RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 MED12LQ86YW9 2145 aa8.65□□□□□ -1.03
TCOF1-204ENST00000427724 MUC22E2RYF6 1773 aaPredicted RBP8.65□□□□□ -1.03
TCOF1-204ENST00000427724 BUB1B-PAK6H3BSN5 160 aa8.65□□□□□ -1.03
TCOF1-204ENST00000427724 LEPROTL1O95214 131 aa8.65□□□□□ -1.03
TCOF1-204ENST00000427724 SELENOTP62341 195 aa8.65□□□□□ -1.03
TCOF1-204ENST00000427724 FAM53AQ6NSI3 398 aaPredicted RBP8.65□□□□□ -1.03
TCOF1-204ENST00000427724 C19orf35Q6ZS72 473 aa8.65□□□□□ -1.03
TCOF1-204ENST00000427724 HSPB7Q9UBY9 170 aa8.65□□□□□ -1.03
TCOF1-204ENST00000427724 UBE2V1Q13404 147 aa8.64□□□□□ -1.03
TCOF1-204ENST00000427724 OR8A1Q8NGG7 326 aa8.64□□□□□ -1.03
TCOF1-204ENST00000427724 NABP2Q9BQ15 211 aa8.64□□□□□ -1.03
TCOF1-204ENST00000427724 A6NDN8 102 aa8.64□□□□□ -1.03
TCOF1-204ENST00000427724 AMY1AP04745 511 aa8.64□□□□□ -1.03
TCOF1-204ENST00000427724 IL6RP08887 468 aaPredicted RBP8.64□□□□□ -1.03
TCOF1-204ENST00000427724 CX3CL1P78423 397 aa8.64□□□□□ -1.03
TCOF1-204ENST00000427724 CENPWQ5EE01 88 aa8.64□□□□□ -1.03
TCOF1-204ENST00000427724 OCC1Q8TAD7 63 aa8.64□□□□□ -1.03
TCOF1-204ENST00000427724 DPH3Q96FX2 82 aa8.64□□□□□ -1.03
TCOF1-204ENST00000427724 MEGF9Q9H1U4 602 aa8.64□□□□□ -1.03
TCOF1-204ENST00000427724 TXNDC17Q9BRA2 123 aa8.64□□□□□ -1.03
TCOF1-204ENST00000427724 C22orf46C9J442 243 aa8.63□□□□□ -1.03
TCOF1-204ENST00000427724 ISLRO14498 428 aa8.63□□□□□ -1.03
TCOF1-204ENST00000427724 IGFBP2P18065 325 aa8.63□□□□□ -1.03
TCOF1-204ENST00000427724 RPL7P18124 248 aaKnown RBP8.63□□□□□ -1.03
TCOF1-204ENST00000427724 Q6ZS49 121 aa8.63□□□□□ -1.03
TCOF1-204ENST00000427724 LINC01551Q86U37 167 aa8.63□□□□□ -1.03
TCOF1-204ENST00000427724 OR4C46A6NHA9 309 aa8.63□□□□□ -1.03
TCOF1-204ENST00000427724 BTF3P20290 206 aaKnown RBP8.63□□□□□ -1.03
TCOF1-204ENST00000427724 PRR31Q5SQ13 230 aa8.63□□□□□ -1.03
TCOF1-204ENST00000427724 Q6P435 159 aa8.63□□□□□ -1.03
TCOF1-204ENST00000427724 STHQ8IWL8 128 aa8.63□□□□□ -1.03
TCOF1-204ENST00000427724 C5orf64Q2M2E5 130 aa8.63□□□□□ -1.03
TCOF1-204ENST00000427724 AMMECR1LQ6DCA0 310 aa8.63□□□□□ -1.03
TCOF1-204ENST00000427724 TMEM14EPQ6UXP3 125 aa8.63□□□□□ -1.03
TCOF1-204ENST00000427724 PMCHL2Q9BQD1 86 aa8.63□□□□□ -1.03
TCOF1-204ENST00000427724 PGPA6NDG6 321 aa8.63□□□□□ -1.03
TCOF1-204ENST00000427724 KCNS1Q96KK3 526 aa8.63□□□□□ -1.03
TCOF1-204ENST00000427724 RNASE7Q9H1E1 156 aaKnown RBP8.63□□□□□ -1.03
TCOF1-204ENST00000427724 ATRQ13535 2644 aa8.63□□□□□ -1.03
TCOF1-204ENST00000427724 EML5Q05BV3 1969 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 CENPEQ02224 2701 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 IGKV1-39P01597 117 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 IGKV1D-39P04432 117 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 LOXP28300 417 aaPredicted RBP8.62□□□□□ -1.03
TCOF1-204ENST00000427724 PRSS8Q16651 343 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 C15orf32Q32M92 178 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 RNF138Q8WVD3 245 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 ZNF324O75467 553 aaPredicted RBP8.62□□□□□ -1.03
TCOF1-204ENST00000427724 DUTP33316 252 aaKnown RBP8.62□□□□□ -1.03
TCOF1-204ENST00000427724 MAS1LP35410 378 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 NMUP48645 174 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 CD69Q07108 199 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 ZNF841Q6ZN19 808 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 COQ2Q96H96 371 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 C20orf144Q9BQM9 153 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 P01737 135 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 ZNF726P1Q15940 193 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 TDRG1Q3Y452 100 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 TMEM70Q9BUB7 260 aa8.62□□□□□ -1.03
TCOF1-204ENST00000427724 PEF1Q9UBV8 284 aaKnown RBP8.62□□□□□ -1.03
TCOF1-204ENST00000427724 YTHDF2Q9Y5A9 579 aaKnown RBP8.62□□□□□ -1.03
TCOF1-204ENST00000427724 C8orf88P0DMB2 117 aa8.61□□□□□ -1.03
TCOF1-204ENST00000427724 IGHV4-38-2P0DP08 117 aa8.61□□□□□ -1.03
TCOF1-204ENST00000427724 GAGE1Q13065 139 aa8.61□□□□□ -1.03
TCOF1-204ENST00000427724 Q6ZWC4 215 aa8.61□□□□□ -1.03
TCOF1-204ENST00000427724 STPG4Q8N801 248 aa8.61□□□□□ -1.03
TCOF1-204ENST00000427724 WDR83OSQ9Y284 106 aa8.61□□□□□ -1.03
TCOF1-204ENST00000427724 LINC00473A8K010 186 aa8.61□□□□□ -1.03
TCOF1-204ENST00000427724 GPX1P07203 203 aa8.61□□□□□ -1.03
TCOF1-204ENST00000427724 PSG1P11464 419 aa8.61□□□□□ -1.03
TCOF1-204ENST00000427724 RPL35AP18077 110 aaKnown RBP8.61□□□□□ -1.03
TCOF1-204ENST00000427724 ZFP36P26651 326 aaKnown RBP8.61□□□□□ -1.03
TCOF1-204ENST00000427724 MIR17HGQ75NE6 70 aa8.61□□□□□ -1.03
TCOF1-204ENST00000427724 NUDT10Q8NFP7 164 aa8.61□□□□□ -1.03
TCOF1-204ENST00000427724 NAA38Q9BRA0 125 aaKnown RBP8.61□□□□□ -1.03
TCOF1-204ENST00000427724 SYNJ2BPP57105 145 aa8.61□□□□□ -1.03
TCOF1-204ENST00000427724 TMEM177Q53S58 311 aa8.61□□□□□ -1.03
TCOF1-204ENST00000427724 RNASE8Q8TDE3 154 aaKnown RBP8.61□□□□□ -1.03
TCOF1-204ENST00000427724 EML6Q6ZMW3 1958 aa8.61□□□□□ -1.03
TCOF1-204ENST00000427724 TRBV9A0A0B4J1U6 114 aa8.6□□□□□ -1.03
TCOF1-204ENST00000427724 C3orf79P0CE67 100 aa8.6□□□□□ -1.03
TCOF1-204ENST00000427724 PRNTQ86SH4 94 aa8.6□□□□□ -1.03
TCOF1-204ENST00000427724 TRBV6-6A0A0A6YYG2 114 aa8.6□□□□□ -1.03
TCOF1-204ENST00000427724 TSPOP30536 169 aa8.6□□□□□ -1.03
TCOF1-204ENST00000427724 MPV17L2Q567V2 206 aa8.6□□□□□ -1.03
TCOF1-204ENST00000427724 FNDC4Q9H6D8 234 aaPredicted RBP8.6□□□□□ -1.03
TCOF1-204ENST00000427724 ASPMQ8IZT6 3477 aa8.6□□□□□ -1.03
TCOF1-204ENST00000427724 CA1P00915 261 aaPredicted RBP8.6□□□□□ -1.03
TCOF1-204ENST00000427724 PAX8Q06710 450 aa8.6□□□□□ -1.03
TCOF1-204ENST00000427724 TEX45Q8NA69 505 aa8.6□□□□□ -1.03
TCOF1-204ENST00000427724 ORAOV1Q8WV07 137 aa8.6□□□□□ -1.03
TCOF1-204ENST00000427724 SSBP4Q9BWG4 385 aaPredicted RBP8.6□□□□□ -1.03
TCOF1-204ENST00000427724 FGF23Q9GZV9 251 aaPredicted RBP8.6□□□□□ -1.03
TCOF1-204ENST00000427724 MGAM2Q2M2H8 2515 aa8.6□□□□□ -1.03
TCOF1-204ENST00000427724 TRAV9-2A0A087WT02 112 aa8.6□□□□□ -1.03
TCOF1-204ENST00000427724 GLMPQ8WWB7 406 aa8.6□□□□□ -1.03
TCOF1-204ENST00000427724 HSPB8Q9UJY1 196 aa8.6□□□□□ -1.03
TCOF1-204ENST00000427724 TRAV3A0A0B4J244 114 aa8.59□□□□□ -1.03
TCOF1-204ENST00000427724 TREML4Q6UXN2 200 aa8.59□□□□□ -1.03
TCOF1-204ENST00000427724 HAPLN4Q86UW8 402 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms