RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 NRN1Q9NPD7 142 aa18.24■□□□□ 0.51
VEGFA-209ENST00000425836 HMSDA8MTL9 139 aa18.23■□□□□ 0.51
VEGFA-209ENST00000425836 GCSAMLQ5JQS6 135 aa18.23■□□□□ 0.51
VEGFA-209ENST00000425836 MORN5Q5VZ52 161 aa18.23■□□□□ 0.51
VEGFA-209ENST00000425836 TCTE3Q8IZS6 198 aa18.23■□□□□ 0.51
VEGFA-209ENST00000425836 GALR1P47211 349 aa18.22■□□□□ 0.51
VEGFA-209ENST00000425836 GATAD1Q8WUU5 269 aa18.22■□□□□ 0.51
VEGFA-209ENST00000425836 GPR82Q96P67 336 aa18.22■□□□□ 0.51
VEGFA-209ENST00000425836 FAM110AQ9BQ89 295 aa18.22■□□□□ 0.51
VEGFA-209ENST00000425836 RFNGQ9Y644 331 aa18.22■□□□□ 0.51
VEGFA-209ENST00000425836 A8MZ25 164 aa18.21■□□□□ 0.51
VEGFA-209ENST00000425836 RPL7P18124 248 aaKnown RBP18.21■□□□□ 0.51
VEGFA-209ENST00000425836 CMC4P56277 68 aaPredicted RBP18.21■□□□□ 0.51
VEGFA-209ENST00000425836 C17orf77Q96MU5 243 aa18.21■□□□□ 0.51
VEGFA-209ENST00000425836 MAP6D1Q9H9H5 199 aa18.21■□□□□ 0.51
VEGFA-209ENST00000425836 RNF24Q9Y225 148 aa18.21■□□□□ 0.51
VEGFA-209ENST00000425836 PRKDCP78527 4128 aaKnown RBP18.21■□□□□ 0.5
VEGFA-209ENST00000425836 RPL7L1Q6DKI1 246 aaKnown RBP18.2■□□□□ 0.5
VEGFA-209ENST00000425836 AKAP14Q86UN6 197 aa18.2■□□□□ 0.5
VEGFA-209ENST00000425836 TUBA4BQ9H853 241 aa18.2■□□□□ 0.5
VEGFA-209ENST00000425836 FRMD6-AS1P0C7T7 363 aa18.19■□□□□ 0.5
VEGFA-209ENST00000425836 ZNF345Q14585 488 aa18.19■□□□□ 0.5
VEGFA-209ENST00000425836 FFAR4Q5NUL3 377 aa18.19■□□□□ 0.5
VEGFA-209ENST00000425836 KCNRGQ8N5I3 272 aa18.19■□□□□ 0.5
VEGFA-209ENST00000425836 HSD17B11Q8NBQ5 300 aa18.19■□□□□ 0.5
VEGFA-209ENST00000425836 CITED4Q96RK1 184 aa18.19■□□□□ 0.5
VEGFA-209ENST00000425836 SRD5A3Q9H8P0 318 aa18.19■□□□□ 0.5
VEGFA-209ENST00000425836 TIMM9Q9Y5J7 89 aa18.19■□□□□ 0.5
VEGFA-209ENST00000425836 TRAV5A0A0B4J249 113 aa18.18■□□□□ 0.5
VEGFA-209ENST00000425836 TAAR5O14804 337 aa18.18■□□□□ 0.5
VEGFA-209ENST00000425836 MRPS12O15235 138 aaKnown RBP18.18■□□□□ 0.5
VEGFA-209ENST00000425836 APRG1Q8IVJ8 170 aa18.18■□□□□ 0.5
VEGFA-209ENST00000425836 BORCS7-ASMTA0A0B4J1R7 106 aa18.17■□□□□ 0.5
VEGFA-209ENST00000425836 SOCS3O14543 225 aa18.17■□□□□ 0.5
VEGFA-209ENST00000425836 ZNF688P0C7X2 276 aa18.17■□□□□ 0.5
VEGFA-209ENST00000425836 CXCL2P19875 107 aa18.17■□□□□ 0.5
VEGFA-209ENST00000425836 ATP6V0CP27449 155 aa18.17■□□□□ 0.5
VEGFA-209ENST00000425836 DEFB131AP59861 70 aa18.17■□□□□ 0.5
VEGFA-209ENST00000425836 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.17■□□□□ 0.5
VEGFA-209ENST00000425836 CYTL1Q9NRR1 136 aa18.17■□□□□ 0.5
VEGFA-209ENST00000425836 ZNF124Q15973 351 aa18.17■□□□□ 0.5
VEGFA-209ENST00000425836 FAM78BQ5VT40 261 aa18.17■□□□□ 0.5
VEGFA-209ENST00000425836 SEPSECSQ9HD40 501 aaKnown RBP18.17■□□□□ 0.5
VEGFA-209ENST00000425836 ATF4P18848 351 aaPredicted RBP18.16■□□□□ 0.5
VEGFA-209ENST00000425836 CD300CQ08708 224 aa18.16■□□□□ 0.5
VEGFA-209ENST00000425836 BPIFA4PQ86YQ2 179 aa18.16■□□□□ 0.5
VEGFA-209ENST00000425836 A0A0D9SG52 128 aa18.15■□□□□ 0.5
VEGFA-209ENST00000425836 RBMY1BA6NDE4 496 aaKnown RBP18.15■□□□□ 0.5
VEGFA-209ENST00000425836 RBMY1EA6NEQ0 496 aaKnown RBP18.15■□□□□ 0.5
VEGFA-209ENST00000425836 RBMY1DP0C7P1 496 aaKnown RBP18.15■□□□□ 0.5
VEGFA-209ENST00000425836 MEOX2P50222 304 aa18.15■□□□□ 0.5
VEGFA-209ENST00000425836 SPATA31B1PQ5VZV4 182 aa18.15■□□□□ 0.5
VEGFA-209ENST00000425836 LINC00322Q6ZN03 302 aaPredicted RBP18.15■□□□□ 0.5
VEGFA-209ENST00000425836 B9D2Q9BPU9 175 aa18.15■□□□□ 0.5
VEGFA-209ENST00000425836 JTBO76095 146 aa18.14■□□□□ 0.49
VEGFA-209ENST00000425836 C1QBP02746 253 aa18.14■□□□□ 0.49
VEGFA-209ENST00000425836 SNRPD3P62318 126 aaKnown RBP18.14■□□□□ 0.49
VEGFA-209ENST00000425836 PSMG4Q5JS54 123 aa18.14■□□□□ 0.49
VEGFA-209ENST00000425836 MIR17HGQ75NE6 70 aa18.14■□□□□ 0.49
VEGFA-209ENST00000425836 ARPC5LQ9BPX5 153 aa18.14■□□□□ 0.49
VEGFA-209ENST00000425836 PSMG3Q9BT73 122 aaPredicted RBP18.14■□□□□ 0.49
VEGFA-209ENST00000425836 A0A087X0K7 114 aa18.13■□□□□ 0.49
VEGFA-209ENST00000425836 OR2G3Q8NGZ4 309 aa18.13■□□□□ 0.49
VEGFA-209ENST00000425836 SH3BGRL3Q9H299 93 aa18.13■□□□□ 0.49
VEGFA-209ENST00000425836 ISLRO14498 428 aa18.13■□□□□ 0.49
VEGFA-209ENST00000425836 ID1P41134 155 aa18.13■□□□□ 0.49
VEGFA-209ENST00000425836 PSMB3P49720 205 aa18.13■□□□□ 0.49
VEGFA-209ENST00000425836 SAMD13Q5VXD3 122 aa18.13■□□□□ 0.49
VEGFA-209ENST00000425836 C16orf92Q96LL3 132 aa18.13■□□□□ 0.49
VEGFA-209ENST00000425836 MRPL32Q9BYC8 188 aaKnown RBP18.13■□□□□ 0.49
VEGFA-209ENST00000425836 FUT9Q9Y231 359 aa18.13■□□□□ 0.49
VEGFA-209ENST00000425836 SNRPCP09234 159 aaKnown RBP18.12■□□□□ 0.49
VEGFA-209ENST00000425836 M6PRP20645 277 aa18.12■□□□□ 0.49
VEGFA-209ENST00000425836 ACOT6Q3I5F7 207 aaPredicted RBP18.12■□□□□ 0.49
VEGFA-209ENST00000425836 SBSPONQ8IVN8 264 aa18.12■□□□□ 0.49
VEGFA-209ENST00000425836 GNPNAT1Q96EK6 184 aaPredicted RBP18.12■□□□□ 0.49
VEGFA-209ENST00000425836 FAM167A-AS1Q96KT0 104 aa18.12■□□□□ 0.49
VEGFA-209ENST00000425836 SLC25A2Q9BXI2 301 aa18.12■□□□□ 0.49
VEGFA-209ENST00000425836 IGLC2P0DOY2 106 aa18.11■□□□□ 0.49
VEGFA-209ENST00000425836 RAB2AP61019 212 aa18.11■□□□□ 0.49
VEGFA-209ENST00000425836 LINC00052Q96N35 136 aa18.11■□□□□ 0.49
VEGFA-209ENST00000425836 ASCL2Q99929 193 aa18.11■□□□□ 0.49
VEGFA-209ENST00000425836 TMEM14CQ9P0S9 112 aa18.11■□□□□ 0.49
VEGFA-209ENST00000425836 H3BQ15 152 aa18.1■□□□□ 0.49
VEGFA-209ENST00000425836 BCL2L11O43521 198 aa18.1■□□□□ 0.49
VEGFA-209ENST00000425836 SERF2P84101 59 aa18.1■□□□□ 0.49
VEGFA-209ENST00000425836 TMUB2Q71RG4 321 aa18.1■□□□□ 0.49
VEGFA-209ENST00000425836 HYLS1Q96M11 299 aa18.1■□□□□ 0.49
VEGFA-209ENST00000425836 HRH4Q9H3N8 390 aa18.1■□□□□ 0.49
VEGFA-209ENST00000425836 TRAV8-2A0A0B4J237 113 aa18.09■□□□□ 0.49
VEGFA-209ENST00000425836 RHOBP62745 196 aa18.09■□□□□ 0.49
VEGFA-209ENST00000425836 LGALSLQ3ZCW2 172 aaPredicted RBP18.09■□□□□ 0.49
VEGFA-209ENST00000425836 C20orf173Q96LM9 149 aa18.09■□□□□ 0.49
VEGFA-209ENST00000425836 DNAH9Q9NYC9 4486 aa18.09■□□□□ 0.49
VEGFA-209ENST00000425836 LOC102724200A0A096LPH7 203 aaPredicted RBP18.08■□□□□ 0.49
VEGFA-209ENST00000425836 KANTRA0A1W2PQU2 76 aa18.08■□□□□ 0.49
VEGFA-209ENST00000425836 IGFL4Q6B9Z1 124 aa18.08■□□□□ 0.49
VEGFA-209ENST00000425836 OR10G4Q8NGN3 311 aa18.08■□□□□ 0.49
VEGFA-209ENST00000425836 OR10G9Q8NGN4 311 aa18.08■□□□□ 0.49
VEGFA-209ENST00000425836 OR10G7Q8NGN6 311 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms