RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 ZNF320A2RRD8 509 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 TMEM218A2RU14 115 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 C9JQL5 133 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 HAX1O00165 279 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 BUB3O43684 328 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 NBEAP1P0C6P0 100 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 HIST1H1EP10412 219 aaKnown RBP9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 CD28P10747 220 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 RPL7P18124 248 aaKnown RBP9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 ZP3P21754 424 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 UBE2G2P60604 165 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 KHDC1LQ5JSQ8 128 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 CST9LP1Q5W188 147 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 UNQ9165/PRO28630Q6UXU0 137 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 KLHL30-AS1Q8NEE0 82 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 GPR82Q96P67 336 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 NKX6-2Q9C056 277 aaPredicted RBP9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 SLC35B3Q9H1N7 401 aa9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 TSSC4Q9Y5U2 329 aaPredicted RBP9.74□□□□□ -0.85
HMGB3P4-201ENST00000428776 C2CD3Q4AC94 2353 aa9.73□□□□□ -0.85
HMGB3P4-201ENST00000428776 FAM74A7A6NL05 159 aa9.73□□□□□ -0.85
HMGB3P4-201ENST00000428776 C11orf94C9JXX5 98 aa9.73□□□□□ -0.85
HMGB3P4-201ENST00000428776 LGALS9O00182 355 aa9.73□□□□□ -0.85
HMGB3P4-201ENST00000428776 SRP19P09132 144 aaKnown RBP9.73□□□□□ -0.85
HMGB3P4-201ENST00000428776 SFTA3P0C7M3 94 aa9.73□□□□□ -0.85
HMGB3P4-201ENST00000428776 SRSF2Q01130 221 aaKnown RBP9.73□□□□□ -0.85
HMGB3P4-201ENST00000428776 REC114Q7Z4M0 266 aa9.73□□□□□ -0.85
HMGB3P4-201ENST00000428776 OR8I2Q8N0Y5 310 aa9.73□□□□□ -0.85
HMGB3P4-201ENST00000428776 OR4F17Q8NGA8 305 aa9.73□□□□□ -0.85
HMGB3P4-201ENST00000428776 OR4F4Q96R69 305 aa9.73□□□□□ -0.85
HMGB3P4-201ENST00000428776 DAZ1Q9NQZ3 744 aaKnown RBP9.73□□□□□ -0.85
HMGB3P4-201ENST00000428776 UFC1Q9Y3C8 167 aa9.73□□□□□ -0.85
HMGB3P4-201ENST00000428776 YTHDF2Q9Y5A9 579 aaKnown RBP9.73□□□□□ -0.85
HMGB3P4-201ENST00000428776 TEP1Q99973 2627 aaKnown RBP9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 A0A1W2PS18 150 aa9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 LINC01619G3V211 115 aa9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 TMEM250H0YL14 139 aa9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 MRPS12O15235 138 aaKnown RBP9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 ZNF207O43670 478 aaKnown RBP9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 PDE6DO43924 150 aa9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 IGLC2P0DOY2 106 aa9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 HOXD3P31249 432 aaPredicted RBP9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 CD81P60033 236 aa9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 C18orf65Q6ZTR6 163 aa9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 C1QL4Q86Z23 238 aa9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 OR11H1Q8NG94 326 aa9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 OR1N2Q8NGR9 330 aa9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 DPF1Q92782 380 aa9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 GRAMD2BQ96HH9 432 aa9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 CUBNO60494 3623 aa9.72□□□□□ -0.85
HMGB3P4-201ENST00000428776 TRBV19A0A075B6N1 114 aa9.71□□□□□ -0.86
HMGB3P4-201ENST00000428776 IGHV7-4-1A0A0J9YVY3 117 aa9.71□□□□□ -0.86
HMGB3P4-201ENST00000428776 A8MWP6 167 aa9.71□□□□□ -0.86
HMGB3P4-201ENST00000428776 F6UZH7 168 aa9.71□□□□□ -0.86
HMGB3P4-201ENST00000428776 H3BQ15 152 aa9.71□□□□□ -0.86
HMGB3P4-201ENST00000428776 APOHP02749 345 aaPredicted RBP9.71□□□□□ -0.86
HMGB3P4-201ENST00000428776 ATP5G3P48201 142 aa9.71□□□□□ -0.86
HMGB3P4-201ENST00000428776 FOXL1Q12952 345 aa9.71□□□□□ -0.86
HMGB3P4-201ENST00000428776 KLF5Q13887 457 aaPredicted RBP9.71□□□□□ -0.86
HMGB3P4-201ENST00000428776 C16orf54Q6UWD8 224 aa9.71□□□□□ -0.86
HMGB3P4-201ENST00000428776 BLNKQ8WV28 456 aa9.71□□□□□ -0.86
HMGB3P4-201ENST00000428776 LINC00052Q96N35 136 aa9.71□□□□□ -0.86
HMGB3P4-201ENST00000428776 CITED2Q99967 270 aaPredicted RBP9.71□□□□□ -0.86
HMGB3P4-201ENST00000428776 SEC11CQ9BY50 192 aa9.71□□□□□ -0.86
HMGB3P4-201ENST00000428776 ZNF586Q9NXT0 402 aa9.71□□□□□ -0.86
HMGB3P4-201ENST00000428776 SMPXQ9UHP9 88 aa9.71□□□□□ -0.86
HMGB3P4-201ENST00000428776 F8W036 122 aa9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 ATF4P18848 351 aaPredicted RBP9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 BMI1P35226 326 aa9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 GALR1P47211 349 aa9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 RANP62826 216 aaKnown RBP9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 PDE6HQ13956 83 aa9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 DEFB136Q30KP8 78 aa9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 TM4SF20Q53R12 229 aa9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 SOHLH1Q5JUK2 328 aa9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 C10orf91Q5T1B1 145 aa9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 C8orf86Q6ZUL3 223 aa9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 CCDC28AQ8IWP9 274 aa9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 LYPD1Q8N2G4 141 aa9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 C11orf44Q8N8P7 122 aa9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 CYB561D1Q8N8Q1 229 aa9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 TCEAL7Q9BRU2 100 aa9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 ELOVL1Q9BW60 279 aa9.7□□□□□ -0.86
HMGB3P4-201ENST00000428776 IGHV3OR16-13A0A075B7E8 117 aa9.69□□□□□ -0.86
HMGB3P4-201ENST00000428776 A0A087X0K7 114 aa9.69□□□□□ -0.86
HMGB3P4-201ENST00000428776 IGHV3-49A0A0A0MS15 119 aa9.69□□□□□ -0.86
HMGB3P4-201ENST00000428776 IGHV3-74A0A0B4J1X5 117 aa9.69□□□□□ -0.86
HMGB3P4-201ENST00000428776 IGHV3-66A0A0C4DH42 116 aa9.69□□□□□ -0.86
HMGB3P4-201ENST00000428776 ZNF253O75346 499 aa9.69□□□□□ -0.86
HMGB3P4-201ENST00000428776 MYCNOSP40205 109 aa9.69□□□□□ -0.86
HMGB3P4-201ENST00000428776 MEOX2P50222 304 aa9.69□□□□□ -0.86
HMGB3P4-201ENST00000428776 SYNJ2BPP57105 145 aa9.69□□□□□ -0.86
HMGB3P4-201ENST00000428776 SUMO1P63165 101 aaKnown RBP9.69□□□□□ -0.86
HMGB3P4-201ENST00000428776 GLMPQ8WWB7 406 aa9.69□□□□□ -0.86
HMGB3P4-201ENST00000428776 SMAD5-AS1Q9Y6J3 95 aa9.69□□□□□ -0.86
HMGB3P4-201ENST00000428776 A0A1W2PRX2 142 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 TMEM213A2RRL7 107 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 ZNF785A8K8V0 405 aa9.68□□□□□ -0.86
HMGB3P4-201ENST00000428776 GGTLC3B5MD39 225 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms