RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 GALR1P47211 349 aa14.4□□□□□ -0.1
SEMA3B-206ENST00000439487 B2MP61769 119 aa14.4□□□□□ -0.1
SEMA3B-206ENST00000439487 Q6ZRG5 221 aa14.4□□□□□ -0.1
SEMA3B-206ENST00000439487 RSG1Q9BU20 258 aa14.4□□□□□ -0.1
SEMA3B-206ENST00000439487 ZMAT4Q9H898 229 aa14.4□□□□□ -0.1
SEMA3B-206ENST00000439487 SLC39A9Q9NUM3 307 aa14.4□□□□□ -0.1
SEMA3B-206ENST00000439487 PXMP4Q9Y6I8 212 aa14.4□□□□□ -0.1
SEMA3B-206ENST00000439487 STAB2Q8WWQ8 2551 aa14.39□□□□□ -0.11
SEMA3B-206ENST00000439487 PSMG4Q5JS54 123 aa14.39□□□□□ -0.11
SEMA3B-206ENST00000439487 C10orf113Q5VZT2 155 aa14.39□□□□□ -0.11
SEMA3B-206ENST00000439487 LINC00305Q7Z4B0 112 aa14.39□□□□□ -0.11
SEMA3B-206ENST00000439487 S100A7AQ86SG5 101 aa14.39□□□□□ -0.11
SEMA3B-206ENST00000439487 C17orf77Q96MU5 243 aa14.39□□□□□ -0.11
SEMA3B-206ENST00000439487 GPR82Q96P67 336 aa14.39□□□□□ -0.11
SEMA3B-206ENST00000439487 WDR61Q9GZS3 305 aaKnown RBP14.39□□□□□ -0.11
SEMA3B-206ENST00000439487 WFDC1Q9HC57 220 aa14.39□□□□□ -0.11
SEMA3B-206ENST00000439487 DNAJC4Q9NNZ3 241 aa14.39□□□□□ -0.11
SEMA3B-206ENST00000439487 U3KQK5 164 aa14.39□□□□□ -0.11
SEMA3B-206ENST00000439487 ELOA3CA0A087WX78 387 aaPredicted RBP14.38□□□□□ -0.11
SEMA3B-206ENST00000439487 OR1L4Q8NGR5 311 aa14.38□□□□□ -0.11
SEMA3B-206ENST00000439487 OR2T35Q8NGX2 323 aa14.38□□□□□ -0.11
SEMA3B-206ENST00000439487 SEPSECSQ9HD40 501 aaKnown RBP14.38□□□□□ -0.11
SEMA3B-206ENST00000439487 RETNQ9HD89 108 aa14.38□□□□□ -0.11
SEMA3B-206ENST00000439487 KNCNA6PVL3 124 aa14.37□□□□□ -0.11
SEMA3B-206ENST00000439487 SOCS3O14543 225 aa14.37□□□□□ -0.11
SEMA3B-206ENST00000439487 RPL7P18124 248 aaKnown RBP14.37□□□□□ -0.11
SEMA3B-206ENST00000439487 SNRPD3P62318 126 aaKnown RBP14.37□□□□□ -0.11
SEMA3B-206ENST00000439487 MORN5Q5VZ52 161 aa14.37□□□□□ -0.11
SEMA3B-206ENST00000439487 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.37□□□□□ -0.11
SEMA3B-206ENST00000439487 RCHY1Q96PM5 261 aa14.37□□□□□ -0.11
SEMA3B-206ENST00000439487 SPATA25Q9BR10 227 aa14.37□□□□□ -0.11
SEMA3B-206ENST00000439487 IFNA5P01569 189 aa14.36□□□□□ -0.11
SEMA3B-206ENST00000439487 ATF4P18848 351 aaPredicted RBP14.36□□□□□ -0.11
SEMA3B-206ENST00000439487 ID1P41134 155 aa14.36□□□□□ -0.11
SEMA3B-206ENST00000439487 ZNF709Q8N972 641 aa14.36□□□□□ -0.11
SEMA3B-206ENST00000439487 LINC00052Q96N35 136 aa14.36□□□□□ -0.11
SEMA3B-206ENST00000439487 PFDN5Q99471 154 aa14.36□□□□□ -0.11
SEMA3B-206ENST00000439487 FXYD6-FXYD2A0A087WZ82 144 aa14.35□□□□□ -0.11
SEMA3B-206ENST00000439487 G3V3Q6 166 aa14.35□□□□□ -0.11
SEMA3B-206ENST00000439487 APOC4P55056 127 aa14.35□□□□□ -0.11
SEMA3B-206ENST00000439487 GCSAMLQ5JQS6 135 aa14.35□□□□□ -0.11
SEMA3B-206ENST00000439487 SCGB1C1Q8TD33 95 aa14.35□□□□□ -0.11
SEMA3B-206ENST00000439487 C16orf92Q96LL3 132 aa14.35□□□□□ -0.11
SEMA3B-206ENST00000439487 AQP10Q96PS8 301 aa14.35□□□□□ -0.11
SEMA3B-206ENST00000439487 RNF24Q9Y225 148 aa14.35□□□□□ -0.11
SEMA3B-206ENST00000439487 TRAV5A0A0B4J249 113 aa14.34□□□□□ -0.11
SEMA3B-206ENST00000439487 C17orf112F2Z3M2 114 aa14.34□□□□□ -0.11
SEMA3B-206ENST00000439487 MRPS12O15235 138 aaKnown RBP14.34□□□□□ -0.11
SEMA3B-206ENST00000439487 PSMB3P49720 205 aa14.34□□□□□ -0.11
SEMA3B-206ENST00000439487 MEOX2P50222 304 aa14.34□□□□□ -0.11
SEMA3B-206ENST00000439487 DEFB1P60022 68 aa14.34□□□□□ -0.11
SEMA3B-206ENST00000439487 ACTL10Q5JWF8 245 aa14.34□□□□□ -0.11
SEMA3B-206ENST00000439487 STHQ8IWL8 128 aa14.34□□□□□ -0.11
SEMA3B-206ENST00000439487 KIR2DL5BA0A0G2JN68 375 aa14.33□□□□□ -0.12
SEMA3B-206ENST00000439487 KIR2DL5BA0A0G2JPC4 375 aa14.33□□□□□ -0.12
SEMA3B-206ENST00000439487 SMLR1H3BR10 107 aa14.33□□□□□ -0.12
SEMA3B-206ENST00000439487 ISLRO14498 428 aa14.33□□□□□ -0.12
SEMA3B-206ENST00000439487 KIR2DL5AQ8N109 375 aa14.33□□□□□ -0.12
SEMA3B-206ENST00000439487 KIR2DL5BQ8NHK3 375 aa14.33□□□□□ -0.12
SEMA3B-206ENST00000439487 GATAD1Q8WUU5 269 aa14.33□□□□□ -0.12
SEMA3B-206ENST00000439487 C20orf173Q96LM9 149 aa14.33□□□□□ -0.12
SEMA3B-206ENST00000439487 RFNGQ9Y644 331 aa14.33□□□□□ -0.12
SEMA3B-206ENST00000439487 SNRPCP09234 159 aaKnown RBP14.32□□□□□ -0.12
SEMA3B-206ENST00000439487 SAMD13Q5VXD3 122 aa14.32□□□□□ -0.12
SEMA3B-206ENST00000439487 IGFL4Q6B9Z1 124 aa14.32□□□□□ -0.12
SEMA3B-206ENST00000439487 BPIFA4PQ86YQ2 179 aa14.32□□□□□ -0.12
SEMA3B-206ENST00000439487 INO80EQ8NBZ0 244 aaPredicted RBP14.32□□□□□ -0.12
SEMA3B-206ENST00000439487 PARD6GQ9BYG4 376 aaPredicted RBP14.32□□□□□ -0.12
SEMA3B-206ENST00000439487 CSTL1Q9H114 145 aa14.32□□□□□ -0.12
SEMA3B-206ENST00000439487 KCNIP2Q9NS61 270 aa14.32□□□□□ -0.12
SEMA3B-206ENST00000439487 TNFSF18Q9UNG2 199 aa14.32□□□□□ -0.12
SEMA3B-206ENST00000439487 A0A087X0K7 114 aa14.31□□□□□ -0.12
SEMA3B-206ENST00000439487 TRAV8-2A0A0B4J237 113 aa14.31□□□□□ -0.12
SEMA3B-206ENST00000439487 RNF222A6NCQ9 220 aa14.31□□□□□ -0.12
SEMA3B-206ENST00000439487 UBE2CO00762 179 aa14.31□□□□□ -0.12
SEMA3B-206ENST00000439487 TRPT1Q86TN4 253 aaKnown RBP14.31□□□□□ -0.12
SEMA3B-206ENST00000439487 DEFB135Q30KP9 77 aa14.3□□□□□ -0.12
SEMA3B-206ENST00000439487 FFAR4Q5NUL3 377 aa14.3□□□□□ -0.12
SEMA3B-206ENST00000439487 GDF5OSQ5U4N7 250 aa14.3□□□□□ -0.12
SEMA3B-206ENST00000439487 FAM78BQ5VT40 261 aa14.3□□□□□ -0.12
SEMA3B-206ENST00000439487 SPATA31B1PQ5VZV4 182 aa14.3□□□□□ -0.12
SEMA3B-206ENST00000439487 Q6ZNX1 250 aa14.3□□□□□ -0.12
SEMA3B-206ENST00000439487 OVOL2Q9BRP0 275 aa14.3□□□□□ -0.12
SEMA3B-206ENST00000439487 H3BTX0 84 aa14.29□□□□□ -0.12
SEMA3B-206ENST00000439487 HLA-DMBP28068 263 aa14.29□□□□□ -0.12
SEMA3B-206ENST00000439487 MIR17HGQ75NE6 70 aa14.29□□□□□ -0.12
SEMA3B-206ENST00000439487 RNF182Q8N6D2 247 aa14.29□□□□□ -0.12
SEMA3B-206ENST00000439487 LRRC20Q8TCA0 184 aa14.29□□□□□ -0.12
SEMA3B-206ENST00000439487 SAV1Q9H4B6 383 aaPredicted RBP14.29□□□□□ -0.12
SEMA3B-206ENST00000439487 F6UB75 175 aa14.28□□□□□ -0.12
SEMA3B-206ENST00000439487 H3BMM0 161 aa14.28□□□□□ -0.12
SEMA3B-206ENST00000439487 HLA-DRB4P13762 266 aa14.28□□□□□ -0.12
SEMA3B-206ENST00000439487 ZNF266Q14584 549 aa14.28□□□□□ -0.12
SEMA3B-206ENST00000439487 Q6ZWC4 215 aa14.28□□□□□ -0.12
SEMA3B-206ENST00000439487 RPRMQ9NS64 109 aa14.28□□□□□ -0.12
SEMA3B-206ENST00000439487 HLA-DRB4X5D2U9 266 aa14.28□□□□□ -0.12
SEMA3B-206ENST00000439487 H3BQ15 152 aa14.27□□□□□ -0.13
SEMA3B-206ENST00000439487 ARPC5O15511 151 aa14.27□□□□□ -0.13
SEMA3B-206ENST00000439487 CA1P00915 261 aaPredicted RBP14.27□□□□□ -0.13
SEMA3B-206ENST00000439487 IGLC2P0DOY2 106 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms