RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 RPH3ALQ9UNE2 315 aa12.08□□□□□ -0.48
C9orf3-204ENST00000424143 PLCE1Q9P212 2302 aa12.07□□□□□ -0.48
C9orf3-204ENST00000424143 TNRC18O15417 2968 aaPredicted RBP12.07□□□□□ -0.48
C9orf3-204ENST00000424143 NAV3Q8IVL0 2385 aa12.07□□□□□ -0.48
C9orf3-204ENST00000424143 ENSAO43768 121 aaKnown RBP12.07□□□□□ -0.48
C9orf3-204ENST00000424143 PSG3Q16557 428 aa12.07□□□□□ -0.48
C9orf3-204ENST00000424143 LGALS9BQ3B8N2 356 aa12.07□□□□□ -0.48
C9orf3-204ENST00000424143 LGALS9CQ6DKI2 356 aa12.07□□□□□ -0.48
C9orf3-204ENST00000424143 SIGLEC15Q6ZMC9 328 aa12.07□□□□□ -0.48
C9orf3-204ENST00000424143 GOLT1AQ6ZVE7 132 aa12.07□□□□□ -0.48
C9orf3-204ENST00000424143 PRNTQ86SH4 94 aa12.07□□□□□ -0.48
C9orf3-204ENST00000424143 SGK494Q96LW2 274 aa12.07□□□□□ -0.48
C9orf3-204ENST00000424143 RASL11BQ9BPW5 248 aa12.07□□□□□ -0.48
C9orf3-204ENST00000424143 PSG8Q9UQ74 426 aa12.07□□□□□ -0.48
C9orf3-204ENST00000424143 IGHV1-3A0A0C4DH29 117 aa12.06□□□□□ -0.48
C9orf3-204ENST00000424143 M0QZ24 198 aa12.06□□□□□ -0.48
C9orf3-204ENST00000424143 MRPS12O15235 138 aaKnown RBP12.06□□□□□ -0.48
C9orf3-204ENST00000424143 IGKV1-17P01599 117 aa12.06□□□□□ -0.48
C9orf3-204ENST00000424143 FA2HQ7L5A8 372 aa12.06□□□□□ -0.48
C9orf3-204ENST00000424143 RNASE6Q93091 150 aaKnown RBP12.06□□□□□ -0.48
C9orf3-204ENST00000424143 ZC2HC1AQ96GY0 325 aa12.06□□□□□ -0.48
C9orf3-204ENST00000424143 LYZP61626 148 aa12.05□□□□□ -0.48
C9orf3-204ENST00000424143 SRSF2Q01130 221 aaKnown RBP12.05□□□□□ -0.48
C9orf3-204ENST00000424143 Q6ZVH6 145 aa12.05□□□□□ -0.48
C9orf3-204ENST00000424143 PIFOQ8TCI5 191 aa12.05□□□□□ -0.48
C9orf3-204ENST00000424143 SRSF12Q8WXF0 261 aaKnown RBP12.05□□□□□ -0.48
C9orf3-204ENST00000424143 RAB1BQ9H0U4 201 aa12.05□□□□□ -0.48
C9orf3-204ENST00000424143 INSIG2Q9Y5U4 225 aa12.05□□□□□ -0.48
C9orf3-204ENST00000424143 MUC21A0A0G2JKD1 596 aa12.04□□□□□ -0.48
C9orf3-204ENST00000424143 MUC21A0A140T8X8 626 aa12.04□□□□□ -0.48
C9orf3-204ENST00000424143 WI2-2373I1.2A0A1W2PRP0 233 aa12.04□□□□□ -0.48
C9orf3-204ENST00000424143 BUB1B-PAK6H3BSN5 160 aa12.04□□□□□ -0.48
C9orf3-204ENST00000424143 ARMS2P0C7Q2 107 aa12.04□□□□□ -0.48
C9orf3-204ENST00000424143 CEACAM3P40198 252 aa12.04□□□□□ -0.48
C9orf3-204ENST00000424143 ARF6P62330 175 aa12.04□□□□□ -0.48
C9orf3-204ENST00000424143 MUC21Q5SSG8 566 aa12.04□□□□□ -0.48
C9orf3-204ENST00000424143 C2orf91Q6ZV80 131 aa12.04□□□□□ -0.48
C9orf3-204ENST00000424143 RALYQ9UKM9 306 aaKnown RBP12.04□□□□□ -0.48
C9orf3-204ENST00000424143 LY6LH3BQJ8 138 aa12.04□□□□□ -0.48
C9orf3-204ENST00000424143 APOBEC3AP31941 199 aaPredicted RBP12.04□□□□□ -0.48
C9orf3-204ENST00000424143 BSPH1Q075Z2 132 aa12.04□□□□□ -0.48
C9orf3-204ENST00000424143 OR9G4Q8NGQ1 327 aa12.04□□□□□ -0.48
C9orf3-204ENST00000424143 PRSS3P2Q8NHM4 247 aa12.04□□□□□ -0.48
C9orf3-204ENST00000424143 CCL17Q92583 94 aa12.04□□□□□ -0.48
C9orf3-204ENST00000424143 CST9LQ9H4G1 147 aa12.04□□□□□ -0.48
C9orf3-204ENST00000424143 TRAV8-1A0A0A6YYK1 113 aa12.03□□□□□ -0.48
C9orf3-204ENST00000424143 K7EIM0 57 aa12.03□□□□□ -0.48
C9orf3-204ENST00000424143 FGF6P10767 208 aa12.03□□□□□ -0.48
C9orf3-204ENST00000424143 COTL1Q14019 142 aa12.03□□□□□ -0.48
C9orf3-204ENST00000424143 LINC01559Q495D7 138 aa12.03□□□□□ -0.48
C9orf3-204ENST00000424143 TMEM97Q5BJF2 176 aa12.03□□□□□ -0.48
C9orf3-204ENST00000424143 FAM104BQ5XKR9 115 aa12.03□□□□□ -0.48
C9orf3-204ENST00000424143 WFDC8Q8IUA0 241 aa12.03□□□□□ -0.48
C9orf3-204ENST00000424143 EXOC3-AS1Q8N2X6 119 aa12.03□□□□□ -0.48
C9orf3-204ENST00000424143 ZNF414Q96IQ9 312 aa12.03□□□□□ -0.48
C9orf3-204ENST00000424143 LINC01546A6NGU7 62 aa12.02□□□□□ -0.49
C9orf3-204ENST00000424143 SHISA9B4DS77 424 aa12.02□□□□□ -0.49
C9orf3-204ENST00000424143 H3BRM9 83 aa12.02□□□□□ -0.49
C9orf3-204ENST00000424143 CT45A10P0DMU9 189 aa12.02□□□□□ -0.49
C9orf3-204ENST00000424143 CD24P25063 80 aa12.02□□□□□ -0.49
C9orf3-204ENST00000424143 CRIP1P50238 77 aa12.02□□□□□ -0.49
C9orf3-204ENST00000424143 PSG9Q00887 426 aa12.02□□□□□ -0.49
C9orf3-204ENST00000424143 PLGLAQ15195 96 aa12.02□□□□□ -0.49
C9orf3-204ENST00000424143 OCIAD2Q56VL3 154 aa12.02□□□□□ -0.49
C9orf3-204ENST00000424143 BOD1L2Q8IYS8 172 aa12.02□□□□□ -0.49
C9orf3-204ENST00000424143 ZNF491Q8N8L2 437 aa12.02□□□□□ -0.49
C9orf3-204ENST00000424143 FRYLO94915 3013 aa12.02□□□□□ -0.49
C9orf3-204ENST00000424143 A0A0G2JNJ9 132 aa12.01□□□□□ -0.49
C9orf3-204ENST00000424143 DEFB124Q8NES8 71 aa12.01□□□□□ -0.49
C9orf3-204ENST00000424143 COL25A1Q9BXS0 654 aaPredicted RBP12.01□□□□□ -0.49
C9orf3-204ENST00000424143 Q9UFV3 132 aa12.01□□□□□ -0.49
C9orf3-204ENST00000424143 OR2T8A6NH00 312 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 CNTFRP26992 372 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 PAX8Q06710 450 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 AMMECR1LQ6DCA0 310 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 PRSS33Q8NF86 280 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 OR4X2Q8NGF9 303 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 IGFBPL1Q8WX77 278 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 RNF125Q96EQ8 232 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 A0A096LNJ9 63 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 IGHV3-72A0A0B4J1Y9 119 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 A6NDN8 102 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 B9A039 149 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 H3BTX0 84 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 K7ERU9 68 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 PRRG2O14669 202 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 ZNF138P52744 262 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 ORMDL3Q8N138 153 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 NPBQ8NG41 125 aa12□□□□□ -0.49
C9orf3-204ENST00000424143 S100A7P31151 101 aa11.99□□□□□ -0.49
C9orf3-204ENST00000424143 HSD52Q0P140 79 aa11.99□□□□□ -0.49
C9orf3-204ENST00000424143 UFSP1Q6NVU6 142 aa11.99□□□□□ -0.49
C9orf3-204ENST00000424143 GTF2H5Q6ZYL4 71 aa11.99□□□□□ -0.49
C9orf3-204ENST00000424143 SMIM15Q7Z3B0 74 aa11.99□□□□□ -0.49
C9orf3-204ENST00000424143 FBXL15Q9H469 300 aa11.99□□□□□ -0.49
C9orf3-204ENST00000424143 AAMDCQ9H7C9 122 aa11.99□□□□□ -0.49
C9orf3-204ENST00000424143 SIGLEC8Q9NYZ4 499 aa11.99□□□□□ -0.49
C9orf3-204ENST00000424143 ICE1Q9Y2F5 2266 aa11.98□□□□□ -0.49
C9orf3-204ENST00000424143 A0A087X0K7 114 aa11.98□□□□□ -0.49
C9orf3-204ENST00000424143 SPAARA0A1B0GVQ0 90 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms