RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 M0R2N4 97 aa12.17□□□□□ -0.46
TRIM39-209ENST00000428728 RRN3P1Q2M238 152 aa12.17□□□□□ -0.46
TRIM39-209ENST00000428728 AMTNQ6UX39 209 aa12.17□□□□□ -0.46
TRIM39-209ENST00000428728 CYP2G1PQ6ZSU1 146 aa12.17□□□□□ -0.46
TRIM39-209ENST00000428728 TMEM144Q7Z5S9 345 aa12.17□□□□□ -0.46
TRIM39-209ENST00000428728 UBE2DNLQ8IWF7 75 aa12.17□□□□□ -0.46
TRIM39-209ENST00000428728 GPR82Q96P67 336 aa12.17□□□□□ -0.46
TRIM39-209ENST00000428728 TMEM208Q9BTX3 173 aa12.17□□□□□ -0.46
TRIM39-209ENST00000428728 RBM38Q9H0Z9 239 aaKnown RBP12.17□□□□□ -0.46
TRIM39-209ENST00000428728 PSENENQ9NZ42 101 aa12.17□□□□□ -0.46
TRIM39-209ENST00000428728 A8MTW9 85 aa12.16□□□□□ -0.46
TRIM39-209ENST00000428728 H3BRN7 92 aa12.16□□□□□ -0.46
TRIM39-209ENST00000428728 CCNKO75909 580 aa12.16□□□□□ -0.46
TRIM39-209ENST00000428728 NDUFB6O95139 128 aa12.16□□□□□ -0.46
TRIM39-209ENST00000428728 IL5P05113 134 aa12.16□□□□□ -0.46
TRIM39-209ENST00000428728 S100A7P31151 101 aa12.16□□□□□ -0.46
TRIM39-209ENST00000428728 RRAS2P62070 204 aaPredicted RBP12.16□□□□□ -0.46
TRIM39-209ENST00000428728 ID3Q02535 119 aa12.16□□□□□ -0.46
TRIM39-209ENST00000428728 BAK1Q16611 211 aa12.16□□□□□ -0.46
TRIM39-209ENST00000428728 SPINK13Q1W4C9 94 aa12.16□□□□□ -0.46
TRIM39-209ENST00000428728 OR4D5Q8NGN0 318 aa12.16□□□□□ -0.46
TRIM39-209ENST00000428728 SLC25A39Q9BZJ4 359 aaPredicted RBP12.16□□□□□ -0.46
TRIM39-209ENST00000428728 HIGD1AQ9Y241 93 aa12.16□□□□□ -0.46
TRIM39-209ENST00000428728 M0R2Z0 102 aa12.15□□□□□ -0.46
TRIM39-209ENST00000428728 SCGB1D2O95969 90 aa12.15□□□□□ -0.46
TRIM39-209ENST00000428728 IFNA21P01568 189 aa12.15□□□□□ -0.46
TRIM39-209ENST00000428728 LINC00869P0C866 280 aa12.15□□□□□ -0.46
TRIM39-209ENST00000428728 CNN1P51911 297 aaKnown RBP12.15□□□□□ -0.46
TRIM39-209ENST00000428728 RAP2BP61225 183 aa12.15□□□□□ -0.46
TRIM39-209ENST00000428728 LINC00336Q6ZUF6 198 aa12.15□□□□□ -0.46
TRIM39-209ENST00000428728 ZNF738Q8NE65 137 aa12.15□□□□□ -0.46
TRIM39-209ENST00000428728 OR11H7Q8NGC8 314 aa12.15□□□□□ -0.46
TRIM39-209ENST00000428728 IGF2BP2-AS1Q96M15 143 aa12.15□□□□□ -0.46
TRIM39-209ENST00000428728 UHRF2Q96PU4 802 aa12.15□□□□□ -0.46
TRIM39-209ENST00000428728 SHANK2-AS3Q9BTD1 123 aa12.15□□□□□ -0.46
TRIM39-209ENST00000428728 KRTAP17-1Q9BYP8 105 aa12.15□□□□□ -0.46
TRIM39-209ENST00000428728 HECTD4Q9Y4D8 3996 aa12.14□□□□□ -0.47
TRIM39-209ENST00000428728 TRAV8-2A0A0B4J237 113 aa12.14□□□□□ -0.47
TRIM39-209ENST00000428728 NAP1L6A6NFF2 107 aa12.14□□□□□ -0.47
TRIM39-209ENST00000428728 OR5G3P0C626 314 aa12.14□□□□□ -0.47
TRIM39-209ENST00000428728 OR4E1P0C645 316 aa12.14□□□□□ -0.47
TRIM39-209ENST00000428728 METTL15P1P0C7V9 234 aa12.14□□□□□ -0.47
TRIM39-209ENST00000428728 ANXA7P20073 488 aaKnown RBP12.14□□□□□ -0.47
TRIM39-209ENST00000428728 DAD1P61803 113 aa12.14□□□□□ -0.47
TRIM39-209ENST00000428728 C4orf46Q504U0 113 aa12.14□□□□□ -0.47
TRIM39-209ENST00000428728 BAP18Q8IXM2 172 aa12.14□□□□□ -0.47
TRIM39-209ENST00000428728 IGLV2-18A0A075B6J9 118 aa12.13□□□□□ -0.47
TRIM39-209ENST00000428728 PMS2P5A8MQ11 134 aa12.13□□□□□ -0.47
TRIM39-209ENST00000428728 ZNF705GA8MUZ8 300 aaPredicted RBP12.13□□□□□ -0.47
TRIM39-209ENST00000428728 DUSP14O95147 198 aaKnown RBP12.13□□□□□ -0.47
TRIM39-209ENST00000428728 INSP01308 110 aa12.13□□□□□ -0.47
TRIM39-209ENST00000428728 PRM2P04554 102 aa12.13□□□□□ -0.47
TRIM39-209ENST00000428728 PRB4P10163 310 aaPredicted RBP12.13□□□□□ -0.47
TRIM39-209ENST00000428728 RPL7P18124 248 aaKnown RBP12.13□□□□□ -0.47
TRIM39-209ENST00000428728 FAM210BQ96KR6 192 aa12.13□□□□□ -0.47
TRIM39-209ENST00000428728 HYPMO75409 117 aa12.12□□□□□ -0.47
TRIM39-209ENST00000428728 DLK1P80370 383 aa12.12□□□□□ -0.47
TRIM39-209ENST00000428728 OXA1LQ15070 435 aa12.12□□□□□ -0.47
TRIM39-209ENST00000428728 IAH1Q2TAA2 248 aaPredicted RBP12.12□□□□□ -0.47
TRIM39-209ENST00000428728 TMEM88Q6PEY1 159 aa12.12□□□□□ -0.47
TRIM39-209ENST00000428728 SMIM8Q96KF7 97 aa12.12□□□□□ -0.47
TRIM39-209ENST00000428728 TRAV12-2A0A075B6T6 113 aa12.11□□□□□ -0.47
TRIM39-209ENST00000428728 CRXO43186 299 aaPredicted RBP12.11□□□□□ -0.47
TRIM39-209ENST00000428728 BTCP35070 178 aa12.11□□□□□ -0.47
TRIM39-209ENST00000428728 SELENOTP62341 195 aa12.11□□□□□ -0.47
TRIM39-209ENST00000428728 HIST1H1AQ02539 215 aaPredicted RBP12.11□□□□□ -0.47
TRIM39-209ENST00000428728 SLC38A11Q08AI6 406 aa12.11□□□□□ -0.47
TRIM39-209ENST00000428728 TMEM14EPQ6UXP3 125 aa12.11□□□□□ -0.47
TRIM39-209ENST00000428728 SDHCQ99643 169 aaPredicted RBP12.11□□□□□ -0.47
TRIM39-209ENST00000428728 ARL6Q9H0F7 186 aa12.11□□□□□ -0.47
TRIM39-209ENST00000428728 MGAT4CQ9UBM8 478 aa12.11□□□□□ -0.47
TRIM39-209ENST00000428728 A0A1B0GVY2 172 aa12.1□□□□□ -0.47
TRIM39-209ENST00000428728 PRSS29PA6NIE9 313 aa12.1□□□□□ -0.47
TRIM39-209ENST00000428728 CENPXA8MT69 81 aa12.1□□□□□ -0.47
TRIM39-209ENST00000428728 BOLA2-SMG1P6H3BVE0 249 aa12.1□□□□□ -0.47
TRIM39-209ENST00000428728 ZNF701M0R085 212 aaPredicted RBP12.1□□□□□ -0.47
TRIM39-209ENST00000428728 RTL8CO15255 209 aa12.1□□□□□ -0.47
TRIM39-209ENST00000428728 PLP1P60201 277 aa12.1□□□□□ -0.47
TRIM39-209ENST00000428728 ZBTB8BQ8NAP8 495 aaPredicted RBP12.1□□□□□ -0.47
TRIM39-209ENST00000428728 OR10P1Q8NGE3 313 aa12.1□□□□□ -0.47
TRIM39-209ENST00000428728 LRRC20Q8TCA0 184 aa12.1□□□□□ -0.47
TRIM39-209ENST00000428728 GSKIPQ9P0R6 139 aa12.1□□□□□ -0.47
TRIM39-209ENST00000428728 RCL1Q9Y2P8 373 aaKnown RBP12.1□□□□□ -0.47
TRIM39-209ENST00000428728 RHOBP62745 196 aa12.09□□□□□ -0.47
TRIM39-209ENST00000428728 TEPPQ6URK8 271 aa12.09□□□□□ -0.47
TRIM39-209ENST00000428728 ARV1Q9H2C2 271 aa12.09□□□□□ -0.47
TRIM39-209ENST00000428728 NPVFQ9HCQ7 196 aa12.09□□□□□ -0.47
TRIM39-209ENST00000428728 PPP1R14DQ9NXH3 145 aa12.09□□□□□ -0.47
TRIM39-209ENST00000428728 A0A087X0K7 114 aa12.08□□□□□ -0.48
TRIM39-209ENST00000428728 FNDC10F2Z333 226 aa12.08□□□□□ -0.48
TRIM39-209ENST00000428728 CCSO14618 274 aa12.08□□□□□ -0.48
TRIM39-209ENST00000428728 TSC22D2O75157 780 aa12.08□□□□□ -0.48
TRIM39-209ENST00000428728 CXCL3P19876 107 aa12.08□□□□□ -0.48
TRIM39-209ENST00000428728 LGALS9BQ3B8N2 356 aa12.08□□□□□ -0.48
TRIM39-209ENST00000428728 PATE2Q6UY27 113 aa12.08□□□□□ -0.48
TRIM39-209ENST00000428728 S100A7AQ86SG5 101 aa12.08□□□□□ -0.48
TRIM39-209ENST00000428728 OR8A1Q8NGG7 326 aa12.08□□□□□ -0.48
TRIM39-209ENST00000428728 GOSR2O14653 212 aa12.07□□□□□ -0.48
TRIM39-209ENST00000428728 SNRPCP09234 159 aaKnown RBP12.07□□□□□ -0.48
TRIM39-209ENST00000428728 DEFB130BP0DP73 79 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms