RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 ZFAND3Q9H8U3 227 aa11.17□□□□□ -0.62
CDK3-201ENST00000425876 TEP1Q99973 2627 aaKnown RBP11.17□□□□□ -0.62
CDK3-201ENST00000425876 MXRA5Q9NR99 2828 aa11.17□□□□□ -0.62
CDK3-201ENST00000425876 F8P00451 2351 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 HOXA3O43365 443 aaPredicted RBP11.16□□□□□ -0.62
CDK3-201ENST00000425876 CD5LO43866 347 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 LYPD1Q8N2G4 141 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 BLNKQ8WV28 456 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 ISOC2Q96AB3 205 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 OTORQ9NRC9 128 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 ZNF586Q9NXT0 402 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 TRBV19A0A075B6N1 114 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.16□□□□□ -0.62
CDK3-201ENST00000425876 PGPA6NDG6 321 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 PEX7O00628 323 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 IGHG4P01861 327 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 RPL7P18124 248 aaKnown RBP11.16□□□□□ -0.62
CDK3-201ENST00000425876 KRTAP1-1Q07627 177 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 PDE6HQ13956 83 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 FAM209BQ5JX69 171 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 C5orf17Q8NAS9 161 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 OCC1Q8TAD7 63 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 NPFFR1Q9GZQ6 430 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 Q9H3A6 140 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 CDC42EP3Q9UKI2 254 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 EPDR1Q9UM22 224 aa11.16□□□□□ -0.62
CDK3-201ENST00000425876 ZFHX3Q15911 3703 aa11.15□□□□□ -0.62
CDK3-201ENST00000425876 FLNAP21333 2647 aaKnown RBP11.15□□□□□ -0.62
CDK3-201ENST00000425876 PPP1R2P9O14990 202 aa11.15□□□□□ -0.62
CDK3-201ENST00000425876 PF4V1P10720 104 aa11.15□□□□□ -0.62
CDK3-201ENST00000425876 FOLR2P14207 255 aa11.15□□□□□ -0.62
CDK3-201ENST00000425876 CNN1P51911 297 aaKnown RBP11.15□□□□□ -0.62
CDK3-201ENST00000425876 FAM24BQ8N5W8 94 aa11.15□□□□□ -0.62
CDK3-201ENST00000425876 H7BYZ3 331 aa11.14□□□□□ -0.63
CDK3-201ENST00000425876 SLC25A5P05141 298 aaKnown RBP11.14□□□□□ -0.63
CDK3-201ENST00000425876 S100A9P06702 114 aaKnown RBP11.14□□□□□ -0.63
CDK3-201ENST00000425876 GNG4P50150 75 aa11.14□□□□□ -0.63
CDK3-201ENST00000425876 ELOBQ15370 118 aa11.14□□□□□ -0.63
CDK3-201ENST00000425876 CENPWQ5EE01 88 aa11.14□□□□□ -0.63
CDK3-201ENST00000425876 SIGLECL1Q8N7X8 197 aa11.14□□□□□ -0.63
CDK3-201ENST00000425876 KLK15Q9H2R5 256 aa11.14□□□□□ -0.63
CDK3-201ENST00000425876 GNB4Q9HAV0 340 aa11.14□□□□□ -0.63
CDK3-201ENST00000425876 KLF12Q9Y4X4 402 aa11.14□□□□□ -0.63
CDK3-201ENST00000425876 CLPSL1A2RUU4 121 aa11.13□□□□□ -0.63
CDK3-201ENST00000425876 PSMB8P28062 276 aa11.13□□□□□ -0.63
CDK3-201ENST00000425876 ARL3P36405 182 aa11.13□□□□□ -0.63
CDK3-201ENST00000425876 C1orf194Q5T5A4 169 aa11.13□□□□□ -0.63
CDK3-201ENST00000425876 Q8N2B8 174 aa11.13□□□□□ -0.63
CDK3-201ENST00000425876 SFRP2Q96HF1 295 aa11.13□□□□□ -0.63
CDK3-201ENST00000425876 IGF2BP2-AS1Q96M15 143 aa11.13□□□□□ -0.63
CDK3-201ENST00000425876 GPR82Q96P67 336 aa11.13□□□□□ -0.63
CDK3-201ENST00000425876 ATG101Q9BSB4 218 aa11.13□□□□□ -0.63
CDK3-201ENST00000425876 ZNF702PQ9H963 129 aa11.13□□□□□ -0.63
CDK3-201ENST00000425876 HIVEP1P15822 2718 aa11.13□□□□□ -0.63
CDK3-201ENST00000425876 PGPEP1LA6NFU8 196 aa11.12□□□□□ -0.63
CDK3-201ENST00000425876 SNRPCP09234 159 aaKnown RBP11.12□□□□□ -0.63
CDK3-201ENST00000425876 SRP14P37108 136 aaKnown RBP11.12□□□□□ -0.63
CDK3-201ENST00000425876 TMEM183BQ1AE95 376 aa11.12□□□□□ -0.63
CDK3-201ENST00000425876 SIGLEC15Q6ZMC9 328 aa11.12□□□□□ -0.63
CDK3-201ENST00000425876 ARL6IP6Q8N6S5 226 aa11.12□□□□□ -0.63
CDK3-201ENST00000425876 SMIM12Q96EX1 92 aa11.12□□□□□ -0.63
CDK3-201ENST00000425876 U3KQE9 123 aa11.12□□□□□ -0.63
CDK3-201ENST00000425876 TLN2Q9Y4G6 2542 aa11.12□□□□□ -0.63
CDK3-201ENST00000425876 IGHV3-35A0A0C4DH35 117 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 PPP5D1E7EU14 171 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 NDUFA4O00483 81 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 BUB3O43684 328 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 ZNF253O75346 499 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 TCRAP04437 139 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 PFN1P07737 140 aaKnown RBP11.11□□□□□ -0.63
CDK3-201ENST00000425876 RAB5AP20339 215 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 TMEM95Q3KNT9 176 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 TEX38Q6PEX7 206 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 OR8I2Q8N0Y5 310 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 OR5B12Q96R08 314 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 METTL26Q96S19 204 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 IMMP2LQ96T52 175 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 TRBV24-1A0A075B6N3 115 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 H3BTX0 84 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 K7EN84 100 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 GCGP01275 180 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 IGLV2-8P01709 118 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 CRYBA1P05813 215 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 ATF4P18848 351 aaPredicted RBP11.11□□□□□ -0.63
CDK3-201ENST00000425876 SLC35B1P78383 322 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 PSG9Q00887 426 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 OR4X2Q8NGF9 303 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 CMTM2Q8TAZ6 248 aa11.11□□□□□ -0.63
CDK3-201ENST00000425876 AURKAIP1Q9NWT8 199 aaPredicted RBP11.11□□□□□ -0.63
CDK3-201ENST00000425876 A0A087X0K7 114 aa11.1□□□□□ -0.63
CDK3-201ENST00000425876 TRBV6-1A0A0K0K1D8 114 aa11.1□□□□□ -0.63
CDK3-201ENST00000425876 ELANEP08246 267 aa11.1□□□□□ -0.63
CDK3-201ENST00000425876 HNF1AP20823 631 aa11.1□□□□□ -0.63
CDK3-201ENST00000425876 S100PP25815 95 aa11.1□□□□□ -0.63
CDK3-201ENST00000425876 GNG5P63218 68 aa11.1□□□□□ -0.63
CDK3-201ENST00000425876 FOXE3Q13461 319 aa11.1□□□□□ -0.63
CDK3-201ENST00000425876 IL17RELQ6ZVW7 336 aa11.1□□□□□ -0.63
CDK3-201ENST00000425876 OR10G8Q8NGN5 311 aa11.1□□□□□ -0.63
CDK3-201ENST00000425876 FMC1Q96HJ9 113 aa11.1□□□□□ -0.63
CDK3-201ENST00000425876 LINC00479Q96M42 142 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms