RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	FXYD7	P58549	80 aa		12.71	□□□□□ -0.37
MRPL28-203	ENST00000429738	OR4B1	Q8NGF8	309 aa		12.71	□□□□□ -0.37
MRPL28-203	ENST00000429738	C16orf92	Q96LL3	132 aa		12.71	□□□□□ -0.37
MRPL28-203	ENST00000429738	RSG1	Q9BU20	258 aa		12.71	□□□□□ -0.37
MRPL28-203	ENST00000429738	SLC35B3	Q9H1N7	401 aa		12.71	□□□□□ -0.37
MRPL28-203	ENST00000429738	RPRM	Q9NS64	109 aa		12.71	□□□□□ -0.37
MRPL28-203	ENST00000429738	RCL1	Q9Y2P8	373 aa	Known RBP	12.71	□□□□□ -0.37
MRPL28-203	ENST00000429738	DNAH11	Q96DT5	4516 aa		12.7	□□□□□ -0.38
MRPL28-203	ENST00000429738	IGHV4-4	A0A075B6R2	117 aa		12.7	□□□□□ -0.38
MRPL28-203	ENST00000429738	S100A7	P31151	101 aa		12.7	□□□□□ -0.38
MRPL28-203	ENST00000429738	TAS2R30	P59541	319 aa		12.7	□□□□□ -0.38
MRPL28-203	ENST00000429738	DLK1	P80370	383 aa		12.7	□□□□□ -0.38
MRPL28-203	ENST00000429738	PSG9	Q00887	426 aa		12.7	□□□□□ -0.38
MRPL28-203	ENST00000429738	IAH1	Q2TAA2	248 aa	Predicted RBP	12.7	□□□□□ -0.38
MRPL28-203	ENST00000429738	FAM78B	Q5VT40	261 aa		12.7	□□□□□ -0.38
MRPL28-203	ENST00000429738	EBLN2	Q6P2I7	272 aa		12.7	□□□□□ -0.38
MRPL28-203	ENST00000429738	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	12.7	□□□□□ -0.38
MRPL28-203	ENST00000429738	RNF126	Q9BV68	326 aa		12.7	□□□□□ -0.38
MRPL28-203	ENST00000429738	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	12.7	□□□□□ -0.38
MRPL28-203	ENST00000429738	SMCO3	A2RU48	225 aa		12.69	□□□□□ -0.38
MRPL28-203	ENST00000429738		K7EPK0	472 aa		12.69	□□□□□ -0.38
MRPL28-203	ENST00000429738	TSC22D2	O75157	780 aa		12.69	□□□□□ -0.38
MRPL28-203	ENST00000429738	IL5	P05113	134 aa		12.69	□□□□□ -0.38
MRPL28-203	ENST00000429738	METTL15P1	P0C7V9	234 aa		12.69	□□□□□ -0.38
MRPL28-203	ENST00000429738	MED14OS	P0DP75	135 aa		12.69	□□□□□ -0.38
MRPL28-203	ENST00000429738	AMTN	Q6UX39	209 aa		12.69	□□□□□ -0.38
MRPL28-203	ENST00000429738	SHANK2-AS3	Q9BTD1	123 aa		12.69	□□□□□ -0.38
MRPL28-203	ENST00000429738	SCRT1	Q9BWW7	348 aa		12.69	□□□□□ -0.38
MRPL28-203	ENST00000429738	C20orf85	Q9H1P6	137 aa		12.69	□□□□□ -0.38
MRPL28-203	ENST00000429738	NPVF	Q9HCQ7	196 aa		12.69	□□□□□ -0.38
MRPL28-203	ENST00000429738	DOK5	Q9P104	306 aa		12.69	□□□□□ -0.38
MRPL28-203	ENST00000429738	TRAV8-2	A0A0B4J237	113 aa		12.68	□□□□□ -0.38
MRPL28-203	ENST00000429738		A0A1B0GVY2	172 aa		12.68	□□□□□ -0.38
MRPL28-203	ENST00000429738	TMEM189	A5PLL7	270 aa		12.68	□□□□□ -0.38
MRPL28-203	ENST00000429738	AMBP	P02760	352 aa		12.68	□□□□□ -0.38
MRPL28-203	ENST00000429738	SELENOT	P62341	195 aa		12.68	□□□□□ -0.38
MRPL28-203	ENST00000429738	ZNF767P	Q75MW2	155 aa		12.68	□□□□□ -0.38
MRPL28-203	ENST00000429738	C1orf158	Q8N1D5	194 aa		12.68	□□□□□ -0.38
MRPL28-203	ENST00000429738	NDUFA13	Q9P0J0	144 aa		12.68	□□□□□ -0.38
MRPL28-203	ENST00000429738	DEFB131B	A0A096LNP1	70 aa		12.67	□□□□□ -0.38
MRPL28-203	ENST00000429738	LYRM1	O43325	122 aa		12.67	□□□□□ -0.38
MRPL28-203	ENST00000429738	SCGB1D2	O95969	90 aa		12.67	□□□□□ -0.38
MRPL28-203	ENST00000429738	LINC00869	P0C866	280 aa		12.67	□□□□□ -0.38
MRPL28-203	ENST00000429738	RAP2B	P61225	183 aa		12.67	□□□□□ -0.38
MRPL28-203	ENST00000429738	RRAS2	P62070	204 aa	Predicted RBP	12.67	□□□□□ -0.38
MRPL28-203	ENST00000429738	OR10P1	Q8NGE3	313 aa		12.67	□□□□□ -0.38
MRPL28-203	ENST00000429738	HIGD1A	Q9Y241	93 aa		12.67	□□□□□ -0.38
MRPL28-203	ENST00000429738	RFNG	Q9Y644	331 aa		12.67	□□□□□ -0.38
MRPL28-203	ENST00000429738	IGHV3OR16-12	A0A075B7B8	117 aa		12.66	□□□□□ -0.38
MRPL28-203	ENST00000429738	C7orf66	A4D0T2	115 aa		12.66	□□□□□ -0.38
MRPL28-203	ENST00000429738	HYPM	O75409	117 aa		12.66	□□□□□ -0.38
MRPL28-203	ENST00000429738	MBP	P02686	304 aa	Predicted RBP	12.66	□□□□□ -0.38
MRPL28-203	ENST00000429738	SPART-AS1	P0CW21	52 aa		12.66	□□□□□ -0.38
MRPL28-203	ENST00000429738	RPL7	P18124	248 aa	Known RBP	12.66	□□□□□ -0.38
MRPL28-203	ENST00000429738	ARL16	Q0P5N6	197 aa		12.66	□□□□□ -0.38
MRPL28-203	ENST00000429738	UHRF2	Q96PU4	802 aa		12.66	□□□□□ -0.38
MRPL28-203	ENST00000429738	GSKIP	Q9P0R6	139 aa		12.66	□□□□□ -0.38
MRPL28-203	ENST00000429738	GOLT1B	Q9Y3E0	138 aa		12.66	□□□□□ -0.38
MRPL28-203	ENST00000429738		A0A087X0K7	114 aa		12.65	□□□□□ -0.38
MRPL28-203	ENST00000429738	TCRB	P04435	133 aa		12.65	□□□□□ -0.38
MRPL28-203	ENST00000429738	IGFL4	Q6B9Z1	124 aa		12.65	□□□□□ -0.38
MRPL28-203	ENST00000429738	TEPP	Q6URK8	271 aa		12.65	□□□□□ -0.38
MRPL28-203	ENST00000429738	PATE2	Q6UY27	113 aa		12.65	□□□□□ -0.38
MRPL28-203	ENST00000429738	GGACT	Q9BVM4	153 aa		12.65	□□□□□ -0.38
MRPL28-203	ENST00000429738	MGAT4C	Q9UBM8	478 aa		12.65	□□□□□ -0.38
MRPL28-203	ENST00000429738	DKK2	Q9UBU2	259 aa		12.65	□□□□□ -0.38
MRPL28-203	ENST00000429738	MRPS12	O15235	138 aa	Known RBP	12.64	□□□□□ -0.39
MRPL28-203	ENST00000429738	OR5G3	P0C626	314 aa		12.64	□□□□□ -0.39
MRPL28-203	ENST00000429738	CNN1	P51911	297 aa	Known RBP	12.64	□□□□□ -0.39
MRPL28-203	ENST00000429738	SLC38A11	Q08AI6	406 aa		12.64	□□□□□ -0.39
MRPL28-203	ENST00000429738	IGF2BP2-AS1	Q96M15	143 aa		12.64	□□□□□ -0.39
MRPL28-203	ENST00000429738	ARL6	Q9H0F7	186 aa		12.64	□□□□□ -0.39
MRPL28-203	ENST00000429738	TEX48	A0A1B0GUV7	120 aa		12.63	□□□□□ -0.39
MRPL28-203	ENST00000429738	CCS	O14618	274 aa		12.63	□□□□□ -0.39
MRPL28-203	ENST00000429738	CRX	O43186	299 aa	Predicted RBP	12.63	□□□□□ -0.39
MRPL28-203	ENST00000429738	DUSP14	O95147	198 aa	Known RBP	12.63	□□□□□ -0.39
MRPL28-203	ENST00000429738	HBE1	P02100	147 aa		12.63	□□□□□ -0.39
MRPL28-203	ENST00000429738	CXCL3	P19876	107 aa		12.63	□□□□□ -0.39
MRPL28-203	ENST00000429738	EMP1	P54849	157 aa		12.63	□□□□□ -0.39
MRPL28-203	ENST00000429738	FGL1	Q08830	312 aa		12.63	□□□□□ -0.39
MRPL28-203	ENST00000429738	PXDC1	Q5TGL8	231 aa		12.63	□□□□□ -0.39
MRPL28-203	ENST00000429738	RNF182	Q8N6D2	247 aa		12.63	□□□□□ -0.39
MRPL28-203	ENST00000429738	OR11H7	Q8NGC8	314 aa		12.63	□□□□□ -0.39
MRPL28-203	ENST00000429738	ARV1	Q9H2C2	271 aa		12.63	□□□□□ -0.39
MRPL28-203	ENST00000429738	C11orf1	Q9H5F2	150 aa		12.63	□□□□□ -0.39
MRPL28-203	ENST00000429738	PKD1	P98161	4303 aa		12.62	□□□□□ -0.39
MRPL28-203	ENST00000429738	TRAV6	A0A075B6T7	132 aa		12.62	□□□□□ -0.39
MRPL28-203	ENST00000429738		A6NHS1	94 aa		12.62	□□□□□ -0.39
MRPL28-203	ENST00000429738	OXA1L	Q15070	435 aa		12.62	□□□□□ -0.39
MRPL28-203	ENST00000429738	FAM222A	Q5U5X8	452 aa		12.62	□□□□□ -0.39
MRPL28-203	ENST00000429738	S100A7A	Q86SG5	101 aa		12.62	□□□□□ -0.39
MRPL28-203	ENST00000429738	ZNF546	Q86UE3	836 aa		12.62	□□□□□ -0.39
MRPL28-203	ENST00000429738	ZNF431	Q8TF32	576 aa	Predicted RBP	12.62	□□□□□ -0.39
MRPL28-203	ENST00000429738	NDUFAF3	Q9BU61	184 aa		12.62	□□□□□ -0.39
MRPL28-203	ENST00000429738	CCDC32	Q9BV29	185 aa		12.62	□□□□□ -0.39
MRPL28-203	ENST00000429738	NUDT15	Q9NV35	164 aa		12.62	□□□□□ -0.39
MRPL28-203	ENST00000429738	ABCA13	Q86UQ4	5058 aa		12.61	□□□□□ -0.39
MRPL28-203	ENST00000429738	LOC102723971	A0A1B0GUV8	181 aa		12.61	□□□□□ -0.39
MRPL28-203	ENST00000429738	PRSS29P	A6NIE9	313 aa		12.61	□□□□□ -0.39
MRPL28-203	ENST00000429738	AGPAT2	O15120	278 aa		12.61	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms