RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 C10orf91Q5T1B1 145 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 FAM27BQ5VT28 67 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 TMEM42Q69YG0 159 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 DRAM2Q6UX65 266 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 Q6ZS49 121 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 TMPPEQ6ZT21 453 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 LYG2Q86SG7 212 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 COMMD7Q86VX2 200 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 RPS19BP1Q86WX3 136 aaKnown RBP1.15□□□□□ -2.23
PTPRC-208ENST00000427110 ANGPTL5Q86XS5 388 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 PDZD9Q8IXQ8 264 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 DEFB119Q8N690 84 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 SPERTQ8NA61 448 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 SLC30A7Q8NEW0 376 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 PXT1Q8NFP0 134 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 OR8B12Q8NGG6 310 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 OR51A2Q8NGJ7 313 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 TERB2Q8NHR7 220 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 LHFPL5Q8TAF8 219 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 STOML3Q8TAV4 291 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 MUC7Q8TAX7 377 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 SUN5Q8TC36 379 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 PP6455Q8WZ26 134 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 OR5P3Q8WZ94 311 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 UBE2WQ96B02 151 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 MRPS24Q96EL2 167 aaKnown RBP1.15□□□□□ -2.23
PTPRC-208ENST00000427110 ADAT3Q96EY9 351 aaPredicted RBP1.15□□□□□ -2.23
PTPRC-208ENST00000427110 PHB2Q99623 299 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 GINS4Q9BRT9 223 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 HIGD2AQ9BW72 106 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 ULBP3Q9BZM4 244 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 LINC00470Q9BZP3 86 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 NMES1Q9C002 83 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 CHST5Q9GZS9 411 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 CHST6Q9GZX3 395 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 CST11Q9H112 138 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 LPAR5Q9H1C0 372 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 FBXL15Q9H469 300 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 RNF122Q9H9V4 155 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 GPR84Q9NQS5 396 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 KCNIP2Q9NS61 270 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 MED29Q9NX70 200 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 RASL12Q9NYN1 266 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 TAS2R4Q9NYW5 299 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 COMMD9Q9P000 198 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 ATPIF1Q9UII2 106 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 TNFSF18Q9UNG2 199 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 U3KQK5 164 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 INTS1Q8N201 2190 aaKnown RBP1.15□□□□□ -2.23
PTPRC-208ENST00000427110 CUL9Q8IWT3 2517 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 NCOR1O75376 2440 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 USF3Q68DE3 2245 aa1.15□□□□□ -2.23
PTPRC-208ENST00000427110 DIDO1Q9BTC0 2240 aaKnown RBP1.15□□□□□ -2.23
PTPRC-208ENST00000427110 CACNA1DQ01668 2161 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 WDFY3Q8IZQ1 3526 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 DOCK11Q5JSL3 2073 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 VCANP13611 3396 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 FXYD6-FXYD2A0A087WZ82 144 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 A0A0J9YW62 118 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 KANTRA0A1W2PQU2 76 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 MEIS3P1A6NDR6 274 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 OR6C6A6NF89 314 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 TMEM235A6NFC5 223 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 CRYM-AS1A6NIL9 109 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 C9J4A7 227 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 I3L521 148 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 M0R135 149 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 RER1O15258 196 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 ARPC5O15511 151 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 SGCEO43556 437 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 OR2J2O76002 312 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 SIX6O95475 246 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 IFNA6P05013 189 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 CTSDP07339 412 aaPredicted RBP1.14□□□□□ -2.23
PTPRC-208ENST00000427110 CCL3P10147 92 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 COX5BP10606 129 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 LGALS3P17931 250 aaKnown RBP1.14□□□□□ -2.23
PTPRC-208ENST00000427110 PSMB6P28072 239 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 GUCA1AP43080 201 aaPredicted RBP1.14□□□□□ -2.23
PTPRC-208ENST00000427110 KCNJ3P48549 501 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 EIF5AP63241 154 aaKnown RBP1.14□□□□□ -2.23
PTPRC-208ENST00000427110 SUPT4H1P63272 117 aaKnown RBP1.14□□□□□ -2.23
PTPRC-208ENST00000427110 FAM3AP98173 230 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 BAXQ07812 192 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 PPP1R1AQ13522 171 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 OR8B8Q15620 311 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 TMEM176BQ3YBM2 270 aaPredicted RBP1.14□□□□□ -2.23
PTPRC-208ENST00000427110 AADACL3Q5VUY0 350 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 ELP2Q6IA86 826 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 OR10K2Q6IF99 312 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 GLIPR1L1Q6UWM5 242 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 ALKAL2Q6UX46 152 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 LYZL2Q7Z4W2 148 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 TRAPPC6BQ86SZ2 158 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 BAP18Q8IXM2 172 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 C20orf196Q8IYI0 205 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 C3orf22Q8N5N4 141 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 ZNF283Q8N7M2 679 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 ZIC4Q8N9L1 334 aa1.14□□□□□ -2.23
PTPRC-208ENST00000427110 ACBD4Q8NC06 268 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms