RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 C17orf100A8MU93 164 aa8.01□□□□□ -1.13
CDC42SE1-202ENST00000439374 HLA-DRB1P01911 266 aa8.01□□□□□ -1.13
CDC42SE1-202ENST00000439374 USP9YO00507 2555 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE1-202ENST00000439374 ITGB1BP1O14713 200 aa8.01□□□□□ -1.13
CDC42SE1-202ENST00000439374 CFHR2P36980 270 aa8.01□□□□□ -1.13
CDC42SE1-202ENST00000439374 HBBP68871 147 aa8.01□□□□□ -1.13
CDC42SE1-202ENST00000439374 ADIPOQQ15848 244 aa8.01□□□□□ -1.13
CDC42SE1-202ENST00000439374 AARDQ4LEZ3 155 aa8.01□□□□□ -1.13
CDC42SE1-202ENST00000439374 SLC25A33Q9BSK2 321 aa8.01□□□□□ -1.13
CDC42SE1-202ENST00000439374 RPUSD1Q9UJJ7 312 aaKnown RBP8.01□□□□□ -1.13
CDC42SE1-202ENST00000439374 CGB1A6NKQ9 187 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 OR2J3O76001 311 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 IGHV3-23P01764 117 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 CNTFRP26992 372 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 LOXL1Q08397 574 aaPredicted RBP8□□□□□ -1.13
CDC42SE1-202ENST00000439374 RITA1Q96K30 269 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 PIEZO1Q92508 2521 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 TRAV30A0A087WSZ9 112 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 C2orf70A6NJV1 201 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 TMEM238C9JI98 176 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 M0R3E3 92 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 IGLV2-8P01709 118 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 ANKRD39Q53RE8 183 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 RUSC1-AS1Q66K80 236 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 OR1L8Q8NGR8 309 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 OR4A5Q8NH83 315 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 FAM57AQ8TBR7 257 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 KLK15Q9H2R5 256 aa8□□□□□ -1.13
CDC42SE1-202ENST00000439374 UPK2O00526 184 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 ARMS2P0C7Q2 107 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 Q6ZS92 163 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 SCNM1Q9BWG6 230 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 INSIG2Q9Y5U4 225 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 TLN2Q9Y4G6 2542 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 SONP18583 2426 aaKnown RBP7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 GRNP28799 593 aaKnown RBP7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 C12orf54Q6X4T0 127 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 PCP2Q8IVA1 136 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 RAB1CQ92928 201 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 MRPS16Q9Y3D3 137 aaKnown RBP7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 SPCS1Q9Y6A9 102 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 TRBV9A0A0B4J1U6 114 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 C9JCJ5 164 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 EVI2AP22794 236 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 KIR2DS2P43631 304 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 AMTNQ6UX39 209 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 PNKDQ8N490 385 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 ADTRPQ96IZ2 230 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 FBXL15Q9H469 300 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 AP5S1Q9NUS5 200 aa7.99□□□□□ -1.13
CDC42SE1-202ENST00000439374 NBEAP1P0C6P0 100 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 P0C879 139 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 IFI27P40305 119 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 ZNF788Q6ZQV5 615 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 GTF2H5Q6ZYL4 71 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 VSTM2AQ8TAG5 236 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 C17orf77Q96MU5 243 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 NACAE9PAV3 2078 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 A8MWL6 223 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 F2RL2O00254 374 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 SPRY2O43597 315 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 PRSS1P07477 247 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 KLF17Q5JT82 389 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 GTSF1Q8WW33 167 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 RPEQ96AT9 228 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 SLC25A2Q9BXI2 301 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 C1RLQ9NZP8 487 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 POLQO75417 2590 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 NCBP2LA6PVI3 153 aaKnown RBP7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 VMA21Q3ZAQ7 101 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 FER1L6-AS1Q8NA97 138 aa7.98□□□□□ -1.13
CDC42SE1-202ENST00000439374 HIVEP3Q5T1R4 2406 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 PTPN13Q12923 2485 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 TMEM213A2RRL7 107 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 KIR3DS1Q14943 382 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 TMEM97Q5BJF2 176 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 FAM169BQ8N8A8 192 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 OR10AG1Q8NH19 301 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 GRAMD2BQ96HH9 432 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 SRSF8Q9BRL6 282 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 PEF1Q9UBV8 284 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 RABAC1Q9UI14 185 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 AGRNO00468 2067 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 IGHV3-49A0A0A0MS15 119 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 SMIM27A0A1W2PRY6 76 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 PRR20EP86478 221 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 PRR20CP86479 221 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 PRR20DP86480 221 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 PRR20BP86481 221 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 PRR20AP86496 221 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 EIF4EBP1Q13541 118 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 URB1-AS1Q96HZ7 61 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 JMJD8Q96S16 334 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 CSTL1Q9H114 145 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 RPP21Q9H633 154 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 NGBQ9NPG2 151 aa7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 NHP2Q9NX24 153 aaKnown RBP7.97□□□□□ -1.13
CDC42SE1-202ENST00000439374 H0YJW9 148 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms