RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 INSP01308 110 aa12.29□□□□□ -0.44
HDAC7-208ENST00000425451 RAB11AP62491 216 aa12.29□□□□□ -0.44
HDAC7-208ENST00000425451 BAP18Q8IXM2 172 aa12.29□□□□□ -0.44
HDAC7-208ENST00000425451 OR1B1Q8NGR6 318 aa12.29□□□□□ -0.44
HDAC7-208ENST00000425451 LINC00588Q9Y4M8 146 aa12.29□□□□□ -0.44
HDAC7-208ENST00000425451 F5H768 121 aa12.28□□□□□ -0.44
HDAC7-208ENST00000425451 NUDT3O95989 172 aa12.28□□□□□ -0.44
HDAC7-208ENST00000425451 ANXA3P12429 323 aa12.28□□□□□ -0.44
HDAC7-208ENST00000425451 ORM2P19652 201 aa12.28□□□□□ -0.44
HDAC7-208ENST00000425451 MCUBQ9NWR8 336 aa12.28□□□□□ -0.44
HDAC7-208ENST00000425451 RABL2AQ9UBK7 228 aaPredicted RBP12.28□□□□□ -0.44
HDAC7-208ENST00000425451 PAIP2BQ9ULR5 123 aaKnown RBP12.28□□□□□ -0.44
HDAC7-208ENST00000425451 RABL2BQ9UNT1 228 aa12.28□□□□□ -0.44
HDAC7-208ENST00000425451 TRAV12-2A0A075B6T6 113 aa12.27□□□□□ -0.45
HDAC7-208ENST00000425451 DUXBA0A1W2PPF3 345 aa12.27□□□□□ -0.45
HDAC7-208ENST00000425451 B2MP61769 119 aa12.27□□□□□ -0.45
HDAC7-208ENST00000425451 GPR141Q7Z602 305 aa12.27□□□□□ -0.45
HDAC7-208ENST00000425451 GPR82Q96P67 336 aa12.27□□□□□ -0.45
HDAC7-208ENST00000425451 CBY3A6NI87 242 aa12.26□□□□□ -0.45
HDAC7-208ENST00000425451 ATP5G1P05496 136 aa12.26□□□□□ -0.45
HDAC7-208ENST00000425451 SLC25A6P12236 298 aa12.26□□□□□ -0.45
HDAC7-208ENST00000425451 ATP5G3P48201 142 aa12.26□□□□□ -0.45
HDAC7-208ENST00000425451 LRTM2Q8N967 370 aa12.26□□□□□ -0.45
HDAC7-208ENST00000425451 BPIFCQ8NFQ6 507 aa12.26□□□□□ -0.45
HDAC7-208ENST00000425451 SOSTQ9BQB4 213 aa12.26□□□□□ -0.45
HDAC7-208ENST00000425451 SLC25A39Q9BZJ4 359 aaPredicted RBP12.26□□□□□ -0.45
HDAC7-208ENST00000425451 CCL18P55774 89 aa12.25□□□□□ -0.45
HDAC7-208ENST00000425451 TMEM128Q5BJH2 165 aa12.25□□□□□ -0.45
HDAC7-208ENST00000425451 Q8N1X5 172 aa12.25□□□□□ -0.45
HDAC7-208ENST00000425451 DYNC2LI1Q8TCX1 351 aa12.25□□□□□ -0.45
HDAC7-208ENST00000425451 RNF141Q8WVD5 230 aa12.25□□□□□ -0.45
HDAC7-208ENST00000425451 TMEM147Q9BVK8 224 aa12.25□□□□□ -0.45
HDAC7-208ENST00000425451 APOBP04114 4563 aaKnown RBP12.24□□□□□ -0.45
HDAC7-208ENST00000425451 H3BRN7 92 aa12.24□□□□□ -0.45
HDAC7-208ENST00000425451 BOLA2-SMG1P6H3BVE0 249 aa12.24□□□□□ -0.45
HDAC7-208ENST00000425451 SYNGR2O43760 224 aa12.24□□□□□ -0.45
HDAC7-208ENST00000425451 FGL1Q08830 312 aa12.24□□□□□ -0.45
HDAC7-208ENST00000425451 CIB3Q96Q77 187 aaPredicted RBP12.24□□□□□ -0.45
HDAC7-208ENST00000425451 LINC01587Q99440 93 aa12.24□□□□□ -0.45
HDAC7-208ENST00000425451 RSL24D1Q9UHA3 163 aaKnown RBP12.24□□□□□ -0.45
HDAC7-208ENST00000425451 PIGBOS1A0A0B4J2F0 54 aa12.23□□□□□ -0.45
HDAC7-208ENST00000425451 WRBO00258 174 aa12.23□□□□□ -0.45
HDAC7-208ENST00000425451 MED6O75586 246 aa12.23□□□□□ -0.45
HDAC7-208ENST00000425451 TAS2R60P59551 318 aa12.23□□□□□ -0.45
HDAC7-208ENST00000425451 SSX7Q7RTT5 188 aa12.23□□□□□ -0.45
HDAC7-208ENST00000425451 TMED4Q7Z7H5 227 aa12.23□□□□□ -0.45
HDAC7-208ENST00000425451 ZNF738Q8NE65 137 aa12.23□□□□□ -0.45
HDAC7-208ENST00000425451 OR8A1Q8NGG7 326 aa12.23□□□□□ -0.45
HDAC7-208ENST00000425451 SHANK2-AS3Q9BTD1 123 aa12.23□□□□□ -0.45
HDAC7-208ENST00000425451 KRTAP1-5Q9BYS1 174 aa12.23□□□□□ -0.45
HDAC7-208ENST00000425451 CXCL3P19876 107 aa12.22□□□□□ -0.45
HDAC7-208ENST00000425451 RPP30P78346 268 aaKnown RBP12.22□□□□□ -0.45
HDAC7-208ENST00000425451 HIST1H1AQ02539 215 aaPredicted RBP12.22□□□□□ -0.45
HDAC7-208ENST00000425451 AKR1C1Q04828 323 aa12.22□□□□□ -0.45
HDAC7-208ENST00000425451 SPANXN5Q5MJ07 72 aa12.22□□□□□ -0.45
HDAC7-208ENST00000425451 ACOT7LQ6ZUV0 252 aa12.22□□□□□ -0.45
HDAC7-208ENST00000425451 TMEM144Q7Z5S9 345 aa12.22□□□□□ -0.45
HDAC7-208ENST00000425451 SPATA12Q7Z6I5 190 aa12.22□□□□□ -0.45
HDAC7-208ENST00000425451 TMEM256Q8N2U0 113 aa12.22□□□□□ -0.45
HDAC7-208ENST00000425451 CCDC59Q9P031 241 aaKnown RBP12.22□□□□□ -0.45
HDAC7-208ENST00000425451 H3BP45 60 aa12.21□□□□□ -0.45
HDAC7-208ENST00000425451 PRB4P10163 310 aaPredicted RBP12.21□□□□□ -0.45
HDAC7-208ENST00000425451 HTN1P15515 57 aa12.21□□□□□ -0.45
HDAC7-208ENST00000425451 VAMP1P23763 118 aa12.21□□□□□ -0.45
HDAC7-208ENST00000425451 S100A7P31151 101 aa12.21□□□□□ -0.45
HDAC7-208ENST00000425451 TNFSF8P32971 234 aa12.21□□□□□ -0.45
HDAC7-208ENST00000425451 RNASE8Q8TDE3 154 aaKnown RBP12.21□□□□□ -0.45
HDAC7-208ENST00000425451 C16orf74Q96GX8 76 aa12.21□□□□□ -0.45
HDAC7-208ENST00000425451 Q9H8V8 135 aa12.21□□□□□ -0.45
HDAC7-208ENST00000425451 TIMM8BQ9Y5J9 83 aaPredicted RBP12.21□□□□□ -0.45
HDAC7-208ENST00000425451 DNAH5Q8TE73 4624 aa12.21□□□□□ -0.45
HDAC7-208ENST00000425451 RPL7P18124 248 aaKnown RBP12.2□□□□□ -0.46
HDAC7-208ENST00000425451 RHOBP62745 196 aa12.2□□□□□ -0.46
HDAC7-208ENST00000425451 PSG3Q16557 428 aa12.2□□□□□ -0.46
HDAC7-208ENST00000425451 CYP2G1PQ6ZSU1 146 aa12.2□□□□□ -0.46
HDAC7-208ENST00000425451 UHRF2Q96PU4 802 aa12.2□□□□□ -0.46
HDAC7-208ENST00000425451 SLIRPQ9GZT3 109 aaKnown RBP12.2□□□□□ -0.46
HDAC7-208ENST00000425451 NOP10Q9NPE3 64 aaKnown RBP12.2□□□□□ -0.46
HDAC7-208ENST00000425451 HIGD1AQ9Y241 93 aa12.2□□□□□ -0.46
HDAC7-208ENST00000425451 A0A087X0K7 114 aa12.19□□□□□ -0.46
HDAC7-208ENST00000425451 FABP12A6NFH5 140 aa12.19□□□□□ -0.46
HDAC7-208ENST00000425451 HYPMO75409 117 aa12.19□□□□□ -0.46
HDAC7-208ENST00000425451 SFT2D2O95562 160 aa12.19□□□□□ -0.46
HDAC7-208ENST00000425451 IL5P05113 134 aa12.19□□□□□ -0.46
HDAC7-208ENST00000425451 PLP1P60201 277 aa12.19□□□□□ -0.46
HDAC7-208ENST00000425451 KRTAP10-2P60368 255 aa12.19□□□□□ -0.46
HDAC7-208ENST00000425451 RAP2BP61225 183 aa12.19□□□□□ -0.46
HDAC7-208ENST00000425451 PPP1R1AQ13522 171 aa12.19□□□□□ -0.46
HDAC7-208ENST00000425451 CLINT1Q14677 625 aa12.19□□□□□ -0.46
HDAC7-208ENST00000425451 ZNF493Q6ZR52 646 aa12.19□□□□□ -0.46
HDAC7-208ENST00000425451 TRIM63Q969Q1 353 aa12.19□□□□□ -0.46
HDAC7-208ENST00000425451 MRPS26Q9BYN8 205 aaKnown RBP12.19□□□□□ -0.46
HDAC7-208ENST00000425451 SCRT2Q9NQ03 307 aa12.19□□□□□ -0.46
HDAC7-208ENST00000425451 STRAPQ9Y3F4 350 aaKnown RBP12.19□□□□□ -0.46
HDAC7-208ENST00000425451 PMS2P5A8MQ11 134 aa12.18□□□□□ -0.46
HDAC7-208ENST00000425451 MRPS12O15235 138 aaKnown RBP12.18□□□□□ -0.46
HDAC7-208ENST00000425451 HOXB5P09067 269 aa12.18□□□□□ -0.46
HDAC7-208ENST00000425451 ID3Q02535 119 aa12.18□□□□□ -0.46
HDAC7-208ENST00000425451 KIR3DS1Q14943 382 aa12.18□□□□□ -0.46
HDAC7-208ENST00000425451 PATE2Q6UY27 113 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms