RNA–Protein interactions for RNA: ENST00000423575.5

LINC00539-202, long intergenic non-protein coding RNA 539, humanhuman

TSL 3 BASIC

Gene LINC00539, Length 699 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-202ENST00000423575 HELTA6NFD8 242 aa9.07□□□□□ -0.96
LINC00539-202ENST00000423575 PRB2P02812 416 aaPredicted RBP9.07□□□□□ -0.96
LINC00539-202ENST00000423575 CD5P06127 495 aa9.07□□□□□ -0.96
LINC00539-202ENST00000423575 S100A7P31151 101 aa9.07□□□□□ -0.96
LINC00539-202ENST00000423575 RAB2AP61019 212 aa9.07□□□□□ -0.96
LINC00539-202ENST00000423575 RPL11P62913 178 aaKnown RBP9.07□□□□□ -0.96
LINC00539-202ENST00000423575 SIGLEC15Q6ZMC9 328 aa9.07□□□□□ -0.96
LINC00539-202ENST00000423575 S100A7AQ86SG5 101 aa9.07□□□□□ -0.96
LINC00539-202ENST00000423575 GBGT1Q8N5D6 347 aa9.07□□□□□ -0.96
LINC00539-202ENST00000423575 GNPNAT1Q96EK6 184 aaPredicted RBP9.07□□□□□ -0.96
LINC00539-202ENST00000423575 M6PRP20645 277 aa9.06□□□□□ -0.96
LINC00539-202ENST00000423575 TFPI2P48307 235 aa9.06□□□□□ -0.96
LINC00539-202ENST00000423575 FAM78BQ5VT40 261 aa9.06□□□□□ -0.96
LINC00539-202ENST00000423575 MIR17HGQ75NE6 70 aa9.06□□□□□ -0.96
LINC00539-202ENST00000423575 STXBP6Q8NFX7 210 aa9.06□□□□□ -0.96
LINC00539-202ENST00000423575 C17orf77Q96MU5 243 aa9.06□□□□□ -0.96
LINC00539-202ENST00000423575 MS4A6AQ9H2W1 248 aa9.06□□□□□ -0.96
LINC00539-202ENST00000423575 SEPSECSQ9HD40 501 aaKnown RBP9.06□□□□□ -0.96
LINC00539-202ENST00000423575 ZMAT5Q9UDW3 170 aaKnown RBP9.06□□□□□ -0.96
LINC00539-202ENST00000423575 SMAD5-AS1Q9Y6J3 95 aa9.06□□□□□ -0.96
LINC00539-202ENST00000423575 FBN3Q75N90 2809 aa9.06□□□□□ -0.96
LINC00539-202ENST00000423575 BOLA2-SMG1P6H3BVE0 249 aa9.05□□□□□ -0.96
LINC00539-202ENST00000423575 MRPS12O15235 138 aaKnown RBP9.05□□□□□ -0.96
LINC00539-202ENST00000423575 EIF3GO75821 320 aaKnown RBP eCLIP9.05□□□□□ -0.96
LINC00539-202ENST00000423575 CD7P09564 240 aa9.05□□□□□ -0.96
LINC00539-202ENST00000423575 SPP1P10451 314 aa9.05□□□□□ -0.96
LINC00539-202ENST00000423575 RPL7P18124 248 aaKnown RBP9.05□□□□□ -0.96
LINC00539-202ENST00000423575 GALR1P47211 349 aa9.05□□□□□ -0.96
LINC00539-202ENST00000423575 SERF2P84101 59 aa9.05□□□□□ -0.96
LINC00539-202ENST00000423575 ACOT6Q3I5F7 207 aaPredicted RBP9.05□□□□□ -0.96
LINC00539-202ENST00000423575 WFDC3Q8IUB2 231 aa9.05□□□□□ -0.96
LINC00539-202ENST00000423575 FAM24BQ8N5W8 94 aa9.05□□□□□ -0.96
LINC00539-202ENST00000423575 STOML3Q8TAV4 291 aa9.05□□□□□ -0.96
LINC00539-202ENST00000423575 DCANP1Q8TF63 244 aa9.05□□□□□ -0.96
LINC00539-202ENST00000423575 GPR82Q96P67 336 aa9.05□□□□□ -0.96
LINC00539-202ENST00000423575 MRPL32Q9BYC8 188 aaKnown RBP9.05□□□□□ -0.96
LINC00539-202ENST00000423575 NRN1Q9NPD7 142 aa9.05□□□□□ -0.96
LINC00539-202ENST00000423575 AURKAIP1Q9NWT8 199 aaPredicted RBP9.05□□□□□ -0.96
LINC00539-202ENST00000423575 FUT9Q9Y231 359 aa9.05□□□□□ -0.96
LINC00539-202ENST00000423575 TRAV2A0A0B4J234 112 aa9.04□□□□□ -0.96
LINC00539-202ENST00000423575 OR4C46A6NHA9 309 aa9.04□□□□□ -0.96
LINC00539-202ENST00000423575 K7EQG2 157 aa9.04□□□□□ -0.96
LINC00539-202ENST00000423575 DNASE2O00115 360 aaPredicted RBP9.04□□□□□ -0.96
LINC00539-202ENST00000423575 TPT1P13693 172 aaKnown RBP9.04□□□□□ -0.96
LINC00539-202ENST00000423575 CD81P60033 236 aa9.04□□□□□ -0.96
LINC00539-202ENST00000423575 ODF3L2Q3SX64 289 aa9.04□□□□□ -0.96
LINC00539-202ENST00000423575 FAM122CQ6P4D5 195 aa9.04□□□□□ -0.96
LINC00539-202ENST00000423575 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.04□□□□□ -0.96
LINC00539-202ENST00000423575 BAP18Q8IXM2 172 aa9.04□□□□□ -0.96
LINC00539-202ENST00000423575 OR10G4Q8NGN3 311 aa9.04□□□□□ -0.96
LINC00539-202ENST00000423575 OR10G9Q8NGN4 311 aa9.04□□□□□ -0.96
LINC00539-202ENST00000423575 OR10G7Q8NGN6 311 aa9.04□□□□□ -0.96
LINC00539-202ENST00000423575 FAM167A-AS1Q96KT0 104 aa9.04□□□□□ -0.96
LINC00539-202ENST00000423575 SLC25A2Q9BXI2 301 aa9.04□□□□□ -0.96
LINC00539-202ENST00000423575 PLA2G2EQ9NZK7 142 aa9.04□□□□□ -0.96
LINC00539-202ENST00000423575 RNF24Q9Y225 148 aa9.04□□□□□ -0.96
LINC00539-202ENST00000423575 BOLA1Q9Y3E2 137 aa9.04□□□□□ -0.96
LINC00539-202ENST00000423575 A0A087X0K7 114 aa9.03□□□□□ -0.96
LINC00539-202ENST00000423575 SOCS3O14543 225 aa9.03□□□□□ -0.96
LINC00539-202ENST00000423575 IGLC2P0DOY2 106 aa9.03□□□□□ -0.96
LINC00539-202ENST00000423575 RHOBP62745 196 aa9.03□□□□□ -0.96
LINC00539-202ENST00000423575 EIF5AP63241 154 aaKnown RBP9.03□□□□□ -0.96
LINC00539-202ENST00000423575 PAFAH1B2P68402 229 aa9.03□□□□□ -0.96
LINC00539-202ENST00000423575 TMEM41BQ5BJD5 291 aa9.03□□□□□ -0.96
LINC00539-202ENST00000423575 SLC51BQ86UW2 128 aa9.03□□□□□ -0.96
LINC00539-202ENST00000423575 BPIFA4PQ86YQ2 179 aa9.03□□□□□ -0.96
LINC00539-202ENST00000423575 Q8N1Y9 231 aa9.03□□□□□ -0.96
LINC00539-202ENST00000423575 RPP25LQ8N5L8 163 aaKnown RBP9.03□□□□□ -0.96
LINC00539-202ENST00000423575 WFDC10AQ9H1F0 79 aa9.03□□□□□ -0.96
LINC00539-202ENST00000423575 RPRMQ9NS64 109 aa9.03□□□□□ -0.96
LINC00539-202ENST00000423575 C19orf73Q9NVV2 129 aa9.03□□□□□ -0.96
LINC00539-202ENST00000423575 H3BQ15 152 aa9.02□□□□□ -0.97
LINC00539-202ENST00000423575 H3BTX0 84 aa9.02□□□□□ -0.97
LINC00539-202ENST00000423575 K7EIL1 84 aa9.02□□□□□ -0.97
LINC00539-202ENST00000423575 MBP02144 154 aa9.02□□□□□ -0.97
LINC00539-202ENST00000423575 SNRPCP09234 159 aaKnown RBP9.02□□□□□ -0.97
LINC00539-202ENST00000423575 SEC11BP0C7V7 166 aa9.02□□□□□ -0.97
LINC00539-202ENST00000423575 PYYP10082 97 aa9.02□□□□□ -0.97
LINC00539-202ENST00000423575 ATF4P18848 351 aaPredicted RBP9.02□□□□□ -0.97
LINC00539-202ENST00000423575 CDC34P49427 236 aaPredicted RBP9.02□□□□□ -0.97
LINC00539-202ENST00000423575 AKR1C8PQ5T2L2 129 aa9.02□□□□□ -0.97
LINC00539-202ENST00000423575 GTSCR1Q86UQ5 136 aa9.02□□□□□ -0.97
LINC00539-202ENST00000423575 TMED6Q8WW62 240 aa9.02□□□□□ -0.97
LINC00539-202ENST00000423575 ZNF503Q96F45 646 aa9.02□□□□□ -0.97
LINC00539-202ENST00000423575 TMEM14CQ9P0S9 112 aa9.02□□□□□ -0.97
LINC00539-202ENST00000423575 UBQLN2Q9UHD9 624 aa9.02□□□□□ -0.97
LINC00539-202ENST00000423575 A0A1W2PPV4 95 aa9.01□□□□□ -0.97
LINC00539-202ENST00000423575 ZNF688P0C7X2 276 aa9.01□□□□□ -0.97
LINC00539-202ENST00000423575 C4BPBP20851 252 aa9.01□□□□□ -0.97
LINC00539-202ENST00000423575 MEOX2P50222 304 aa9.01□□□□□ -0.97
LINC00539-202ENST00000423575 DEFA6Q01524 100 aa9.01□□□□□ -0.97
LINC00539-202ENST00000423575 ZNF726P1Q15940 193 aa9.01□□□□□ -0.97
LINC00539-202ENST00000423575 SSX7Q7RTT5 188 aa9.01□□□□□ -0.97
LINC00539-202ENST00000423575 RAB24Q969Q5 203 aa9.01□□□□□ -0.97
LINC00539-202ENST00000423575 MAP6D1Q9H9H5 199 aa9.01□□□□□ -0.97
LINC00539-202ENST00000423575 ZNF586Q9NXT0 402 aa9.01□□□□□ -0.97
LINC00539-202ENST00000423575 TRAV8-2A0A0B4J237 113 aa9□□□□□ -0.97
LINC00539-202ENST00000423575 SLC17A3O00476 420 aa9□□□□□ -0.97
LINC00539-202ENST00000423575 HMGB3O15347 200 aaKnown RBP9□□□□□ -0.97
LINC00539-202ENST00000423575 OR7C2O60412 319 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms