RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 LINC00854A0A1B0GVQ3 168 aa11.66□□□□□ -0.54
SNRPD3-204ENST00000439775 IL5P05113 134 aa11.66□□□□□ -0.54
SNRPD3-204ENST00000439775 SPART-AS1P0CW21 52 aa11.66□□□□□ -0.54
SNRPD3-204ENST00000439775 TAS2R30P59541 319 aa11.66□□□□□ -0.54
SNRPD3-204ENST00000439775 PLP1P60201 277 aa11.66□□□□□ -0.54
SNRPD3-204ENST00000439775 SELENOTP62341 195 aa11.66□□□□□ -0.54
SNRPD3-204ENST00000439775 IAH1Q2TAA2 248 aaPredicted RBP11.66□□□□□ -0.54
SNRPD3-204ENST00000439775 GSG1LQ6UXU4 331 aa11.66□□□□□ -0.54
SNRPD3-204ENST00000439775 ZNF767PQ75MW2 155 aa11.66□□□□□ -0.54
SNRPD3-204ENST00000439775 MITD1Q8WV92 249 aa11.66□□□□□ -0.54
SNRPD3-204ENST00000439775 SHANK2-AS3Q9BTD1 123 aa11.66□□□□□ -0.54
SNRPD3-204ENST00000439775 SCRT1Q9BWW7 348 aa11.66□□□□□ -0.54
SNRPD3-204ENST00000439775 SLC25A39Q9BZJ4 359 aaPredicted RBP11.66□□□□□ -0.54
SNRPD3-204ENST00000439775 GOLT1BQ9Y3E0 138 aa11.66□□□□□ -0.54
SNRPD3-204ENST00000439775 IGHV3OR16-12A0A075B7B8 117 aa11.65□□□□□ -0.54
SNRPD3-204ENST00000439775 K7EPK0 472 aa11.65□□□□□ -0.54
SNRPD3-204ENST00000439775 TSC22D2O75157 780 aa11.65□□□□□ -0.54
SNRPD3-204ENST00000439775 LINC00869P0C866 280 aa11.65□□□□□ -0.54
SNRPD3-204ENST00000439775 RAP2BP61225 183 aa11.65□□□□□ -0.54
SNRPD3-204ENST00000439775 HIGD1AQ9Y241 93 aa11.65□□□□□ -0.54
SNRPD3-204ENST00000439775 HYPMO75409 117 aa11.64□□□□□ -0.55
SNRPD3-204ENST00000439775 CCNKO75909 580 aa11.64□□□□□ -0.55
SNRPD3-204ENST00000439775 METTL15P1P0C7V9 234 aa11.64□□□□□ -0.55
SNRPD3-204ENST00000439775 RPL7P18124 248 aaKnown RBP11.64□□□□□ -0.55
SNRPD3-204ENST00000439775 AMTNQ6UX39 209 aa11.64□□□□□ -0.55
SNRPD3-204ENST00000439775 S100A7AQ86SG5 101 aa11.64□□□□□ -0.55
SNRPD3-204ENST00000439775 C1orf158Q8N1D5 194 aa11.64□□□□□ -0.55
SNRPD3-204ENST00000439775 ZBTB8BQ8NAP8 495 aaPredicted RBP11.64□□□□□ -0.55
SNRPD3-204ENST00000439775 OR10P1Q8NGE3 313 aa11.64□□□□□ -0.55
SNRPD3-204ENST00000439775 C20orf85Q9H1P6 137 aa11.64□□□□□ -0.55
SNRPD3-204ENST00000439775 NPVFQ9HCQ7 196 aa11.64□□□□□ -0.55
SNRPD3-204ENST00000439775 DKK2Q9UBU2 259 aa11.64□□□□□ -0.55
SNRPD3-204ENST00000439775 RCL1Q9Y2P8 373 aaKnown RBP11.64□□□□□ -0.55
SNRPD3-204ENST00000439775 TRAV8-2A0A0B4J237 113 aa11.63□□□□□ -0.55
SNRPD3-204ENST00000439775 SCGB1D2O95969 90 aa11.63□□□□□ -0.55
SNRPD3-204ENST00000439775 HBE1P02100 147 aa11.63□□□□□ -0.55
SNRPD3-204ENST00000439775 EMP1P54849 157 aa11.63□□□□□ -0.55
SNRPD3-204ENST00000439775 RRAS2P62070 204 aaPredicted RBP11.63□□□□□ -0.55
SNRPD3-204ENST00000439775 TEPPQ6URK8 271 aa11.63□□□□□ -0.55
SNRPD3-204ENST00000439775 IGF2BP2-AS1Q96M15 143 aa11.63□□□□□ -0.55
SNRPD3-204ENST00000439775 NDUFAF3Q9BU61 184 aa11.63□□□□□ -0.55
SNRPD3-204ENST00000439775 MGAT4CQ9UBM8 478 aa11.63□□□□□ -0.55
SNRPD3-204ENST00000439775 DNAH6Q9C0G6 4158 aa11.62□□□□□ -0.55
SNRPD3-204ENST00000439775 A0A087X0K7 114 aa11.62□□□□□ -0.55
SNRPD3-204ENST00000439775 PLA2G10O15496 165 aa11.62□□□□□ -0.55
SNRPD3-204ENST00000439775 DUSP14O95147 198 aaKnown RBP11.62□□□□□ -0.55
SNRPD3-204ENST00000439775 CNN1P51911 297 aaKnown RBP11.62□□□□□ -0.55
SNRPD3-204ENST00000439775 PXDC1Q5TGL8 231 aa11.62□□□□□ -0.55
SNRPD3-204ENST00000439775 FAM222AQ5U5X8 452 aa11.62□□□□□ -0.55
SNRPD3-204ENST00000439775 UHRF2Q96PU4 802 aa11.62□□□□□ -0.55
SNRPD3-204ENST00000439775 GGACTQ9BVM4 153 aa11.62□□□□□ -0.55
SNRPD3-204ENST00000439775 NDUFA13Q9P0J0 144 aa11.62□□□□□ -0.55
SNRPD3-204ENST00000439775 RNF24Q9Y225 148 aa11.62□□□□□ -0.55
SNRPD3-204ENST00000439775 DNAH10Q8IVF4 4471 aa11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 C7orf66A4D0T2 115 aa11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 LYRM1O43325 122 aa11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 MBPP02686 304 aaPredicted RBP11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 OR5G3P0C626 314 aa11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 P0DMU3 169 aa11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 FAM231AP0DMU4 169 aa11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 FAM231CP0DMU5 169 aa11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 OXA1LQ15070 435 aa11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 RRN3P1Q2M238 152 aa11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 ZNF546Q86UE3 836 aa11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 RNF182Q8N6D2 247 aa11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 OR11H7Q8NGC8 314 aa11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 FAM210BQ96KR6 192 aa11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 NIPSNAP3BQ9BS92 247 aa11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 GSKIPQ9P0R6 139 aa11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 HECTD4Q9Y4D8 3996 aa11.61□□□□□ -0.55
SNRPD3-204ENST00000439775 LOC102723971A0A1B0GUV8 181 aa11.6□□□□□ -0.55
SNRPD3-204ENST00000439775 FGL1Q08830 312 aa11.6□□□□□ -0.55
SNRPD3-204ENST00000439775 SLC38A11Q08AI6 406 aa11.6□□□□□ -0.55
SNRPD3-204ENST00000439775 IGFL4Q6B9Z1 124 aa11.6□□□□□ -0.55
SNRPD3-204ENST00000439775 ZNF738Q8NE65 137 aa11.6□□□□□ -0.55
SNRPD3-204ENST00000439775 ARL6Q9H0F7 186 aa11.6□□□□□ -0.55
SNRPD3-204ENST00000439775 ARV1Q9H2C2 271 aa11.6□□□□□ -0.55
SNRPD3-204ENST00000439775 YTHDF2Q9Y5A9 579 aaKnown RBP11.6□□□□□ -0.55
SNRPD3-204ENST00000439775 CRXO43186 299 aaPredicted RBP11.59□□□□□ -0.55
SNRPD3-204ENST00000439775 INSP01308 110 aa11.59□□□□□ -0.55
SNRPD3-204ENST00000439775 TCRBP04435 133 aa11.59□□□□□ -0.55
SNRPD3-204ENST00000439775 CXCL2P19875 107 aa11.59□□□□□ -0.55
SNRPD3-204ENST00000439775 CXCL3P19876 107 aa11.59□□□□□ -0.55
SNRPD3-204ENST00000439775 ARL16Q0P5N6 197 aa11.59□□□□□ -0.55
SNRPD3-204ENST00000439775 ZNF846Q147U1 533 aa11.59□□□□□ -0.55
SNRPD3-204ENST00000439775 PATE2Q6UY27 113 aa11.59□□□□□ -0.55
SNRPD3-204ENST00000439775 POM121L12Q8N7R1 296 aa11.59□□□□□ -0.55
SNRPD3-204ENST00000439775 TMEM208Q9BTX3 173 aa11.59□□□□□ -0.55
SNRPD3-204ENST00000439775 M0R2Z0 102 aa11.58□□□□□ -0.56
SNRPD3-204ENST00000439775 CCSO14618 274 aa11.58□□□□□ -0.56
SNRPD3-204ENST00000439775 AGPAT2O15120 278 aa11.58□□□□□ -0.56
SNRPD3-204ENST00000439775 MRPS12O15235 138 aaKnown RBP11.58□□□□□ -0.56
SNRPD3-204ENST00000439775 B2MP61769 119 aa11.58□□□□□ -0.56
SNRPD3-204ENST00000439775 SPINK13Q1W4C9 94 aa11.58□□□□□ -0.56
SNRPD3-204ENST00000439775 CCDC32Q9BV29 185 aa11.58□□□□□ -0.56
SNRPD3-204ENST00000439775 NUDT15Q9NV35 164 aa11.58□□□□□ -0.56
SNRPD3-204ENST00000439775 BOLA2-SMG1P6H3BVE0 249 aa11.57□□□□□ -0.56
SNRPD3-204ENST00000439775 L7N2F9 121 aa11.57□□□□□ -0.56
SNRPD3-204ENST00000439775 GOSR2O14653 212 aa11.57□□□□□ -0.56
SNRPD3-204ENST00000439775 VAMP2P63027 116 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms