RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 SMIM7Q9BQ49 75 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 NPVFQ9HCQ7 196 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 MANBALQ9NQG1 85 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 IGKV3-7A0A075B6H7 116 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 INS-IGF2F8WCM5 200 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 IGHG4P01861 327 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 PFN1P07737 140 aaKnown RBP7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 LINC00869P0C866 280 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 PSMB3P49720 205 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 SLURP1P55000 103 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 LYZP61626 148 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 RPP30P78346 268 aaKnown RBP7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 USF2Q15853 346 aaPredicted RBP7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 TMEM241Q24JQ0 296 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 PATE2Q6UY27 113 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 C16orf82Q7Z2V1 217 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 OR1B1Q8NGR6 318 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 ZNF502Q8TBZ5 544 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 GATAD1Q8WUU5 269 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 ACTR3CQ9C0K3 210 aaPredicted RBP7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 PXMP4Q9Y6I8 212 aa7.33□□□□□ -1.24
HMGCLL1-206ENST00000428842 IGHV4OR15-8A0A075B7B6 117 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 A0A087WW49 117 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 ZNF320A2RRD8 509 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 LY86O95711 162 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 S100A2P29034 98 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 RPL15P61313 204 aaKnown RBP7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 RPL23P62829 140 aaKnown RBP7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 ATP5G2Q06055 141 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 NECAP1Q8NC96 275 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 TMEM116Q8NCL8 245 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 OR51G1Q8NGK1 321 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 RNASEH2CQ8TDP1 164 aaKnown RBP7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 AGRNO00468 2067 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 BMPR1BO00238 502 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 IL4P05112 153 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 OR5G3P0C626 314 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 DNLZQ5SXM8 178 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 PVRIGQ6DKI7 326 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 TEX38Q6PEX7 206 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 TMEM144Q7Z5S9 345 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 Q8N2B8 174 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 KLHL30-AS1Q8NEE0 82 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 RAB24Q969Q5 203 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 SRD5A3Q9H8P0 318 aa7.32□□□□□ -1.24
HMGCLL1-206ENST00000428842 C17orf112F2Z3M2 114 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 PPP1R2P9O14990 202 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 OR10J4P0C629 311 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 ADIRFQ15847 76 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 GFI1BQ5VTD9 330 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 MIR17HGQ75NE6 70 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 TMEM86BQ8N661 226 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 PARLQ9H300 379 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 ARL3P36405 182 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 PROK1P58294 105 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 TM4SF20Q53R12 229 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 IGFL4Q6B9Z1 124 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 LURAP1LQ8IV03 231 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 ZNF491Q8N8L2 437 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 ZNF709Q8N972 641 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 OR4X1Q8NH49 305 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 GPR61Q9BZJ8 451 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 SLC45A2Q9UMX9 530 aa7.31□□□□□ -1.24
HMGCLL1-206ENST00000428842 RD3LP0DJH9 198 aa7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 PYYP10082 97 aa7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 CRIP2P52943 208 aaPredicted RBP7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 MFAP4P55083 255 aa7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 SYNJ2BPP57105 145 aa7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 ACOT6Q3I5F7 207 aaPredicted RBP7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 TEX29Q8N6K0 151 aa7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 OR11H1Q8NG94 326 aa7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 OR10D4PQ8NGN7 298 aa7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 OR4F5Q8NH21 305 aa7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 RPUSD4Q96CM3 377 aaKnown RBP7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 ANAPC16Q96DE5 110 aa7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 OR4F4Q96R69 305 aa7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 TCRBV4S1A1TA0A5B7 111 aa7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 CDC34P49427 236 aaPredicted RBP7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 FAM78BQ5VT40 261 aa7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 TOMM20LQ6UXN7 152 aa7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 C17orf77Q96MU5 243 aa7.3□□□□□ -1.24
HMGCLL1-206ENST00000428842 PAGE4O60829 102 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 MPDU1O75352 247 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 NPPCP23582 126 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 GPX4P36969 197 aaPredicted RBP7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 PRR20EP86478 221 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 PRR20CP86479 221 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 PRR20DP86480 221 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 PRR20BP86481 221 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 PRR20AP86496 221 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 FAM209BQ5JX69 171 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 CDPF1Q6NVV7 123 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 EEF1AKMT3Q96AZ1 226 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 ASCL2Q99929 193 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 THYN1Q9P016 225 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 H7BYZ3 331 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 GGCTO75223 188 aaKnown RBP7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 GALR1P47211 349 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 DEFB1P60022 68 aa7.29□□□□□ -1.24
HMGCLL1-206ENST00000428842 SLC35B1P78383 322 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms