RNA–Protein interactions for RNA: ENST00000437002.5

MMS19-208, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, human

APPRIS ALT2 TSL 5

Gene MMS19, Length 933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMS19-208	ENST00000437002	DEFB130B	P0DP73	79 aa		12.53	□□□□□ -0.4
MMS19-208	ENST00000437002	DEFB130A	P0DP74	79 aa		12.53	□□□□□ -0.4
MMS19-208	ENST00000437002	PRB4	P10163	310 aa	Predicted RBP	12.53	□□□□□ -0.4
MMS19-208	ENST00000437002	ORM2	P19652	201 aa		12.53	□□□□□ -0.4
MMS19-208	ENST00000437002	RAB11A	P62491	216 aa		12.53	□□□□□ -0.4
MMS19-208	ENST00000437002	SAMD13	Q5VXD3	122 aa		12.53	□□□□□ -0.4
MMS19-208	ENST00000437002	SCGB3A2	Q96PL1	93 aa		12.53	□□□□□ -0.4
MMS19-208	ENST00000437002	CCDC59	Q9P031	241 aa	Known RBP	12.53	□□□□□ -0.4
MMS19-208	ENST00000437002	SLC45A2	Q9UMX9	530 aa		12.53	□□□□□ -0.4
MMS19-208	ENST00000437002	NBDY	A0A0U1RRE5	68 aa		12.52	□□□□□ -0.41
MMS19-208	ENST00000437002	LYRM9	A8MSI8	78 aa		12.52	□□□□□ -0.41
MMS19-208	ENST00000437002	NOL3	O60936	208 aa	Known RBP	12.52	□□□□□ -0.41
MMS19-208	ENST00000437002	ANXA3	P12429	323 aa		12.52	□□□□□ -0.41
MMS19-208	ENST00000437002	FAM3B	P58499	235 aa	Predicted RBP	12.52	□□□□□ -0.41
MMS19-208	ENST00000437002	TMED4	Q7Z7H5	227 aa		12.52	□□□□□ -0.41
MMS19-208	ENST00000437002	LRTM2	Q8N967	370 aa		12.52	□□□□□ -0.41
MMS19-208	ENST00000437002	OR4D5	Q8NGN0	318 aa		12.52	□□□□□ -0.41
MMS19-208	ENST00000437002	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	12.52	□□□□□ -0.41
MMS19-208	ENST00000437002	TMED3	Q9Y3Q3	217 aa		12.52	□□□□□ -0.41
MMS19-208	ENST00000437002	DUXB	A0A1W2PPF3	345 aa		12.51	□□□□□ -0.41
MMS19-208	ENST00000437002	CCDC160	A6NGH7	325 aa		12.51	□□□□□ -0.41
MMS19-208	ENST00000437002	C16orf90	A8MZG2	172 aa		12.51	□□□□□ -0.41
MMS19-208	ENST00000437002	WRB	O00258	174 aa		12.51	□□□□□ -0.41
MMS19-208	ENST00000437002	INS	P01308	110 aa		12.51	□□□□□ -0.41
MMS19-208	ENST00000437002	SLC25A6	P12236	298 aa		12.51	□□□□□ -0.41
MMS19-208	ENST00000437002	TSPO	P30536	169 aa		12.51	□□□□□ -0.41
MMS19-208	ENST00000437002	TNFSF8	P32971	234 aa		12.51	□□□□□ -0.41
MMS19-208	ENST00000437002	GGNBP1	Q5YKI7	109 aa		12.51	□□□□□ -0.41
MMS19-208	ENST00000437002	OR1B1	Q8NGR6	318 aa		12.51	□□□□□ -0.41
MMS19-208	ENST00000437002	TRIM63	Q969Q1	353 aa		12.51	□□□□□ -0.41
MMS19-208	ENST00000437002	SLIRP	Q9GZT3	109 aa	Known RBP	12.51	□□□□□ -0.41
MMS19-208	ENST00000437002	RABL2A	Q9UBK7	228 aa	Predicted RBP	12.51	□□□□□ -0.41
MMS19-208	ENST00000437002	RABL2B	Q9UNT1	228 aa		12.51	□□□□□ -0.41
MMS19-208	ENST00000437002		F5H768	121 aa		12.5	□□□□□ -0.41
MMS19-208	ENST00000437002		H3BP45	60 aa		12.5	□□□□□ -0.41
MMS19-208	ENST00000437002		H3BRN7	92 aa		12.5	□□□□□ -0.41
MMS19-208	ENST00000437002	CFD	P00746	253 aa	Predicted RBP	12.5	□□□□□ -0.41
MMS19-208	ENST00000437002	ACOT7L	Q6ZUV0	252 aa		12.5	□□□□□ -0.41
MMS19-208	ENST00000437002	ATG101	Q9BSB4	218 aa		12.5	□□□□□ -0.41
MMS19-208	ENST00000437002	LINC00588	Q9Y4M8	146 aa		12.5	□□□□□ -0.41
MMS19-208	ENST00000437002		H3BMQ9	156 aa		12.49	□□□□□ -0.41
MMS19-208	ENST00000437002	SYNGR2	O43760	224 aa		12.49	□□□□□ -0.41
MMS19-208	ENST00000437002	CDK2AP2	O75956	126 aa		12.49	□□□□□ -0.41
MMS19-208	ENST00000437002	DUSP14	O95147	198 aa	Known RBP	12.49	□□□□□ -0.41
MMS19-208	ENST00000437002	NUDT3	O95989	172 aa		12.49	□□□□□ -0.41
MMS19-208	ENST00000437002	TMEM128	Q5BJH2	165 aa		12.49	□□□□□ -0.41
MMS19-208	ENST00000437002	C6orf223	Q8N319	242 aa		12.49	□□□□□ -0.41
MMS19-208	ENST00000437002	BPIFC	Q8NFQ6	507 aa		12.49	□□□□□ -0.41
MMS19-208	ENST00000437002	TMEM147	Q9BVK8	224 aa		12.49	□□□□□ -0.41
MMS19-208	ENST00000437002	HERC1	Q15751	4861 aa		12.48	□□□□□ -0.41
MMS19-208	ENST00000437002	BOLA2-SMG1P6	H3BVE0	249 aa		12.48	□□□□□ -0.41
MMS19-208	ENST00000437002	VAMP1	P23763	118 aa		12.48	□□□□□ -0.41
MMS19-208	ENST00000437002	FGL1	Q08830	312 aa		12.48	□□□□□ -0.41
MMS19-208	ENST00000437002	PPP1R1A	Q13522	171 aa		12.48	□□□□□ -0.41
MMS19-208	ENST00000437002	CNPY1	Q3B7I2	92 aa		12.48	□□□□□ -0.41
MMS19-208	ENST00000437002	SPANXN5	Q5MJ07	72 aa		12.48	□□□□□ -0.41
MMS19-208	ENST00000437002	ZNF738	Q8NE65	137 aa		12.48	□□□□□ -0.41
MMS19-208	ENST00000437002	RNF141	Q8WVD5	230 aa		12.48	□□□□□ -0.41
MMS19-208	ENST00000437002	SHANK2-AS3	Q9BTD1	123 aa		12.48	□□□□□ -0.41
MMS19-208	ENST00000437002	FABP12	A6NFH5	140 aa		12.47	□□□□□ -0.41
MMS19-208	ENST00000437002	MED6	O75586	246 aa		12.47	□□□□□ -0.41
MMS19-208	ENST00000437002	AKR1C1	Q04828	323 aa		12.47	□□□□□ -0.41
MMS19-208	ENST00000437002	GPR82	Q96P67	336 aa		12.47	□□□□□ -0.41
MMS19-208	ENST00000437002	UHRF2	Q96PU4	802 aa		12.47	□□□□□ -0.41
MMS19-208	ENST00000437002	CIB3	Q96Q77	187 aa	Predicted RBP	12.47	□□□□□ -0.41
MMS19-208	ENST00000437002	KRTAP1-5	Q9BYS1	174 aa		12.47	□□□□□ -0.41
MMS19-208	ENST00000437002	CBY3	A6NI87	242 aa		12.46	□□□□□ -0.41
MMS19-208	ENST00000437002	PMS2P5	A8MQ11	134 aa		12.46	□□□□□ -0.41
MMS19-208	ENST00000437002	CCNK	O75909	580 aa		12.46	□□□□□ -0.41
MMS19-208	ENST00000437002	SFT2D2	O95562	160 aa		12.46	□□□□□ -0.41
MMS19-208	ENST00000437002	HOXB5	P09067	269 aa		12.46	□□□□□ -0.41
MMS19-208	ENST00000437002	CXCL3	P19876	107 aa		12.46	□□□□□ -0.41
MMS19-208	ENST00000437002	HIST1H1A	Q02539	215 aa	Predicted RBP	12.46	□□□□□ -0.41
MMS19-208	ENST00000437002	KIR3DS1	Q14943	382 aa		12.46	□□□□□ -0.41
MMS19-208	ENST00000437002	CYP2G1P	Q6ZSU1	146 aa		12.46	□□□□□ -0.41
MMS19-208	ENST00000437002	TMEM144	Q7Z5S9	345 aa		12.46	□□□□□ -0.41
MMS19-208	ENST00000437002	MAPKAPK5-AS1	Q8N8E1	139 aa		12.46	□□□□□ -0.41
MMS19-208	ENST00000437002	OR8A1	Q8NGG7	326 aa		12.46	□□□□□ -0.41
MMS19-208	ENST00000437002	MRPS12	O15235	138 aa	Known RBP	12.45	□□□□□ -0.42
MMS19-208	ENST00000437002	ATP5G1	P05496	136 aa		12.45	□□□□□ -0.42
MMS19-208	ENST00000437002	ATP5G3	P48201	142 aa		12.45	□□□□□ -0.42
MMS19-208	ENST00000437002	B2M	P61769	119 aa		12.45	□□□□□ -0.42
MMS19-208	ENST00000437002	LINC01587	Q99440	93 aa		12.45	□□□□□ -0.42
MMS19-208	ENST00000437002	PTTG2	Q9NZH5	202 aa		12.45	□□□□□ -0.42
MMS19-208	ENST00000437002		A0A087X0K7	114 aa		12.44	□□□□□ -0.42
MMS19-208	ENST00000437002	ADAP1	O75689	374 aa		12.44	□□□□□ -0.42
MMS19-208	ENST00000437002	TAS2R60	P59551	318 aa		12.44	□□□□□ -0.42
MMS19-208	ENST00000437002	PLP1	P60201	277 aa		12.44	□□□□□ -0.42
MMS19-208	ENST00000437002	POLR2G	P62487	172 aa	Known RBP eCLIP	12.44	□□□□□ -0.42
MMS19-208	ENST00000437002	RPP30	P78346	268 aa	Known RBP	12.44	□□□□□ -0.42
MMS19-208	ENST00000437002	PATE2	Q6UY27	113 aa		12.44	□□□□□ -0.42
MMS19-208	ENST00000437002	RNASE8	Q8TDE3	154 aa	Known RBP	12.44	□□□□□ -0.42
MMS19-208	ENST00000437002	HIGD1A	Q9Y241	93 aa		12.44	□□□□□ -0.42
MMS19-208	ENST00000437002	STRAP	Q9Y3F4	350 aa	Known RBP	12.44	□□□□□ -0.42
MMS19-208	ENST00000437002		V9GYH0	126 aa		12.44	□□□□□ -0.42
MMS19-208	ENST00000437002	PIGBOS1	A0A0B4J2F0	54 aa		12.43	□□□□□ -0.42
MMS19-208	ENST00000437002	IL5	P05113	134 aa		12.43	□□□□□ -0.42
MMS19-208	ENST00000437002	LINC00869	P0C866	280 aa		12.43	□□□□□ -0.42
MMS19-208	ENST00000437002	HTN1	P15515	57 aa		12.43	□□□□□ -0.42
MMS19-208	ENST00000437002	RHOB	P62745	196 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms