RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 LRRC20Q8TCA0 184 aa10.86□□□□□ -0.67
SGCE-204ENST00000428696 TMEM37Q8WXS4 190 aa10.86□□□□□ -0.67
SGCE-204ENST00000428696 MFFQ9GZY8 342 aa10.86□□□□□ -0.67
SGCE-204ENST00000428696 NRN1Q9NPD7 142 aa10.86□□□□□ -0.67
SGCE-204ENST00000428696 TNFSF18Q9UNG2 199 aa10.86□□□□□ -0.67
SGCE-204ENST00000428696 H3BRN7 92 aa10.85□□□□□ -0.67
SGCE-204ENST00000428696 LCE2BO14633 110 aa10.85□□□□□ -0.67
SGCE-204ENST00000428696 ATF4P18848 351 aaPredicted RBP10.85□□□□□ -0.67
SGCE-204ENST00000428696 ODF3L2Q3SX64 289 aa10.85□□□□□ -0.67
SGCE-204ENST00000428696 GCSAMLQ5JQS6 135 aa10.85□□□□□ -0.67
SGCE-204ENST00000428696 FFAR4Q5NUL3 377 aa10.85□□□□□ -0.67
SGCE-204ENST00000428696 PFDN5Q99471 154 aa10.85□□□□□ -0.67
SGCE-204ENST00000428696 KCNIP2Q9NS61 270 aa10.85□□□□□ -0.67
SGCE-204ENST00000428696 TRAV5A0A0B4J249 113 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 K7EQG2 157 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 RPL35AP18077 110 aaKnown RBP10.84□□□□□ -0.67
SGCE-204ENST00000428696 RPL7P18124 248 aaKnown RBP10.84□□□□□ -0.67
SGCE-204ENST00000428696 SNRPD3P62318 126 aaKnown RBP10.84□□□□□ -0.67
SGCE-204ENST00000428696 PSMG4Q5JS54 123 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 HSD17B11Q8NBQ5 300 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 C16orf92Q96LL3 132 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 MAP6D1Q9H9H5 199 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 RNF24Q9Y225 148 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 RFNGQ9Y644 331 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 BORCS7-ASMTA0A0B4J1R7 106 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 RNF222A6NCQ9 220 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 G3V3Q6 166 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 ID1P41134 155 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 ZNF266Q14584 549 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 FAM78BQ5VT40 261 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 MORN5Q5VZ52 161 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 DCANP1Q8TF63 244 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 GPR82Q96P67 336 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 C19orf73Q9NVV2 129 aa10.84□□□□□ -0.67
SGCE-204ENST00000428696 TRAV2A0A0B4J234 112 aa10.83□□□□□ -0.68
SGCE-204ENST00000428696 A0A1B0GVG6 124 aa10.83□□□□□ -0.68
SGCE-204ENST00000428696 RPL7L1Q6DKI1 246 aaKnown RBP10.83□□□□□ -0.68
SGCE-204ENST00000428696 AKAP14Q86UN6 197 aa10.83□□□□□ -0.68
SGCE-204ENST00000428696 SBSPONQ8IVN8 264 aa10.83□□□□□ -0.68
SGCE-204ENST00000428696 GATAD1Q8WUU5 269 aa10.83□□□□□ -0.68
SGCE-204ENST00000428696 B9D2Q9BPU9 175 aa10.83□□□□□ -0.68
SGCE-204ENST00000428696 LOC102724200A0A096LPH7 203 aaPredicted RBP10.82□□□□□ -0.68
SGCE-204ENST00000428696 RBMY1BA6NDE4 496 aaKnown RBP10.82□□□□□ -0.68
SGCE-204ENST00000428696 RBMY1EA6NEQ0 496 aaKnown RBP10.82□□□□□ -0.68
SGCE-204ENST00000428696 H3BTX0 84 aa10.82□□□□□ -0.68
SGCE-204ENST00000428696 RBMY1DP0C7P1 496 aaKnown RBP10.82□□□□□ -0.68
SGCE-204ENST00000428696 IGFL4Q6B9Z1 124 aa10.82□□□□□ -0.68
SGCE-204ENST00000428696 BPIFA4PQ86YQ2 179 aa10.82□□□□□ -0.68
SGCE-204ENST00000428696 OR11H4Q8NGC9 324 aa10.82□□□□□ -0.68
SGCE-204ENST00000428696 ST6GAL2Q96JF0 529 aa10.82□□□□□ -0.68
SGCE-204ENST00000428696 CITED4Q96RK1 184 aa10.82□□□□□ -0.68
SGCE-204ENST00000428696 KNCNA6PVL3 124 aa10.81□□□□□ -0.68
SGCE-204ENST00000428696 MEOX2P50222 304 aa10.81□□□□□ -0.68
SGCE-204ENST00000428696 ACTL10Q5JWF8 245 aa10.81□□□□□ -0.68
SGCE-204ENST00000428696 SPATA31B1PQ5VZV4 182 aa10.81□□□□□ -0.68
SGCE-204ENST00000428696 STHQ8IWL8 128 aa10.81□□□□□ -0.68
SGCE-204ENST00000428696 SEPSECSQ9HD40 501 aaKnown RBP10.81□□□□□ -0.68
SGCE-204ENST00000428696 ACOT6Q3I5F7 207 aaPredicted RBP10.8□□□□□ -0.68
SGCE-204ENST00000428696 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.8□□□□□ -0.68
SGCE-204ENST00000428696 MIR17HGQ75NE6 70 aa10.8□□□□□ -0.68
SGCE-204ENST00000428696 PARD6GQ9BYG4 376 aaPredicted RBP10.8□□□□□ -0.68
SGCE-204ENST00000428696 A0A1W2PPV4 95 aa10.79□□□□□ -0.68
SGCE-204ENST00000428696 TAAR5O14804 337 aa10.79□□□□□ -0.68
SGCE-204ENST00000428696 PFDN1O60925 122 aa10.79□□□□□ -0.68
SGCE-204ENST00000428696 EIF3GO75821 320 aaKnown RBP eCLIP10.79□□□□□ -0.68
SGCE-204ENST00000428696 IGKV3-20P01619 116 aa10.79□□□□□ -0.68
SGCE-204ENST00000428696 ATP6V0CP27449 155 aa10.79□□□□□ -0.68
SGCE-204ENST00000428696 DEFB1P60022 68 aa10.79□□□□□ -0.68
SGCE-204ENST00000428696 HAGHQ16775 308 aa10.79□□□□□ -0.68
SGCE-204ENST00000428696 RNF182Q8N6D2 247 aa10.79□□□□□ -0.68
SGCE-204ENST00000428696 C17orf77Q96MU5 243 aa10.79□□□□□ -0.68
SGCE-204ENST00000428696 SH3BGRL3Q9H299 93 aa10.79□□□□□ -0.68
SGCE-204ENST00000428696 PRKDCP78527 4128 aaKnown RBP10.79□□□□□ -0.68
SGCE-204ENST00000428696 A0A0D9SG52 128 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 HMSDA8MTL9 139 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 A8MZ25 164 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 ISLRO14498 428 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 JTBO76095 146 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 PRB4P10163 310 aaPredicted RBP10.78□□□□□ -0.68
SGCE-204ENST00000428696 PSMB3P49720 205 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 RHOBP62745 196 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 SAMD13Q5VXD3 122 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 FAM122CQ6P4D5 195 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 KCNRGQ8N5I3 272 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 OR10G4Q8NGN3 311 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 OR10G9Q8NGN4 311 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 OR10G7Q8NGN6 311 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 BLNKQ8WV28 456 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 ARPC5LQ9BPX5 153 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 FAM110AQ9BQ89 295 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 ZMAT4Q9H898 229 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 TIMM9Q9Y5J7 89 aa10.78□□□□□ -0.68
SGCE-204ENST00000428696 KANTRA0A1W2PQU2 76 aa10.77□□□□□ -0.68
SGCE-204ENST00000428696 H3BQ15 152 aa10.77□□□□□ -0.68
SGCE-204ENST00000428696 HMGB3O15347 200 aaKnown RBP10.77□□□□□ -0.68
SGCE-204ENST00000428696 OR7C2O60412 319 aa10.77□□□□□ -0.68
SGCE-204ENST00000428696 PYYP10082 97 aa10.77□□□□□ -0.68
SGCE-204ENST00000428696 CXCL2P19875 107 aa10.77□□□□□ -0.68
SGCE-204ENST00000428696 APOC4P55056 127 aa10.77□□□□□ -0.68
SGCE-204ENST00000428696 RAB2AP61019 212 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms