RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 TMEM231Q9H6L2 316 aa6.99□□□□□ -1.29
NR1I3-209ENST00000428574 DAZ1Q9NQZ3 744 aaKnown RBP6.99□□□□□ -1.29
NR1I3-209ENST00000428574 UFC1Q9Y3C8 167 aa6.99□□□□□ -1.29
NR1I3-209ENST00000428574 LY96Q9Y6Y9 160 aa6.99□□□□□ -1.29
NR1I3-209ENST00000428574 S4R3C0 116 aa6.99□□□□□ -1.29
NR1I3-209ENST00000428574 HIVEP2P31629 2446 aa6.99□□□□□ -1.29
NR1I3-209ENST00000428574 SVEP1Q4LDE5 3571 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 NOTCH2Q04721 2471 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 TRBV19A0A075B6N1 114 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 SERTM2A0A1B0GWG4 89 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 CLPSL1A2RUU4 121 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 B4DEV8 164 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 C9JQL5 133 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 MRPS12O15235 138 aaKnown RBP6.98□□□□□ -1.29
NR1I3-209ENST00000428574 BUB3O43684 328 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 IGHV3-23P01764 117 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 S100A9P06702 114 aaKnown RBP6.98□□□□□ -1.29
NR1I3-209ENST00000428574 ADCYAP1P18509 176 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 GALR1P47211 349 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 DEFA5Q01523 94 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 RHEBQ15382 184 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 CST9LP1Q5W188 147 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 FAM90A2PQ658T7 463 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 ZNF329Q86UD4 541 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 CYB561D1Q8N8Q1 229 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 C5orf17Q8NAS9 161 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 HIST1H2BAQ96A08 127 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 SMIM12Q96EX1 92 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 GRAMD2BQ96HH9 432 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 GNB4Q9HAV0 340 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 OTORQ9NRC9 128 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 PRELID1Q9Y255 219 aa6.98□□□□□ -1.29
NR1I3-209ENST00000428574 YTHDF2Q9Y5A9 579 aaKnown RBP6.98□□□□□ -1.29
NR1I3-209ENST00000428574 TRAV5A0A0B4J249 113 aa6.97□□□□□ -1.29
NR1I3-209ENST00000428574 FBLL1A6NHQ2 334 aaKnown RBP6.97□□□□□ -1.29
NR1I3-209ENST00000428574 GGTLC3B5MD39 225 aa6.97□□□□□ -1.29
NR1I3-209ENST00000428574 C9JCJ5 164 aa6.97□□□□□ -1.29
NR1I3-209ENST00000428574 INAFM1C9JVW0 142 aa6.97□□□□□ -1.29
NR1I3-209ENST00000428574 APOC3P02656 99 aa6.97□□□□□ -1.29
NR1I3-209ENST00000428574 RPLP1P05386 114 aaKnown RBP6.97□□□□□ -1.29
NR1I3-209ENST00000428574 OR10J4P0C629 311 aa6.97□□□□□ -1.29
NR1I3-209ENST00000428574 PSG9Q00887 426 aa6.97□□□□□ -1.29
NR1I3-209ENST00000428574 LINC01006Q8NI28 216 aa6.97□□□□□ -1.29
NR1I3-209ENST00000428574 MXRA5Q9NR99 2828 aa6.97□□□□□ -1.29
NR1I3-209ENST00000428574 CELSR1Q9NYQ6 3014 aa6.97□□□□□ -1.29
NR1I3-209ENST00000428574 TRBV6-1A0A0K0K1D8 114 aa6.96□□□□□ -1.3
NR1I3-209ENST00000428574 PPP5D1E7EU14 171 aa6.96□□□□□ -1.3
NR1I3-209ENST00000428574 PYYP10082 97 aa6.96□□□□□ -1.3
NR1I3-209ENST00000428574 ATP5G3P48201 142 aa6.96□□□□□ -1.3
NR1I3-209ENST00000428574 TAS2R60P59551 318 aa6.96□□□□□ -1.3
NR1I3-209ENST00000428574 UBE2G2P60604 165 aa6.96□□□□□ -1.3
NR1I3-209ENST00000428574 RPEL1Q2QD12 228 aa6.96□□□□□ -1.3
NR1I3-209ENST00000428574 C1QL4Q86Z23 238 aa6.96□□□□□ -1.3
NR1I3-209ENST00000428574 OR8I2Q8N0Y5 310 aa6.96□□□□□ -1.3
NR1I3-209ENST00000428574 C2CD4CQ8TF44 421 aa6.96□□□□□ -1.3
NR1I3-209ENST00000428574 MRPL53Q96EL3 112 aaKnown RBP6.96□□□□□ -1.3
NR1I3-209ENST00000428574 DUX5Q96PT3 197 aa6.96□□□□□ -1.3
NR1I3-209ENST00000428574 SMIM7Q9BQ49 75 aa6.96□□□□□ -1.3
NR1I3-209ENST00000428574 SLC50A1Q9BRV3 221 aa6.96□□□□□ -1.3
NR1I3-209ENST00000428574 PARLQ9H300 379 aa6.96□□□□□ -1.3
NR1I3-209ENST00000428574 NAT8Q9UHE5 227 aa6.96□□□□□ -1.3
NR1I3-209ENST00000428574 TLN2Q9Y4G6 2542 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 A0A087WWC5 75 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 HELTA6NFD8 242 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 ZNF727A8MUV8 499 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 H3BQ15 152 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 TRBV12-3P01733 135 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 IGHV3-11P01762 117 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 ATF4P18848 351 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-209ENST00000428574 SUMO1P63165 101 aaKnown RBP6.95□□□□□ -1.3
NR1I3-209ENST00000428574 TMEM241Q24JQ0 296 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 C16orf54Q6UWD8 224 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 CLRN3Q8NCR9 226 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 GLMPQ8WWB7 406 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 TVP23CQ96ET8 276 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 ATG101Q9BSB4 218 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 AAMDCQ9H7C9 122 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 ZNF586Q9NXT0 402 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 EPDR1Q9UM22 224 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 KLF12Q9Y4X4 402 aa6.95□□□□□ -1.3
NR1I3-209ENST00000428574 TSSC4Q9Y5U2 329 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-209ENST00000428574 ACANP16112 2415 aa6.94□□□□□ -1.3
NR1I3-209ENST00000428574 IGHV7-4-1A0A0J9YVY3 117 aa6.94□□□□□ -1.3
NR1I3-209ENST00000428574 LINC01619G3V211 115 aa6.94□□□□□ -1.3
NR1I3-209ENST00000428574 K7EQM0 130 aa6.94□□□□□ -1.3
NR1I3-209ENST00000428574 PEX7O00628 323 aa6.94□□□□□ -1.3
NR1I3-209ENST00000428574 EIF3GO75821 320 aaKnown RBP eCLIP6.94□□□□□ -1.3
NR1I3-209ENST00000428574 NDUFB4O95168 129 aa6.94□□□□□ -1.3
NR1I3-209ENST00000428574 CNN1P51911 297 aaKnown RBP6.94□□□□□ -1.3
NR1I3-209ENST00000428574 PROK1P58294 105 aa6.94□□□□□ -1.3
NR1I3-209ENST00000428574 FHL3Q13643 280 aa6.94□□□□□ -1.3
NR1I3-209ENST00000428574 KLF5Q13887 457 aaPredicted RBP6.94□□□□□ -1.3
NR1I3-209ENST00000428574 LEMD1Q68G75 181 aa6.94□□□□□ -1.3
NR1I3-209ENST00000428574 C10orf99Q6UWK7 81 aa6.94□□□□□ -1.3
NR1I3-209ENST00000428574 SIGLEC15Q6ZMC9 328 aa6.94□□□□□ -1.3
NR1I3-209ENST00000428574 FMC1Q96HJ9 113 aa6.94□□□□□ -1.3
NR1I3-209ENST00000428574 C20orf24Q9BUV8 137 aa6.94□□□□□ -1.3
NR1I3-209ENST00000428574 Q9H3A6 140 aa6.94□□□□□ -1.3
NR1I3-209ENST00000428574 SDF2L1Q9HCN8 221 aa6.94□□□□□ -1.3
NR1I3-209ENST00000428574 TMEM242Q9NWH2 141 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms