RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 SLC25A32Q9H2D1 315 aa12.09□□□□□ -0.47
CTSD-205ENST00000438213 DNAJC4Q9NNZ3 241 aa12.09□□□□□ -0.47
CTSD-205ENST00000438213 RPL12P30050 165 aaKnown RBP12.08□□□□□ -0.48
CTSD-205ENST00000438213 C10orf113Q5VZT2 155 aa12.08□□□□□ -0.48
CTSD-205ENST00000438213 MIC13Q5XKP0 118 aa12.08□□□□□ -0.48
CTSD-205ENST00000438213 OR11H7Q8NGC8 314 aa12.08□□□□□ -0.48
CTSD-205ENST00000438213 OR1L4Q8NGR5 311 aa12.08□□□□□ -0.48
CTSD-205ENST00000438213 UHRF2Q96PU4 802 aa12.08□□□□□ -0.48
CTSD-205ENST00000438213 SCRT1Q9BWW7 348 aa12.08□□□□□ -0.48
CTSD-205ENST00000438213 MBD2Q9UBB5 411 aa12.08□□□□□ -0.48
CTSD-205ENST00000438213 STAB2Q8WWQ8 2551 aa12.08□□□□□ -0.48
CTSD-205ENST00000438213 ISLRO14498 428 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 ATF4P18848 351 aaPredicted RBP12.07□□□□□ -0.48
CTSD-205ENST00000438213 PSMB3P49720 205 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 PRR20EP86478 221 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 PRR20CP86479 221 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 PRR20DP86480 221 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 PRR20BP86481 221 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 PRR20AP86496 221 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 FGL1Q08830 312 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 CLINT1Q14677 625 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 LINC00305Q7Z4B0 112 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 ZNF709Q8N972 641 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 C16orf92Q96LL3 132 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 LINC00052Q96N35 136 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 PFDN5Q99471 154 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 RETNQ9HD89 108 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 SLC39A9Q9NUM3 307 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 TP53TG1Q9Y2A0 90 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 HSPB11Q9Y547 144 aa12.07□□□□□ -0.48
CTSD-205ENST00000438213 KNCNA6PVL3 124 aa12.06□□□□□ -0.48
CTSD-205ENST00000438213 SPRY2O43597 315 aa12.06□□□□□ -0.48
CTSD-205ENST00000438213 LYL1P12980 280 aa12.06□□□□□ -0.48
CTSD-205ENST00000438213 B2MP61769 119 aa12.06□□□□□ -0.48
CTSD-205ENST00000438213 OPCMLQ14982 345 aa12.06□□□□□ -0.48
CTSD-205ENST00000438213 ACTL10Q5JWF8 245 aa12.06□□□□□ -0.48
CTSD-205ENST00000438213 TMEM37Q8WXS4 190 aa12.06□□□□□ -0.48
CTSD-205ENST00000438213 IFNA5P01569 189 aa12.05□□□□□ -0.48
CTSD-205ENST00000438213 GIPP09681 153 aaPredicted RBP12.05□□□□□ -0.48
CTSD-205ENST00000438213 MORN3Q6PF18 240 aaPredicted RBP12.05□□□□□ -0.48
CTSD-205ENST00000438213 BPIFA4PQ86YQ2 179 aa12.05□□□□□ -0.48
CTSD-205ENST00000438213 LRRC20Q8TCA0 184 aa12.05□□□□□ -0.48
CTSD-205ENST00000438213 ATP5SQ99766 215 aa12.05□□□□□ -0.48
CTSD-205ENST00000438213 OVOL2Q9BRP0 275 aa12.05□□□□□ -0.48
CTSD-205ENST00000438213 NPCDR1Q9BY65 106 aa12.05□□□□□ -0.48
CTSD-205ENST00000438213 KCNIP2Q9NS61 270 aa12.05□□□□□ -0.48
CTSD-205ENST00000438213 PXMP4Q9Y6I8 212 aa12.05□□□□□ -0.48
CTSD-205ENST00000438213 C17orf112F2Z3M2 114 aa12.04□□□□□ -0.48
CTSD-205ENST00000438213 SOCS3O14543 225 aa12.04□□□□□ -0.48
CTSD-205ENST00000438213 SPP1P10451 314 aa12.04□□□□□ -0.48
CTSD-205ENST00000438213 NUTF2P61970 127 aaKnown RBP12.04□□□□□ -0.48
CTSD-205ENST00000438213 DEFB135Q30KP9 77 aa12.04□□□□□ -0.48
CTSD-205ENST00000438213 TMEM41BQ5BJD5 291 aa12.04□□□□□ -0.48
CTSD-205ENST00000438213 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.04□□□□□ -0.48
CTSD-205ENST00000438213 TRPT1Q86TN4 253 aaKnown RBP12.04□□□□□ -0.48
CTSD-205ENST00000438213 SCGB1C1Q8TD33 95 aa12.04□□□□□ -0.48
CTSD-205ENST00000438213 GATAD1Q8WUU5 269 aa12.04□□□□□ -0.48
CTSD-205ENST00000438213 RNF183Q96D59 192 aa12.04□□□□□ -0.48
CTSD-205ENST00000438213 WDR61Q9GZS3 305 aaKnown RBP12.04□□□□□ -0.48
CTSD-205ENST00000438213 RPRMQ9NS64 109 aa12.04□□□□□ -0.48
CTSD-205ENST00000438213 TENM3Q9P273 2699 aa12.04□□□□□ -0.48
CTSD-205ENST00000438213 CA1P00915 261 aaPredicted RBP12.03□□□□□ -0.48
CTSD-205ENST00000438213 SPATA31B1PQ5VZV4 182 aa12.03□□□□□ -0.48
CTSD-205ENST00000438213 A0A087X0K7 114 aa12.02□□□□□ -0.49
CTSD-205ENST00000438213 H3BMM0 161 aa12.02□□□□□ -0.49
CTSD-205ENST00000438213 EBLN2Q6P2I7 272 aa12.02□□□□□ -0.49
CTSD-205ENST00000438213 FOXI2Q6ZQN5 318 aa12.02□□□□□ -0.49
CTSD-205ENST00000438213 SMIM3Q9BZL3 60 aa12.02□□□□□ -0.49
CTSD-205ENST00000438213 AGRNO00468 2067 aa12.01□□□□□ -0.49
CTSD-205ENST00000438213 HLA-DRB4P13762 266 aa12.01□□□□□ -0.49
CTSD-205ENST00000438213 C17orf77Q96MU5 243 aa12.01□□□□□ -0.49
CTSD-205ENST00000438213 SAV1Q9H4B6 383 aaPredicted RBP12.01□□□□□ -0.49
CTSD-205ENST00000438213 EDA2RQ9HAV5 297 aa12.01□□□□□ -0.49
CTSD-205ENST00000438213 HLA-DRB4X5D2U9 266 aa12.01□□□□□ -0.49
CTSD-205ENST00000438213 CXCL2P19875 107 aa12□□□□□ -0.49
CTSD-205ENST00000438213 LCN15Q6UWW0 184 aa12□□□□□ -0.49
CTSD-205ENST00000438213 INO80EQ8NBZ0 244 aaPredicted RBP12□□□□□ -0.49
CTSD-205ENST00000438213 C1QTNF4Q9BXJ3 329 aa12□□□□□ -0.49
CTSD-205ENST00000438213 PARD6GQ9BYG4 376 aaPredicted RBP12□□□□□ -0.49
CTSD-205ENST00000438213 C3orf84H3BNL1 204 aa11.99□□□□□ -0.49
CTSD-205ENST00000438213 MRPS12O15235 138 aaKnown RBP11.99□□□□□ -0.49
CTSD-205ENST00000438213 GUK1Q16774 197 aa11.99□□□□□ -0.49
CTSD-205ENST00000438213 MORN5Q5VZ52 161 aa11.99□□□□□ -0.49
CTSD-205ENST00000438213 OR2T35Q8NGX2 323 aa11.99□□□□□ -0.49
CTSD-205ENST00000438213 IL17DQ8TAD2 202 aa11.99□□□□□ -0.49
CTSD-205ENST00000438213 MUC7Q8TAX7 377 aa11.99□□□□□ -0.49
CTSD-205ENST00000438213 CLUHP3Q96NS8 147 aa11.99□□□□□ -0.49
CTSD-205ENST00000438213 AQP10Q96PS8 301 aa11.99□□□□□ -0.49
CTSD-205ENST00000438213 RARRES2Q99969 163 aa11.99□□□□□ -0.49
CTSD-205ENST00000438213 HRH4Q9H3N8 390 aa11.99□□□□□ -0.49
CTSD-205ENST00000438213 TRAV8-2A0A0B4J237 113 aa11.98□□□□□ -0.49
CTSD-205ENST00000438213 TRAV5A0A0B4J249 113 aa11.98□□□□□ -0.49
CTSD-205ENST00000438213 Q5BKY6 102 aa11.98□□□□□ -0.49
CTSD-205ENST00000438213 FAM78BQ5VT40 261 aa11.98□□□□□ -0.49
CTSD-205ENST00000438213 OR4B1Q8NGF8 309 aa11.98□□□□□ -0.49
CTSD-205ENST00000438213 OR11H2Q8NH07 326 aa11.98□□□□□ -0.49
CTSD-205ENST00000438213 C20orf173Q96LM9 149 aa11.98□□□□□ -0.49
CTSD-205ENST00000438213 SLC50A1Q9BRV3 221 aa11.98□□□□□ -0.49
CTSD-205ENST00000438213 WFDC1Q9HC57 220 aa11.98□□□□□ -0.49
CTSD-205ENST00000438213 CLEC5AQ9NY25 188 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms