RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 TMEM208Q9BTX3 173 aa6.62□□□□□ -1.35
HDAC9-211ENST00000430454 X6R8D5 127 aa6.62□□□□□ -1.35
HDAC9-211ENST00000430454 EPPK1P58107 5090 aaKnown RBP6.61□□□□□ -1.35
HDAC9-211ENST00000430454 IGKV1OR2-108A0A075B7D4 117 aa6.61□□□□□ -1.35
HDAC9-211ENST00000430454 PGPEP1LA6NFU8 196 aa6.61□□□□□ -1.35
HDAC9-211ENST00000430454 IGKV3-20P01619 116 aa6.61□□□□□ -1.35
HDAC9-211ENST00000430454 HBE1P02100 147 aa6.61□□□□□ -1.35
HDAC9-211ENST00000430454 OR5G3P0C626 314 aa6.61□□□□□ -1.35
HDAC9-211ENST00000430454 RBMY1A1P0DJD3 496 aaKnown RBP6.61□□□□□ -1.35
HDAC9-211ENST00000430454 RBMY1CP0DJD4 496 aa6.61□□□□□ -1.35
HDAC9-211ENST00000430454 RBMY1FQ15415 496 aaKnown RBP6.61□□□□□ -1.35
HDAC9-211ENST00000430454 TEPPQ6URK8 271 aa6.61□□□□□ -1.35
HDAC9-211ENST00000430454 LINC00299Q6ZSB3 139 aa6.61□□□□□ -1.35
HDAC9-211ENST00000430454 ZNF546Q86UE3 836 aa6.61□□□□□ -1.35
HDAC9-211ENST00000430454 CCDC32Q9BV29 185 aa6.61□□□□□ -1.35
HDAC9-211ENST00000430454 RNF126Q9BV68 326 aa6.61□□□□□ -1.35
HDAC9-211ENST00000430454 C20orf85Q9H1P6 137 aa6.61□□□□□ -1.35
HDAC9-211ENST00000430454 PPP1R14DQ9NXH3 145 aa6.61□□□□□ -1.35
HDAC9-211ENST00000430454 DOK5Q9P104 306 aa6.61□□□□□ -1.35
HDAC9-211ENST00000430454 FLVCR2Q9UPI3 526 aa6.61□□□□□ -1.35
HDAC9-211ENST00000430454 DEFB131BA0A096LNP1 70 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 PRSS46E5RG02 174 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 K7EPK0 472 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 SOCS3O14543 225 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 GOSR2O14653 212 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 LYRM1O43325 122 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 DEDDO75618 318 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 LINC00869P0C866 280 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 BCAP31P51572 246 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 FGL1Q08830 312 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 FAM78BQ5VT40 261 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 DMRTA1Q5VZB9 504 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 TMEM14EPQ6UXP3 125 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 ZNF705AQ6ZN79 300 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-211ENST00000430454 ZBTB8BQ8NAP8 495 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-211ENST00000430454 CLRN3Q8NCR9 226 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 S100ZQ8WXG8 99 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 FAM210AQ96ND0 272 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 SHANK2-AS3Q9BTD1 123 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 SLC25A39Q9BZJ4 359 aaPredicted RBP6.6□□□□□ -1.35
HDAC9-211ENST00000430454 SLC25A32Q9H2D1 315 aa6.6□□□□□ -1.35
HDAC9-211ENST00000430454 IGHV3OR16-12A0A075B7B8 117 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 ELOA3CA0A087WX78 387 aaPredicted RBP6.59□□□□□ -1.35
HDAC9-211ENST00000430454 A0A0J9YX75 114 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 C5orf51A6NDU8 294 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 ZNF705FA8MVS1 300 aaPredicted RBP6.59□□□□□ -1.35
HDAC9-211ENST00000430454 INSP01308 110 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 TCRBP04435 133 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 METTL15P1P0C7V9 234 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 ZNF705DP0CH99 300 aaPredicted RBP6.59□□□□□ -1.35
HDAC9-211ENST00000430454 ZNF705BP0CI00 300 aaPredicted RBP6.59□□□□□ -1.35
HDAC9-211ENST00000430454 P0DMU3 169 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 FAM231AP0DMU4 169 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 FAM231CP0DMU5 169 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 PLP1P60201 277 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 RRAS2P62070 204 aaPredicted RBP6.59□□□□□ -1.35
HDAC9-211ENST00000430454 LINC01559Q495D7 138 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 Q6ZRG5 221 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 Q6ZTC4 211 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 ZNF738Q8NE65 137 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 ZNF431Q8TF32 576 aaPredicted RBP6.59□□□□□ -1.35
HDAC9-211ENST00000430454 FAM210BQ96KR6 192 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 NDUFAF3Q9BU61 184 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 ARL6Q9H0F7 186 aa6.59□□□□□ -1.35
HDAC9-211ENST00000430454 IGHV4-4A0A075B6R2 117 aa6.58□□□□□ -1.36
HDAC9-211ENST00000430454 FAM240BA0A1B0GVZ2 78 aa6.58□□□□□ -1.36
HDAC9-211ENST00000430454 H3BRN7 92 aa6.58□□□□□ -1.36
HDAC9-211ENST00000430454 COX7A2P2O60397 106 aa6.58□□□□□ -1.36
HDAC9-211ENST00000430454 CXCL2P19875 107 aa6.58□□□□□ -1.36
HDAC9-211ENST00000430454 GATA2P23769 480 aaPredicted RBP6.58□□□□□ -1.36
HDAC9-211ENST00000430454 CAV2P51636 162 aa6.58□□□□□ -1.36
HDAC9-211ENST00000430454 EMP1P54849 157 aa6.58□□□□□ -1.36
HDAC9-211ENST00000430454 HBG1P69891 147 aa6.58□□□□□ -1.36
HDAC9-211ENST00000430454 HBG2P69892 147 aa6.58□□□□□ -1.36
HDAC9-211ENST00000430454 RRN3P1Q2M238 152 aa6.58□□□□□ -1.36
HDAC9-211ENST00000430454 GSG1LQ6UXU4 331 aa6.58□□□□□ -1.36
HDAC9-211ENST00000430454 STX12Q86Y82 276 aa6.58□□□□□ -1.36
HDAC9-211ENST00000430454 C12orf45Q8N5I9 185 aaPredicted RBP6.58□□□□□ -1.36
HDAC9-211ENST00000430454 IGF2BP2-AS1Q96M15 143 aa6.58□□□□□ -1.36
HDAC9-211ENST00000430454 SDHCQ99643 169 aaPredicted RBP6.58□□□□□ -1.36
HDAC9-211ENST00000430454 SCRT1Q9BWW7 348 aa6.58□□□□□ -1.36
HDAC9-211ENST00000430454 GPN1Q9HCN4 374 aaPredicted RBP6.58□□□□□ -1.36
HDAC9-211ENST00000430454 NUDT15Q9NV35 164 aa6.58□□□□□ -1.36
HDAC9-211ENST00000430454 APLNQ9ULZ1 77 aa6.58□□□□□ -1.36
HDAC9-211ENST00000430454 TRAV6A0A075B6T7 132 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 A0A087X0K7 114 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 MBPP02686 304 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-211ENST00000430454 H2AFB2P0C5Z0 115 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 BTCP35070 178 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 FXYD7P58549 80 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 RHOBP62745 196 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 OXA1LQ15070 435 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 C12orf74Q32Q52 190 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 GDF5OSQ5U4N7 250 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 LCN15Q6UWW0 184 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 BPIFA4PQ86YQ2 179 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 TMEM256Q8N2U0 113 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 ZNF709Q8N972 641 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 OR1L4Q8NGR5 311 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms