6□□□□□ -0.07
SNX17-203ENST00000440760 TMEM88Q6PEY1 159 aa14.6□□□□□ -0.07
SNX17-203ENST00000440760 SDF2L1Q9HCN8 221 aa14.6□□□□□ -0.07
SNX17-203ENST00000440760 AURKAIP1Q9NWT8 199 aaPredicted RBP14.6□□□□□ -0.07
SNX17-203ENST00000440760 SELENOKQ9Y6D0 94 aa14.6□□□□□ -0.07
SNX17-203ENST00000440760 RPL35P42766 123 aaKnown RBP14.59□□□□□ -0.07
SNX17-203ENST00000440760 RPEL1Q2QD12 228 aa14.59□□□□□ -0.07
SNX17-203ENST00000440760 TM4SF20Q53R12 229 aa14.59□□□□□ -0.07
SNX17-203ENST00000440760 CBLN2Q8IUK8 224 aa14.59□□□□□ -0.07
SNX17-203ENST00000440760 C2CD4CQ8TF44 421 aa14.59□□□□□ -0.07
SNX17-203ENST00000440760 WIPF2Q8TF74 440 aaPredicted RBP14.59□□□□□ -0.07
SNX17-203ENST00000440760 LINC00479Q96M42 142 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms