RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 RPL7P18124 248 aaKnown RBP11.54□□□□□ -0.56
TREX1-201ENST00000433541 Q5BKY6 102 aa11.54□□□□□ -0.56
TREX1-201ENST00000433541 LRRC20Q8TCA0 184 aa11.54□□□□□ -0.56
TREX1-201ENST00000433541 DCANP1Q8TF63 244 aa11.54□□□□□ -0.56
TREX1-201ENST00000433541 LINC00052Q96N35 136 aa11.54□□□□□ -0.56
TREX1-201ENST00000433541 FAM110AQ9BQ89 295 aa11.54□□□□□ -0.56
TREX1-201ENST00000433541 RSG1Q9BU20 258 aa11.54□□□□□ -0.56
TREX1-201ENST00000433541 DNAJC4Q9NNZ3 241 aa11.54□□□□□ -0.56
TREX1-201ENST00000433541 RBMY1BA6NDE4 496 aaKnown RBP11.53□□□□□ -0.56
TREX1-201ENST00000433541 RBMY1EA6NEQ0 496 aaKnown RBP11.53□□□□□ -0.56
TREX1-201ENST00000433541 RBMY1DP0C7P1 496 aaKnown RBP11.53□□□□□ -0.56
TREX1-201ENST00000433541 MEOX2P50222 304 aa11.53□□□□□ -0.56
TREX1-201ENST00000433541 PRR20EP86478 221 aa11.53□□□□□ -0.56
TREX1-201ENST00000433541 PRR20CP86479 221 aa11.53□□□□□ -0.56
TREX1-201ENST00000433541 PRR20DP86480 221 aa11.53□□□□□ -0.56
TREX1-201ENST00000433541 PRR20BP86481 221 aa11.53□□□□□ -0.56
TREX1-201ENST00000433541 PRR20AP86496 221 aa11.53□□□□□ -0.56
TREX1-201ENST00000433541 HAGHQ16775 308 aa11.53□□□□□ -0.56
TREX1-201ENST00000433541 PATE2Q6UY27 113 aa11.53□□□□□ -0.56
TREX1-201ENST00000433541 STHQ8IWL8 128 aa11.53□□□□□ -0.56
TREX1-201ENST00000433541 C16orf92Q96LL3 132 aa11.53□□□□□ -0.56
TREX1-201ENST00000433541 CITED4Q96RK1 184 aa11.53□□□□□ -0.56
TREX1-201ENST00000433541 AGRNO00468 2067 aa11.52□□□□□ -0.57
TREX1-201ENST00000433541 APOC4P55056 127 aa11.52□□□□□ -0.57
TREX1-201ENST00000433541 ZNF266Q14584 549 aa11.52□□□□□ -0.57
TREX1-201ENST00000433541 SAMD13Q5VXD3 122 aa11.52□□□□□ -0.57
TREX1-201ENST00000433541 AQP10Q96PS8 301 aa11.52□□□□□ -0.57
TREX1-201ENST00000433541 hCG_2014768A0A024R1R8 64 aa11.51□□□□□ -0.57
TREX1-201ENST00000433541 SMLR1H3BR10 107 aa11.51□□□□□ -0.57
TREX1-201ENST00000433541 ACTL10Q5JWF8 245 aa11.51□□□□□ -0.57
TREX1-201ENST00000433541 BPIFA4PQ86YQ2 179 aa11.51□□□□□ -0.57
TREX1-201ENST00000433541 CHAC2Q8WUX2 184 aa11.51□□□□□ -0.57
TREX1-201ENST00000433541 TMEM37Q8WXS4 190 aa11.51□□□□□ -0.57
TREX1-201ENST00000433541 SPATA25Q9BR10 227 aa11.51□□□□□ -0.57
TREX1-201ENST00000433541 KNCNA6PVL3 124 aa11.5□□□□□ -0.57
TREX1-201ENST00000433541 ARPC5O15511 151 aa11.5□□□□□ -0.57
TREX1-201ENST00000433541 PSMB3P49720 205 aa11.5□□□□□ -0.57
TREX1-201ENST00000433541 FFAR4Q5NUL3 377 aa11.5□□□□□ -0.57
TREX1-201ENST00000433541 FAM78BQ5VT40 261 aa11.5□□□□□ -0.57
TREX1-201ENST00000433541 GATAD1Q8WUU5 269 aa11.5□□□□□ -0.57
TREX1-201ENST00000433541 WFDC1Q9HC57 220 aa11.5□□□□□ -0.57
TREX1-201ENST00000433541 U3KQK5 164 aa11.5□□□□□ -0.57
TREX1-201ENST00000433541 COL7A1Q02388 2944 aa11.5□□□□□ -0.57
TREX1-201ENST00000433541 BORCS7-ASMTA0A0B4J1R7 106 aa11.49□□□□□ -0.57
TREX1-201ENST00000433541 ISLRO14498 428 aa11.49□□□□□ -0.57
TREX1-201ENST00000433541 SNRPCP09234 159 aaKnown RBP11.49□□□□□ -0.57
TREX1-201ENST00000433541 GCSAMLQ5JQS6 135 aa11.49□□□□□ -0.57
TREX1-201ENST00000433541 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.49□□□□□ -0.57
TREX1-201ENST00000433541 HSD17B11Q8NBQ5 300 aa11.49□□□□□ -0.57
TREX1-201ENST00000433541 RCHY1Q96PM5 261 aa11.49□□□□□ -0.57
TREX1-201ENST00000433541 TNFSF18Q9UNG2 199 aa11.49□□□□□ -0.57
TREX1-201ENST00000433541 TRAV5A0A0B4J249 113 aa11.48□□□□□ -0.57
TREX1-201ENST00000433541 MORN5Q5VZ52 161 aa11.48□□□□□ -0.57
TREX1-201ENST00000433541 LINC00322Q6ZN03 302 aaPredicted RBP11.48□□□□□ -0.57
TREX1-201ENST00000433541 MFFQ9GZY8 342 aa11.48□□□□□ -0.57
TREX1-201ENST00000433541 SEPSECSQ9HD40 501 aaKnown RBP11.48□□□□□ -0.57
TREX1-201ENST00000433541 RETNQ9HD89 108 aa11.48□□□□□ -0.57
TREX1-201ENST00000433541 RPRMQ9NS64 109 aa11.48□□□□□ -0.57
TREX1-201ENST00000433541 RNF222A6NCQ9 220 aa11.47□□□□□ -0.57
TREX1-201ENST00000433541 IGFL4Q6B9Z1 124 aa11.47□□□□□ -0.57
TREX1-201ENST00000433541 EBLN2Q6P2I7 272 aa11.47□□□□□ -0.57
TREX1-201ENST00000433541 ZNF738Q8NE65 137 aa11.47□□□□□ -0.57
TREX1-201ENST00000433541 TM2D3Q9BRN9 247 aa11.47□□□□□ -0.57
TREX1-201ENST00000433541 PARD6GQ9BYG4 376 aaPredicted RBP11.47□□□□□ -0.57
TREX1-201ENST00000433541 KIR2DL5BA0A0G2JN68 375 aa11.46□□□□□ -0.57
TREX1-201ENST00000433541 KIR2DL5BA0A0G2JPC4 375 aa11.46□□□□□ -0.57
TREX1-201ENST00000433541 H3BTX0 84 aa11.46□□□□□ -0.57
TREX1-201ENST00000433541 CA1P00915 261 aaPredicted RBP11.46□□□□□ -0.57
TREX1-201ENST00000433541 IGKV3-20P01619 116 aa11.46□□□□□ -0.57
TREX1-201ENST00000433541 DEFB135Q30KP9 77 aa11.46□□□□□ -0.57
TREX1-201ENST00000433541 ACOT6Q3I5F7 207 aaPredicted RBP11.46□□□□□ -0.57
TREX1-201ENST00000433541 LCN15Q6UWW0 184 aa11.46□□□□□ -0.57
TREX1-201ENST00000433541 Q6ZNX1 250 aa11.46□□□□□ -0.57
TREX1-201ENST00000433541 KIR2DL5AQ8N109 375 aa11.46□□□□□ -0.57
TREX1-201ENST00000433541 RNF182Q8N6D2 247 aa11.46□□□□□ -0.57
TREX1-201ENST00000433541 KIR2DL5BQ8NHK3 375 aa11.46□□□□□ -0.57
TREX1-201ENST00000433541 MRPL32Q9BYC8 188 aaKnown RBP11.46□□□□□ -0.57
TREX1-201ENST00000433541 CSTL1Q9H114 145 aa11.46□□□□□ -0.57
TREX1-201ENST00000433541 A0A087X0K7 114 aa11.45□□□□□ -0.58
TREX1-201ENST00000433541 A0A1W2PPV4 95 aa11.45□□□□□ -0.58
TREX1-201ENST00000433541 UBE2CO00762 179 aa11.45□□□□□ -0.58
TREX1-201ENST00000433541 SOCS3O14543 225 aa11.45□□□□□ -0.58
TREX1-201ENST00000433541 OR7C2O60412 319 aa11.45□□□□□ -0.58
TREX1-201ENST00000433541 RHOBP62745 196 aa11.45□□□□□ -0.58
TREX1-201ENST00000433541 SPATA31B1PQ5VZV4 182 aa11.45□□□□□ -0.58
TREX1-201ENST00000433541 MIR17HGQ75NE6 70 aa11.45□□□□□ -0.58
TREX1-201ENST00000433541 OR4B1Q8NGF8 309 aa11.45□□□□□ -0.58
TREX1-201ENST00000433541 SLC50A1Q9BRV3 221 aa11.45□□□□□ -0.58
TREX1-201ENST00000433541 NBEAL2Q6ZNJ1 2754 aa11.44□□□□□ -0.58
TREX1-201ENST00000433541 G3V3Q6 166 aa11.44□□□□□ -0.58
TREX1-201ENST00000433541 DEFB1P60022 68 aa11.44□□□□□ -0.58
TREX1-201ENST00000433541 NUTF2P61970 127 aaKnown RBP11.44□□□□□ -0.58
TREX1-201ENST00000433541 RPL7L1Q6DKI1 246 aaKnown RBP11.44□□□□□ -0.58
TREX1-201ENST00000433541 FOXI2Q6ZQN5 318 aa11.44□□□□□ -0.58
TREX1-201ENST00000433541 BLNKQ8WV28 456 aa11.44□□□□□ -0.58
TREX1-201ENST00000433541 C17orf77Q96MU5 243 aa11.44□□□□□ -0.58
TREX1-201ENST00000433541 FUT9Q9Y231 359 aa11.44□□□□□ -0.58
TREX1-201ENST00000433541 TIMM9Q9Y5J7 89 aa11.44□□□□□ -0.58
TREX1-201ENST00000433541 RFNGQ9Y644 331 aa11.44□□□□□ -0.58
TREX1-201ENST00000433541 F6UB75 175 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms