RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 BRWD1-AS2P59051 145 aa12.8□□□□□ -0.36
DHFR-201ENST00000439211 ERHP84090 104 aaKnown RBP12.8□□□□□ -0.36
DHFR-201ENST00000439211 LINC01545Q5VT33 79 aa12.8□□□□□ -0.36
DHFR-201ENST00000439211 IGKV1D-17A0A075B6S4 117 aa12.8□□□□□ -0.36
DHFR-201ENST00000439211 IGHV1-18A0A0C4DH31 117 aa12.8□□□□□ -0.36
DHFR-201ENST00000439211 PEX7O00628 323 aa12.8□□□□□ -0.36
DHFR-201ENST00000439211 KIR2DS2P43631 304 aa12.8□□□□□ -0.36
DHFR-201ENST00000439211 MOB3BQ86TA1 216 aa12.8□□□□□ -0.36
DHFR-201ENST00000439211 PAXXQ9BUH6 204 aa12.8□□□□□ -0.36
DHFR-201ENST00000439211 ZFHX2Q9C0A1 2572 aaPredicted RBP12.8□□□□□ -0.36
DHFR-201ENST00000439211 TRBV20-1A0A075B6N2 111 aa12.8□□□□□ -0.36
DHFR-201ENST00000439211 CRXO43186 299 aaPredicted RBP12.8□□□□□ -0.36
DHFR-201ENST00000439211 SAA2P0DJI9 122 aaPredicted RBP12.8□□□□□ -0.36
DHFR-201ENST00000439211 RPP21Q9H633 154 aaKnown RBP12.8□□□□□ -0.36
DHFR-201ENST00000439211 C1QTNF4Q9BXJ3 329 aa12.79□□□□□ -0.36
DHFR-201ENST00000439211 RNF7Q9UBF6 113 aa12.79□□□□□ -0.36
DHFR-201ENST00000439211 PEAR1Q5VY43 1037 aaPredicted RBP12.79□□□□□ -0.36
DHFR-201ENST00000439211 FAM216BQ8N7L0 139 aa12.79□□□□□ -0.36
DHFR-201ENST00000439211 WDR31Q8NA23 367 aa12.79□□□□□ -0.36
DHFR-201ENST00000439211 WIPF2Q8TF74 440 aaPredicted RBP12.79□□□□□ -0.36
DHFR-201ENST00000439211 HARBI1Q96MB7 349 aa12.79□□□□□ -0.36
DHFR-201ENST00000439211 PRO3102Q9H379 93 aa12.79□□□□□ -0.36
DHFR-201ENST00000439211 ZNF134P52741 427 aa12.79□□□□□ -0.36
DHFR-201ENST00000439211 GCSAMQ8N6F7 178 aa12.79□□□□□ -0.36
DHFR-201ENST00000439211 DSPP15924 2871 aaKnown RBP12.78□□□□□ -0.36
DHFR-201ENST00000439211 NCR2O95944 276 aa12.78□□□□□ -0.36
DHFR-201ENST00000439211 ZNRD1Q9P1U0 126 aa12.78□□□□□ -0.36
DHFR-201ENST00000439211 PGPA6NDG6 321 aa12.78□□□□□ -0.36
DHFR-201ENST00000439211 PRSS29PA6NIE9 313 aa12.78□□□□□ -0.36
DHFR-201ENST00000439211 CDX4O14627 284 aaPredicted RBP12.78□□□□□ -0.36
DHFR-201ENST00000439211 SCGB1C2P0DMR2 95 aa12.78□□□□□ -0.36
DHFR-201ENST00000439211 PYYP10082 97 aa12.78□□□□□ -0.36
DHFR-201ENST00000439211 MLANAQ16655 118 aa12.78□□□□□ -0.36
DHFR-201ENST00000439211 RBPMS2Q6ZRY4 209 aaKnown RBP12.78□□□□□ -0.36
DHFR-201ENST00000439211 PDPNQ86YL7 162 aa12.78□□□□□ -0.36
DHFR-201ENST00000439211 CCL17Q92583 94 aa12.78□□□□□ -0.36
DHFR-201ENST00000439211 PRNDQ9UKY0 176 aa12.78□□□□□ -0.36
DHFR-201ENST00000439211 IGKV3-15P01624 115 aa12.78□□□□□ -0.36
DHFR-201ENST00000439211 ZCCHC24Q8N2G6 241 aaKnown RBP12.78□□□□□ -0.36
DHFR-201ENST00000439211 NDFIP1Q9BT67 221 aa12.78□□□□□ -0.36
DHFR-201ENST00000439211 CHAC1Q9BUX1 264 aa12.78□□□□□ -0.36
DHFR-201ENST00000439211 ZNF747Q9BV97 191 aa12.78□□□□□ -0.36
DHFR-201ENST00000439211 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
DHFR-201ENST00000439211 SNCGO76070 127 aa12.77□□□□□ -0.36
DHFR-201ENST00000439211 PSMB2P49721 201 aa12.77□□□□□ -0.36
DHFR-201ENST00000439211 TMPRSS3P57727 454 aa12.77□□□□□ -0.36
DHFR-201ENST00000439211 GAGE2BQ13066 116 aa12.77□□□□□ -0.36
DHFR-201ENST00000439211 RIGQ13278 110 aa12.77□□□□□ -0.36
DHFR-201ENST00000439211 GAGE2EQ4V326 116 aa12.77□□□□□ -0.36
DHFR-201ENST00000439211 GAGE2DQ9UEU5 116 aa12.77□□□□□ -0.36
DHFR-201ENST00000439211 FAM90A27PA6NNH2 459 aa12.77□□□□□ -0.37
DHFR-201ENST00000439211 H3BTX0 84 aa12.77□□□□□ -0.37
DHFR-201ENST00000439211 ORM2P19652 201 aa12.77□□□□□ -0.37
DHFR-201ENST00000439211 PRR7Q8TB68 274 aa12.77□□□□□ -0.37
DHFR-201ENST00000439211 PRELID3AQ96N28 172 aa12.77□□□□□ -0.37
DHFR-201ENST00000439211 SRRM5B3KS81 715 aa12.77□□□□□ -0.37
DHFR-201ENST00000439211 TGFAP01135 160 aa12.77□□□□□ -0.37
DHFR-201ENST00000439211 TTTY13Q9BZ97 58 aa12.77□□□□□ -0.37
DHFR-201ENST00000439211 SPRY4Q9C004 299 aa12.77□□□□□ -0.37
DHFR-201ENST00000439211 SLC25A10Q9UBX3 287 aaPredicted RBP12.77□□□□□ -0.37
DHFR-201ENST00000439211 ERG28Q9UKR5 140 aa12.77□□□□□ -0.37
DHFR-201ENST00000439211 HCFC1P51610 2035 aa12.76□□□□□ -0.37
DHFR-201ENST00000439211 IGHV3-21A0A0B4J1V1 117 aa12.76□□□□□ -0.37
DHFR-201ENST00000439211 TMEM189A5PLL7 270 aa12.76□□□□□ -0.37
DHFR-201ENST00000439211 FOXI2Q6ZQN5 318 aa12.76□□□□□ -0.37
DHFR-201ENST00000439211 C1orf122Q6ZSJ8 110 aa12.76□□□□□ -0.37
DHFR-201ENST00000439211 TTC9CQ8N5M4 171 aa12.76□□□□□ -0.37
DHFR-201ENST00000439211 C15orf61A6NNL5 157 aa12.76□□□□□ -0.37
DHFR-201ENST00000439211 DUX4L9Q6RFH8 374 aaPredicted RBP12.76□□□□□ -0.37
DHFR-201ENST00000439211 GAGE12JA6NER3 117 aa12.76□□□□□ -0.37
DHFR-201ENST00000439211 PLXNB1O43157 2135 aa12.76□□□□□ -0.37
DHFR-201ENST00000439211 GAGE7O76087 117 aa12.76□□□□□ -0.37
DHFR-201ENST00000439211 GAGE12FP0CL80 117 aa12.76□□□□□ -0.37
DHFR-201ENST00000439211 GAGE12GP0CL81 117 aa12.76□□□□□ -0.37
DHFR-201ENST00000439211 GAGE12IP0CL82 117 aa12.76□□□□□ -0.37
DHFR-201ENST00000439211 GAGE4Q13068 117 aa12.76□□□□□ -0.37
DHFR-201ENST00000439211 OR9G1Q8NH87 305 aa12.76□□□□□ -0.37
DHFR-201ENST00000439211 OSR1Q8TAX0 266 aaPredicted RBP12.76□□□□□ -0.37
DHFR-201ENST00000439211 GLMPQ8WWB7 406 aa12.76□□□□□ -0.37
DHFR-201ENST00000439211 TANC2Q9HCD6 1990 aa12.75□□□□□ -0.37
DHFR-201ENST00000439211 C15orf65H3BRN8 121 aa12.75□□□□□ -0.37
DHFR-201ENST00000439211 CFHR2P36980 270 aa12.75□□□□□ -0.37
DHFR-201ENST00000439211 IFI27L2Q9H2X8 130 aa12.75□□□□□ -0.37
DHFR-201ENST00000439211 ZGRF1Q86YA3 2104 aa12.75□□□□□ -0.37
DHFR-201ENST00000439211 hADV38S2A0JD32 116 aa12.75□□□□□ -0.37
DHFR-201ENST00000439211 YAE1D1Q9NRH1 226 aa12.75□□□□□ -0.37
DHFR-201ENST00000439211 IL4P05112 153 aa12.75□□□□□ -0.37
DHFR-201ENST00000439211 RPL32P62910 135 aaKnown RBP12.75□□□□□ -0.37
DHFR-201ENST00000439211 IFI27L1Q96BM0 104 aa12.75□□□□□ -0.37
DHFR-201ENST00000439211 URB1-AS1Q96HZ7 61 aa12.75□□□□□ -0.37
DHFR-201ENST00000439211 KMT2EQ8IZD2 1858 aa12.75□□□□□ -0.37
DHFR-201ENST00000439211 IGHV3-72A0A0B4J1Y9 119 aa12.74□□□□□ -0.37
DHFR-201ENST00000439211 PROP1O75360 226 aa12.74□□□□□ -0.37
DHFR-201ENST00000439211 GPR82Q96P67 336 aa12.74□□□□□ -0.37
DHFR-201ENST00000439211 DYNLRB1Q9NP97 96 aa12.74□□□□□ -0.37
DHFR-201ENST00000439211 SPRNQ5BIV9 151 aa12.74□□□□□ -0.37
DHFR-201ENST00000439211 SRSF12Q8WXF0 261 aaKnown RBP12.74□□□□□ -0.37
DHFR-201ENST00000439211 NPIPB5A8MRT5 1133 aa12.74□□□□□ -0.37
DHFR-201ENST00000439211 FAM27E3Q08E93 113 aa12.74□□□□□ -0.37
DHFR-201ENST00000439211 FAM120AOSQ5T036 256 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms