RNA–Protein interactions for RNA: ENST00000428253.1

MMP11-202, Transcript of matrix metallopeptidase 11, humanhuman

TSL 4

Gene MMP11, Length 537 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-202ENST00000428253 RNF222A6NCQ9 220 aa13.23□□□□□ -0.29
MMP11-202ENST00000428253 MRPS12O15235 138 aaKnown RBP13.23□□□□□ -0.29
MMP11-202ENST00000428253 DEFB131AP59861 70 aa13.23□□□□□ -0.29
MMP11-202ENST00000428253 B2MP61769 119 aa13.23□□□□□ -0.29
MMP11-202ENST00000428253 MORN5Q5VZ52 161 aa13.23□□□□□ -0.29
MMP11-202ENST00000428253 TM2D3Q9BRN9 247 aa13.23□□□□□ -0.29
MMP11-202ENST00000428253 SLC25A22Q9H936 323 aa13.23□□□□□ -0.29
MMP11-202ENST00000428253 DNAJC4Q9NNZ3 241 aa13.23□□□□□ -0.29
MMP11-202ENST00000428253 Q6ZRG5 221 aa13.22□□□□□ -0.29
MMP11-202ENST00000428253 LINC00305Q7Z4B0 112 aa13.22□□□□□ -0.29
MMP11-202ENST00000428253 S100A7AQ86SG5 101 aa13.22□□□□□ -0.29
MMP11-202ENST00000428253 SMIM3Q9BZL3 60 aa13.22□□□□□ -0.29
MMP11-202ENST00000428253 TNFSF18Q9UNG2 199 aa13.22□□□□□ -0.29
MMP11-202ENST00000428253 HUWE1Q7Z6Z7 4374 aaKnown RBP13.22□□□□□ -0.29
MMP11-202ENST00000428253 COX7A2P2O60397 106 aa13.21□□□□□ -0.29
MMP11-202ENST00000428253 ZNF688P0C7X2 276 aa13.21□□□□□ -0.29
MMP11-202ENST00000428253 GALR1P47211 349 aa13.21□□□□□ -0.29
MMP11-202ENST00000428253 C10orf113Q5VZT2 155 aa13.21□□□□□ -0.29
MMP11-202ENST00000428253 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.21□□□□□ -0.29
MMP11-202ENST00000428253 LOC102724200A0A096LPH7 203 aaPredicted RBP13.2□□□□□ -0.3
MMP11-202ENST00000428253 RPL7P18124 248 aaKnown RBP13.2□□□□□ -0.3
MMP11-202ENST00000428253 OR1L4Q8NGR5 311 aa13.2□□□□□ -0.3
MMP11-202ENST00000428253 GATAD1Q8WUU5 269 aa13.2□□□□□ -0.3
MMP11-202ENST00000428253 PFDN5Q99471 154 aa13.2□□□□□ -0.3
MMP11-202ENST00000428253 RSG1Q9BU20 258 aa13.2□□□□□ -0.3
MMP11-202ENST00000428253 RNF24Q9Y225 148 aa13.2□□□□□ -0.3
MMP11-202ENST00000428253 AGRNO00468 2067 aa13.19□□□□□ -0.3
MMP11-202ENST00000428253 FXYD6-FXYD2A0A087WZ82 144 aa13.19□□□□□ -0.3
MMP11-202ENST00000428253 A0A087X0K7 114 aa13.19□□□□□ -0.3
MMP11-202ENST00000428253 MEOX2P50222 304 aa13.19□□□□□ -0.3
MMP11-202ENST00000428253 GCSAMLQ5JQS6 135 aa13.19□□□□□ -0.3
MMP11-202ENST00000428253 KIR2DL5BA0A0G2JN68 375 aa13.18□□□□□ -0.3
MMP11-202ENST00000428253 KIR2DL5BA0A0G2JPC4 375 aa13.18□□□□□ -0.3
MMP11-202ENST00000428253 ISLRO14498 428 aa13.18□□□□□ -0.3
MMP11-202ENST00000428253 IFNA5P01569 189 aa13.18□□□□□ -0.3
MMP11-202ENST00000428253 PSMB3P49720 205 aa13.18□□□□□ -0.3
MMP11-202ENST00000428253 SNRPD3P62318 126 aaKnown RBP13.18□□□□□ -0.3
MMP11-202ENST00000428253 PSMG4Q5JS54 123 aa13.18□□□□□ -0.3
MMP11-202ENST00000428253 KIR2DL5AQ8N109 375 aa13.18□□□□□ -0.3
MMP11-202ENST00000428253 KIR2DL5BQ8NHK3 375 aa13.18□□□□□ -0.3
MMP11-202ENST00000428253 KCNIP2Q9NS61 270 aa13.18□□□□□ -0.3
MMP11-202ENST00000428253 TRAV5A0A0B4J249 113 aa13.17□□□□□ -0.3
MMP11-202ENST00000428253 SMLR1H3BR10 107 aa13.17□□□□□ -0.3
MMP11-202ENST00000428253 SAMD13Q5VXD3 122 aa13.17□□□□□ -0.3
MMP11-202ENST00000428253 ZNF709Q8N972 641 aa13.17□□□□□ -0.3
MMP11-202ENST00000428253 INO80EQ8NBZ0 244 aaPredicted RBP13.17□□□□□ -0.3
MMP11-202ENST00000428253 RFNGQ9Y644 331 aa13.17□□□□□ -0.3
MMP11-202ENST00000428253 TENM3Q9P273 2699 aa13.16□□□□□ -0.3
MMP11-202ENST00000428253 TRAV8-2A0A0B4J237 113 aa13.16□□□□□ -0.3
MMP11-202ENST00000428253 C17orf112F2Z3M2 114 aa13.16□□□□□ -0.3
MMP11-202ENST00000428253 IGLC2P0DOY2 106 aa13.16□□□□□ -0.3
MMP11-202ENST00000428253 ID1P41134 155 aa13.16□□□□□ -0.3
MMP11-202ENST00000428253 TRPT1Q86TN4 253 aaKnown RBP13.16□□□□□ -0.3
MMP11-202ENST00000428253 BPIFA4PQ86YQ2 179 aa13.16□□□□□ -0.3
MMP11-202ENST00000428253 OR11H4Q8NGC9 324 aa13.16□□□□□ -0.3
MMP11-202ENST00000428253 SCGB1C1Q8TD33 95 aa13.16□□□□□ -0.3
MMP11-202ENST00000428253 ST6GAL2Q96JF0 529 aa13.16□□□□□ -0.3
MMP11-202ENST00000428253 C20orf173Q96LM9 149 aa13.16□□□□□ -0.3
MMP11-202ENST00000428253 KNCNA6PVL3 124 aa13.15□□□□□ -0.3
MMP11-202ENST00000428253 RPL35AP18077 110 aaKnown RBP13.15□□□□□ -0.3
MMP11-202ENST00000428253 ATF4P18848 351 aaPredicted RBP13.15□□□□□ -0.3
MMP11-202ENST00000428253 ZNF266Q14584 549 aa13.15□□□□□ -0.3
MMP11-202ENST00000428253 FAM167A-AS1Q96KT0 104 aa13.15□□□□□ -0.3
MMP11-202ENST00000428253 SPATA25Q9BR10 227 aa13.15□□□□□ -0.3
MMP11-202ENST00000428253 TIMM9Q9Y5J7 89 aa13.15□□□□□ -0.3
MMP11-202ENST00000428253 U3KQK5 164 aa13.15□□□□□ -0.3
MMP11-202ENST00000428253 APOC4P55056 127 aa13.14□□□□□ -0.31
MMP11-202ENST00000428253 SPATA31B1PQ5VZV4 182 aa13.14□□□□□ -0.31
MMP11-202ENST00000428253 C16orf92Q96LL3 132 aa13.14□□□□□ -0.31
MMP11-202ENST00000428253 ZMAT4Q9H898 229 aa13.14□□□□□ -0.31
MMP11-202ENST00000428253 TMEM14CQ9P0S9 112 aa13.14□□□□□ -0.31
MMP11-202ENST00000428253 NBEAL2Q6ZNJ1 2754 aa13.13□□□□□ -0.31
MMP11-202ENST00000428253 HMSDA8MTL9 139 aa13.13□□□□□ -0.31
MMP11-202ENST00000428253 H3BMM0 161 aa13.13□□□□□ -0.31
MMP11-202ENST00000428253 H3BQ15 152 aa13.13□□□□□ -0.31
MMP11-202ENST00000428253 UBE2CO00762 179 aa13.13□□□□□ -0.31
MMP11-202ENST00000428253 CXCL2P19875 107 aa13.13□□□□□ -0.31
MMP11-202ENST00000428253 FFAR4Q5NUL3 377 aa13.13□□□□□ -0.31
MMP11-202ENST00000428253 FAM78BQ5VT40 261 aa13.13□□□□□ -0.31
MMP11-202ENST00000428253 Q6ZWC4 215 aa13.13□□□□□ -0.31
MMP11-202ENST00000428253 SAT2Q96F10 170 aaPredicted RBP13.13□□□□□ -0.31
MMP11-202ENST00000428253 RCHY1Q96PM5 261 aa13.13□□□□□ -0.31
MMP11-202ENST00000428253 HRH4Q9H3N8 390 aa13.13□□□□□ -0.31
MMP11-202ENST00000428253 ARPC5O15511 151 aa13.12□□□□□ -0.31
MMP11-202ENST00000428253 GIG44P09565 113 aaPredicted RBP13.12□□□□□ -0.31
MMP11-202ENST00000428253 HLA-DRB4P13762 266 aa13.12□□□□□ -0.31
MMP11-202ENST00000428253 DEFB1P60022 68 aa13.12□□□□□ -0.31
MMP11-202ENST00000428253 ACTL10Q5JWF8 245 aa13.12□□□□□ -0.31
MMP11-202ENST00000428253 GDF5OSQ5U4N7 250 aa13.12□□□□□ -0.31
MMP11-202ENST00000428253 IGFL4Q6B9Z1 124 aa13.12□□□□□ -0.31
MMP11-202ENST00000428253 FOXI2Q6ZQN5 318 aa13.12□□□□□ -0.31
MMP11-202ENST00000428253 MIR17HGQ75NE6 70 aa13.12□□□□□ -0.31
MMP11-202ENST00000428253 STHQ8IWL8 128 aa13.12□□□□□ -0.31
MMP11-202ENST00000428253 LINC00052Q96N35 136 aa13.12□□□□□ -0.31
MMP11-202ENST00000428253 PSMG3Q9BT73 122 aaPredicted RBP13.12□□□□□ -0.31
MMP11-202ENST00000428253 SLC25A2Q9BXI2 301 aa13.12□□□□□ -0.31
MMP11-202ENST00000428253 MRPL32Q9BYC8 188 aaKnown RBP13.12□□□□□ -0.31
MMP11-202ENST00000428253 CSTL1Q9H114 145 aa13.12□□□□□ -0.31
MMP11-202ENST00000428253 SAV1Q9H4B6 383 aaPredicted RBP13.12□□□□□ -0.31
MMP11-202ENST00000428253 RETNQ9HD89 108 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms