RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 TOMM20LQ6UXN7 152 aa13.85□□□□□ -0.19
AC055811.2-201ENST00000427497 RPUSD4Q96CM3 377 aaKnown RBP13.85□□□□□ -0.19
AC055811.2-201ENST00000427497 TVP23CQ96ET8 276 aa13.85□□□□□ -0.19
AC055811.2-201ENST00000427497 DUX5Q96PT3 197 aa13.85□□□□□ -0.19
AC055811.2-201ENST00000427497 SMIM7Q9BQ49 75 aa13.85□□□□□ -0.19
AC055811.2-201ENST00000427497 A0A0G2JLM5 398 aa13.85□□□□□ -0.19
AC055811.2-201ENST00000427497 ZNF98A6NK75 572 aa13.85□□□□□ -0.19
AC055811.2-201ENST00000427497 ZNF329Q86UD4 541 aa13.85□□□□□ -0.19
AC055811.2-201ENST00000427497 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.84□□□□□ -0.19
AC055811.2-201ENST00000427497 SCO2A0A1W2PP80 73 aa13.84□□□□□ -0.19
AC055811.2-201ENST00000427497 DNAJC9-AS1A6NH13 148 aa13.84□□□□□ -0.19
AC055811.2-201ENST00000427497 M0R036 132 aa13.84□□□□□ -0.19
AC055811.2-201ENST00000427497 NBEAP1P0C6P0 100 aa13.84□□□□□ -0.19
AC055811.2-201ENST00000427497 RELQ04864 619 aaPredicted RBP13.84□□□□□ -0.19
AC055811.2-201ENST00000427497 BTN1A1Q13410 526 aa13.84□□□□□ -0.19
AC055811.2-201ENST00000427497 SDF2L1Q9HCN8 221 aa13.84□□□□□ -0.19
AC055811.2-201ENST00000427497 C7orf77A4D0Y5 90 aa13.83□□□□□ -0.2
AC055811.2-201ENST00000427497 BMPR1BO00238 502 aa13.83□□□□□ -0.2
AC055811.2-201ENST00000427497 MRPS12O15235 138 aaKnown RBP13.83□□□□□ -0.2
AC055811.2-201ENST00000427497 NDUFB4O95168 129 aa13.83□□□□□ -0.2
AC055811.2-201ENST00000427497 MYCNOSP40205 109 aa13.83□□□□□ -0.2
AC055811.2-201ENST00000427497 RHEBQ15382 184 aa13.83□□□□□ -0.2
AC055811.2-201ENST00000427497 LCNL1Q6ZST4 164 aa13.83□□□□□ -0.2
AC055811.2-201ENST00000427497 C20orf24Q9BUV8 137 aa13.83□□□□□ -0.2
AC055811.2-201ENST00000427497 GNB4Q9HAV0 340 aa13.83□□□□□ -0.2
AC055811.2-201ENST00000427497 RABAC1Q9UI14 185 aa13.83□□□□□ -0.2
AC055811.2-201ENST00000427497 IGHV3-35A0A0C4DH35 117 aa13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 PPP5D1E7EU14 171 aa13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 DNASE2O00115 360 aaPredicted RBP13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 HIST1H1EP10412 219 aaKnown RBP13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 SUMO1P63165 101 aaKnown RBP13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 PNRC1Q12796 327 aaPredicted RBP13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 ZNF674Q2M3X9 581 aa13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 BPIFA4PQ86YQ2 179 aa13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 C3orf56Q8N813 242 aa13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 NAT8Q9UHE5 227 aa13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 ARL3P36405 182 aa13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 TMEM241Q24JQ0 296 aa13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 C10orf99Q6UWK7 81 aa13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 DERL1Q9BUN8 251 aa13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 ELOVL1Q9BW60 279 aa13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 SERTAD4Q9NUC0 356 aa13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 RNF24Q9Y225 148 aa13.82□□□□□ -0.2
AC055811.2-201ENST00000427497 CLPSL1A2RUU4 121 aa13.81□□□□□ -0.2
AC055811.2-201ENST00000427497 CLDN34H7C241 214 aa13.81□□□□□ -0.2
AC055811.2-201ENST00000427497 TRBV12-3P01733 135 aa13.81□□□□□ -0.2
AC055811.2-201ENST00000427497 IGLC2P0DOY2 106 aa13.81□□□□□ -0.2
AC055811.2-201ENST00000427497 SLC35B1P78383 322 aa13.81□□□□□ -0.2
AC055811.2-201ENST00000427497 OR4X2Q8NGF9 303 aa13.81□□□□□ -0.2
AC055811.2-201ENST00000427497 ZNF586Q9NXT0 402 aa13.81□□□□□ -0.2
AC055811.2-201ENST00000427497 IGHV3-11P01762 117 aa13.8□□□□□ -0.2
AC055811.2-201ENST00000427497 ELANEP08246 267 aa13.8□□□□□ -0.2
AC055811.2-201ENST00000427497 SNRPCP09234 159 aaKnown RBP13.8□□□□□ -0.2
AC055811.2-201ENST00000427497 S100A7P31151 101 aa13.8□□□□□ -0.2
AC055811.2-201ENST00000427497 FOXE3Q13461 319 aa13.8□□□□□ -0.2
AC055811.2-201ENST00000427497 TEX38Q6PEX7 206 aa13.8□□□□□ -0.2
AC055811.2-201ENST00000427497 RNF152Q8N8N0 203 aa13.8□□□□□ -0.2
AC055811.2-201ENST00000427497 MYOZ3Q8TDC0 251 aa13.8□□□□□ -0.2
AC055811.2-201ENST00000427497 BLNKQ8WV28 456 aa13.8□□□□□ -0.2
AC055811.2-201ENST00000427497 RPS10P5Q9NQ39 176 aa13.8□□□□□ -0.2
AC055811.2-201ENST00000427497 CRYBB3P26998 211 aa13.79□□□□□ -0.2
AC055811.2-201ENST00000427497 RANP62826 216 aaKnown RBP13.79□□□□□ -0.2
AC055811.2-201ENST00000427497 FAM209BQ5JX69 171 aa13.79□□□□□ -0.2
AC055811.2-201ENST00000427497 OR4F17Q8NGA8 305 aa13.79□□□□□ -0.2
AC055811.2-201ENST00000427497 C2CD4CQ8TF44 421 aa13.79□□□□□ -0.2
AC055811.2-201ENST00000427497 TCEAL7Q9BRU2 100 aa13.79□□□□□ -0.2
AC055811.2-201ENST00000427497 IGHV3OR16-8A0A075B7F1 116 aa13.79□□□□□ -0.2
AC055811.2-201ENST00000427497 FAM181BA6NEQ2 426 aa13.79□□□□□ -0.2
AC055811.2-201ENST00000427497 B4DEV8 164 aa13.79□□□□□ -0.2
AC055811.2-201ENST00000427497 RNASE1P07998 156 aaKnown RBP13.79□□□□□ -0.2
AC055811.2-201ENST00000427497 FOXL1Q12952 345 aa13.79□□□□□ -0.2
AC055811.2-201ENST00000427497 TMEM88Q6PEY1 159 aa13.79□□□□□ -0.2
AC055811.2-201ENST00000427497 CBLN2Q8IUK8 224 aa13.79□□□□□ -0.2
AC055811.2-201ENST00000427497 TRBV20OR9-2A0A075B6H5 130 aa13.78□□□□□ -0.2
AC055811.2-201ENST00000427497 TRBV19A0A075B6N1 114 aa13.78□□□□□ -0.2
AC055811.2-201ENST00000427497 A0A087WWC5 75 aa13.78□□□□□ -0.2
AC055811.2-201ENST00000427497 NDUFA4O00483 81 aa13.78□□□□□ -0.2
AC055811.2-201ENST00000427497 AKR1C3P42330 323 aa13.78□□□□□ -0.2
AC055811.2-201ENST00000427497 RPL23P62829 140 aaKnown RBP13.78□□□□□ -0.2
AC055811.2-201ENST00000427497 U3KQE9 123 aa13.78□□□□□ -0.2
AC055811.2-201ENST00000427497 H3BTX0 84 aa13.77□□□□□ -0.21
AC055811.2-201ENST00000427497 BUB3O43684 328 aa13.77□□□□□ -0.21
AC055811.2-201ENST00000427497 RPL7P18124 248 aaKnown RBP13.77□□□□□ -0.21
AC055811.2-201ENST00000427497 Q6ZSV7 163 aa13.77□□□□□ -0.21
AC055811.2-201ENST00000427497 Q9H3A6 140 aa13.77□□□□□ -0.21
AC055811.2-201ENST00000427497 C9JCJ5 164 aa13.76□□□□□ -0.21
AC055811.2-201ENST00000427497 RPLP1P05386 114 aaKnown RBP13.76□□□□□ -0.21
AC055811.2-201ENST00000427497 RPL35P42766 123 aaKnown RBP13.76□□□□□ -0.21
AC055811.2-201ENST00000427497 RPL15P61313 204 aaKnown RBP13.76□□□□□ -0.21
AC055811.2-201ENST00000427497 TMEM190Q8WZ59 177 aa13.76□□□□□ -0.21
AC055811.2-201ENST00000427497 METTL26Q96S19 204 aa13.76□□□□□ -0.21
AC055811.2-201ENST00000427497 OTORQ9NRC9 128 aa13.76□□□□□ -0.21
AC055811.2-201ENST00000427497 PEF1Q9UBV8 284 aaKnown RBP13.76□□□□□ -0.21
AC055811.2-201ENST00000427497 PGPA6NDG6 321 aa13.75□□□□□ -0.21
AC055811.2-201ENST00000427497 GGCTO75223 188 aaKnown RBP13.75□□□□□ -0.21
AC055811.2-201ENST00000427497 PDE6HQ13956 83 aa13.75□□□□□ -0.21
AC055811.2-201ENST00000427497 ADIRFQ15847 76 aa13.75□□□□□ -0.21
AC055811.2-201ENST00000427497 LYPD1Q8N2G4 141 aa13.75□□□□□ -0.21
AC055811.2-201ENST00000427497 HIST1H2BAQ96A08 127 aa13.75□□□□□ -0.21
AC055811.2-201ENST00000427497 C17orf77Q96MU5 243 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms