RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 ATP5SQ99766 215 aa18.61■□□□□ 0.57
HERPUD2-205ENST00000427455 NPCDR1Q9BY65 106 aa18.61■□□□□ 0.57
HERPUD2-205ENST00000427455 TENM3Q9P273 2699 aa18.6■□□□□ 0.57
HERPUD2-205ENST00000427455 ELOA3CA0A087WX78 387 aaPredicted RBP18.6■□□□□ 0.57
HERPUD2-205ENST00000427455 APOC4P55056 127 aa18.6■□□□□ 0.57
HERPUD2-205ENST00000427455 SAMD13Q5VXD3 122 aa18.6■□□□□ 0.57
HERPUD2-205ENST00000427455 RPL7P18124 248 aaKnown RBP18.59■□□□□ 0.57
HERPUD2-205ENST00000427455 MEOX2P50222 304 aa18.59■□□□□ 0.57
HERPUD2-205ENST00000427455 B2MP61769 119 aa18.59■□□□□ 0.57
HERPUD2-205ENST00000427455 PSMG4Q5JS54 123 aa18.59■□□□□ 0.57
HERPUD2-205ENST00000427455 LINC00305Q7Z4B0 112 aa18.59■□□□□ 0.57
HERPUD2-205ENST00000427455 RCHY1Q96PM5 261 aa18.59■□□□□ 0.57
HERPUD2-205ENST00000427455 SLC39A9Q9NUM3 307 aa18.59■□□□□ 0.57
HERPUD2-205ENST00000427455 PXMP4Q9Y6I8 212 aa18.59■□□□□ 0.57
HERPUD2-205ENST00000427455 C10orf113Q5VZT2 155 aa18.58■□□□□ 0.56
HERPUD2-205ENST00000427455 OR1L4Q8NGR5 311 aa18.58■□□□□ 0.56
HERPUD2-205ENST00000427455 TMEM37Q8WXS4 190 aa18.58■□□□□ 0.56
HERPUD2-205ENST00000427455 PFDN5Q99471 154 aa18.58■□□□□ 0.56
HERPUD2-205ENST00000427455 WDR61Q9GZS3 305 aaKnown RBP18.58■□□□□ 0.56
HERPUD2-205ENST00000427455 NBEAL2Q6ZNJ1 2754 aa18.57■□□□□ 0.56
HERPUD2-205ENST00000427455 KIR2DL5BA0A0G2JN68 375 aa18.57■□□□□ 0.56
HERPUD2-205ENST00000427455 KIR2DL5BA0A0G2JPC4 375 aa18.57■□□□□ 0.56
HERPUD2-205ENST00000427455 SOCS3O14543 225 aa18.57■□□□□ 0.56
HERPUD2-205ENST00000427455 RPL35AP18077 110 aaKnown RBP18.57■□□□□ 0.56
HERPUD2-205ENST00000427455 ID1P41134 155 aa18.57■□□□□ 0.56
HERPUD2-205ENST00000427455 PSMB3P49720 205 aa18.57■□□□□ 0.56
HERPUD2-205ENST00000427455 KIR2DL5AQ8N109 375 aa18.57■□□□□ 0.56
HERPUD2-205ENST00000427455 KIR2DL5BQ8NHK3 375 aa18.57■□□□□ 0.56
HERPUD2-205ENST00000427455 RSG1Q9BU20 258 aa18.57■□□□□ 0.56
HERPUD2-205ENST00000427455 DNAJC4Q9NNZ3 241 aa18.57■□□□□ 0.56
HERPUD2-205ENST00000427455 KCNIP2Q9NS61 270 aa18.57■□□□□ 0.56
HERPUD2-205ENST00000427455 SMIM3Q9BZL3 60 aa18.56■□□□□ 0.56
HERPUD2-205ENST00000427455 ISLRO14498 428 aa18.55■□□□□ 0.56
HERPUD2-205ENST00000427455 ATF4P18848 351 aaPredicted RBP18.55■□□□□ 0.56
HERPUD2-205ENST00000427455 Q5BKY6 102 aa18.55■□□□□ 0.56
HERPUD2-205ENST00000427455 STHQ8IWL8 128 aa18.55■□□□□ 0.56
HERPUD2-205ENST00000427455 ZNF709Q8N972 641 aa18.55■□□□□ 0.56
HERPUD2-205ENST00000427455 OR2T35Q8NGX2 323 aa18.55■□□□□ 0.56
HERPUD2-205ENST00000427455 UBE2CO00762 179 aa18.54■□□□□ 0.56
HERPUD2-205ENST00000427455 IFNA5P01569 189 aa18.54■□□□□ 0.56
HERPUD2-205ENST00000427455 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.54■□□□□ 0.56
HERPUD2-205ENST00000427455 C17orf77Q96MU5 243 aa18.54■□□□□ 0.56
HERPUD2-205ENST00000427455 AQP10Q96PS8 301 aa18.54■□□□□ 0.56
HERPUD2-205ENST00000427455 C17orf112F2Z3M2 114 aa18.53■□□□□ 0.56
HERPUD2-205ENST00000427455 GATAD1Q8WUU5 269 aa18.53■□□□□ 0.56
HERPUD2-205ENST00000427455 C16orf92Q96LL3 132 aa18.53■□□□□ 0.56
HERPUD2-205ENST00000427455 RETNQ9HD89 108 aa18.53■□□□□ 0.56
HERPUD2-205ENST00000427455 KNCNA6PVL3 124 aa18.52■□□□□ 0.56
HERPUD2-205ENST00000427455 ACTL10Q5JWF8 245 aa18.52■□□□□ 0.56
HERPUD2-205ENST00000427455 LINC00052Q96N35 136 aa18.52■□□□□ 0.56
HERPUD2-205ENST00000427455 PARD6GQ9BYG4 376 aaPredicted RBP18.52■□□□□ 0.56
HERPUD2-205ENST00000427455 A0A087X0K7 114 aa18.51■□□□□ 0.55
HERPUD2-205ENST00000427455 MRPS12O15235 138 aaKnown RBP18.51■□□□□ 0.55
HERPUD2-205ENST00000427455 MORN5Q5VZ52 161 aa18.51■□□□□ 0.55
HERPUD2-205ENST00000427455 Q6ZWC4 215 aa18.51■□□□□ 0.55
HERPUD2-205ENST00000427455 TRPT1Q86TN4 253 aaKnown RBP18.51■□□□□ 0.55
HERPUD2-205ENST00000427455 BPIFA4PQ86YQ2 179 aa18.51■□□□□ 0.55
HERPUD2-205ENST00000427455 SCGB1C1Q8TD33 95 aa18.51■□□□□ 0.55
HERPUD2-205ENST00000427455 CSTL1Q9H114 145 aa18.51■□□□□ 0.55
HERPUD2-205ENST00000427455 INO80EQ8NBZ0 244 aaPredicted RBP18.5■□□□□ 0.55
HERPUD2-205ENST00000427455 WFDC1Q9HC57 220 aa18.5■□□□□ 0.55
HERPUD2-205ENST00000427455 FXYD6-FXYD2A0A087WZ82 144 aa18.49■□□□□ 0.55
HERPUD2-205ENST00000427455 TP53TG1Q9Y2A0 90 aa18.49■□□□□ 0.55
HERPUD2-205ENST00000427455 G3V3Q6 166 aa18.48■□□□□ 0.55
HERPUD2-205ENST00000427455 DEFB135Q30KP9 77 aa18.48■□□□□ 0.55
HERPUD2-205ENST00000427455 GCSAMLQ5JQS6 135 aa18.48■□□□□ 0.55
HERPUD2-205ENST00000427455 WWC2-AS2Q96NR7 200 aa18.48■□□□□ 0.55
HERPUD2-205ENST00000427455 TNFSF18Q9UNG2 199 aa18.48■□□□□ 0.55
HERPUD2-205ENST00000427455 HLA-DRB4P13762 266 aa18.47■□□□□ 0.55
HERPUD2-205ENST00000427455 CXCL2P19875 107 aa18.47■□□□□ 0.55
HERPUD2-205ENST00000427455 ZNF266Q14584 549 aa18.47■□□□□ 0.55
HERPUD2-205ENST00000427455 FOXI2Q6ZQN5 318 aa18.47■□□□□ 0.55
HERPUD2-205ENST00000427455 OVOL2Q9BRP0 275 aa18.47■□□□□ 0.55
HERPUD2-205ENST00000427455 RPRMQ9NS64 109 aa18.47■□□□□ 0.55
HERPUD2-205ENST00000427455 HLA-DRB4X5D2U9 266 aa18.47■□□□□ 0.55
HERPUD2-205ENST00000427455 AGRNO00468 2067 aa18.46■□□□□ 0.55
HERPUD2-205ENST00000427455 TRAV5A0A0B4J249 113 aa18.46■□□□□ 0.55
HERPUD2-205ENST00000427455 RNF222A6NCQ9 220 aa18.46■□□□□ 0.55
HERPUD2-205ENST00000427455 CA1P00915 261 aaPredicted RBP18.46■□□□□ 0.55
HERPUD2-205ENST00000427455 SPP1P10451 314 aa18.46■□□□□ 0.55
HERPUD2-205ENST00000427455 FAM78BQ5VT40 261 aa18.46■□□□□ 0.55
HERPUD2-205ENST00000427455 MORN3Q6PF18 240 aaPredicted RBP18.46■□□□□ 0.55
HERPUD2-205ENST00000427455 LCN15Q6UWW0 184 aa18.46■□□□□ 0.55
HERPUD2-205ENST00000427455 C20orf173Q96LM9 149 aa18.46■□□□□ 0.55
HERPUD2-205ENST00000427455 SAV1Q9H4B6 383 aaPredicted RBP18.46■□□□□ 0.55
HERPUD2-205ENST00000427455 TRAV8-2A0A0B4J237 113 aa18.45■□□□□ 0.54
HERPUD2-205ENST00000427455 H3BMM0 161 aa18.45■□□□□ 0.54
HERPUD2-205ENST00000427455 IGLC2P0DOY2 106 aa18.45■□□□□ 0.54
HERPUD2-205ENST00000427455 LRRC20Q8TCA0 184 aa18.45■□□□□ 0.54
HERPUD2-205ENST00000427455 HRH4Q9H3N8 390 aa18.45■□□□□ 0.54
HERPUD2-205ENST00000427455 SPRY2O43597 315 aa18.44■□□□□ 0.54
HERPUD2-205ENST00000427455 FFAR4Q5NUL3 377 aa18.44■□□□□ 0.54
HERPUD2-205ENST00000427455 GDF5OSQ5U4N7 250 aa18.44■□□□□ 0.54
HERPUD2-205ENST00000427455 SPATA31B1PQ5VZV4 182 aa18.44■□□□□ 0.54
HERPUD2-205ENST00000427455 RNF183Q96D59 192 aa18.44■□□□□ 0.54
HERPUD2-205ENST00000427455 MRPL32Q9BYC8 188 aaKnown RBP18.44■□□□□ 0.54
HERPUD2-205ENST00000427455 DEFB1P60022 68 aa18.43■□□□□ 0.54
HERPUD2-205ENST00000427455 TMEM41BQ5BJD5 291 aa18.43■□□□□ 0.54
HERPUD2-205ENST00000427455 EBLN2Q6P2I7 272 aa18.43■□□□□ 0.54
HERPUD2-205ENST00000427455 RNF182Q8N6D2 247 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms