RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 Q8N3U1 123 aa8.05□□□□□ -1.12
USP49-204ENST00000423567 LINC00052Q96N35 136 aa8.05□□□□□ -1.12
USP49-204ENST00000423567 NMES1Q9C002 83 aa8.05□□□□□ -1.12
USP49-204ENST00000423567 UQCC1Q9NVA1 299 aa8.05□□□□□ -1.12
USP49-204ENST00000423567 AGPAT2O15120 278 aa8.04□□□□□ -1.12
USP49-204ENST00000423567 SIX6O95475 246 aa8.04□□□□□ -1.12
USP49-204ENST00000423567 H2AFB1P0C5Y9 115 aa8.04□□□□□ -1.12
USP49-204ENST00000423567 RPL7P18124 248 aaKnown RBP8.04□□□□□ -1.12
USP49-204ENST00000423567 ATF4P18848 351 aaPredicted RBP8.04□□□□□ -1.12
USP49-204ENST00000423567 PLP1P60201 277 aa8.04□□□□□ -1.12
USP49-204ENST00000423567 IL15RAQ13261 267 aa8.04□□□□□ -1.12
USP49-204ENST00000423567 ZFAND6Q6FIF0 208 aa8.04□□□□□ -1.12
USP49-204ENST00000423567 TRPT1Q86TN4 253 aaKnown RBP8.04□□□□□ -1.12
USP49-204ENST00000423567 TMEM252Q8N6L7 170 aa8.04□□□□□ -1.12
USP49-204ENST00000423567 C16orf92Q96LL3 132 aa8.04□□□□□ -1.12
USP49-204ENST00000423567 RSG1Q9BU20 258 aa8.04□□□□□ -1.12
USP49-204ENST00000423567 SLC25A39Q9BZJ4 359 aaPredicted RBP8.04□□□□□ -1.12
USP49-204ENST00000423567 SLC25A31Q9H0C2 315 aa8.04□□□□□ -1.12
USP49-204ENST00000423567 ARL6Q9H0F7 186 aa8.04□□□□□ -1.12
USP49-204ENST00000423567 SLC25A32Q9H2D1 315 aa8.04□□□□□ -1.12
USP49-204ENST00000423567 E5RGE8 158 aa8.03□□□□□ -1.12
USP49-204ENST00000423567 H3BRN7 92 aa8.03□□□□□ -1.12
USP49-204ENST00000423567 ISLRO14498 428 aa8.03□□□□□ -1.12
USP49-204ENST00000423567 CAMLGP49069 296 aa8.03□□□□□ -1.12
USP49-204ENST00000423567 BAXQ07812 192 aa8.03□□□□□ -1.12
USP49-204ENST00000423567 ATP6V1FQ16864 119 aa8.03□□□□□ -1.12
USP49-204ENST00000423567 LRRC37A5PQ49AS3 106 aa8.03□□□□□ -1.12
USP49-204ENST00000423567 Q6ZRG5 221 aa8.03□□□□□ -1.12
USP49-204ENST00000423567 RARRES2Q99969 163 aa8.03□□□□□ -1.12
USP49-204ENST00000423567 SHANK2-AS3Q9BTD1 123 aa8.03□□□□□ -1.12
USP49-204ENST00000423567 SCRT1Q9BWW7 348 aa8.03□□□□□ -1.12
USP49-204ENST00000423567 C11orf1Q9H5F2 150 aa8.03□□□□□ -1.12
USP49-204ENST00000423567 NBEAL2Q6ZNJ1 2754 aa8.02□□□□□ -1.13
USP49-204ENST00000423567 A0A0J9YWU9 116 aa8.02□□□□□ -1.13
USP49-204ENST00000423567 UBE2L5PA0A1B0GUS4 154 aa8.02□□□□□ -1.13
USP49-204ENST00000423567 IGSF23A1L1A6 192 aa8.02□□□□□ -1.13
USP49-204ENST00000423567 COX7A2P2O60397 106 aa8.02□□□□□ -1.13
USP49-204ENST00000423567 PTTG1O95997 202 aa8.02□□□□□ -1.13
USP49-204ENST00000423567 PET100P0DJ07 73 aa8.02□□□□□ -1.13
USP49-204ENST00000423567 FGL1Q08830 312 aa8.02□□□□□ -1.13
USP49-204ENST00000423567 EBLN2Q6P2I7 272 aa8.02□□□□□ -1.13
USP49-204ENST00000423567 FOXI2Q6ZQN5 318 aa8.02□□□□□ -1.13
USP49-204ENST00000423567 OR11H2Q8NH07 326 aa8.02□□□□□ -1.13
USP49-204ENST00000423567 UHRF2Q96PU4 802 aa8.02□□□□□ -1.13
USP49-204ENST00000423567 MGST2Q99735 147 aa8.02□□□□□ -1.13
USP49-204ENST00000423567 C1QTNF4Q9BXJ3 329 aa8.02□□□□□ -1.13
USP49-204ENST00000423567 ARV1Q9H2C2 271 aa8.02□□□□□ -1.13
USP49-204ENST00000423567 RPRMQ9NS64 109 aa8.02□□□□□ -1.13
USP49-204ENST00000423567 H3BMM0 161 aa8.01□□□□□ -1.13
USP49-204ENST00000423567 SOCS3O14543 225 aa8.01□□□□□ -1.13
USP49-204ENST00000423567 HLA-DRB4P13762 266 aa8.01□□□□□ -1.13
USP49-204ENST00000423567 VWC2Q2TAL6 325 aa8.01□□□□□ -1.13
USP49-204ENST00000423567 C10orf113Q5VZT2 155 aa8.01□□□□□ -1.13
USP49-204ENST00000423567 SPATA31B1PQ5VZV4 182 aa8.01□□□□□ -1.13
USP49-204ENST00000423567 LINC00305Q7Z4B0 112 aa8.01□□□□□ -1.13
USP49-204ENST00000423567 OR1L4Q8NGR5 311 aa8.01□□□□□ -1.13
USP49-204ENST00000423567 LRRC20Q8TCA0 184 aa8.01□□□□□ -1.13
USP49-204ENST00000423567 PPP1R1CQ8WVI7 109 aa8.01□□□□□ -1.13
USP49-204ENST00000423567 WDR83OSQ9Y284 106 aa8.01□□□□□ -1.13
USP49-204ENST00000423567 HLA-DRB4X5D2U9 266 aa8.01□□□□□ -1.13
USP49-204ENST00000423567 MPDU1O75352 247 aa8□□□□□ -1.13
USP49-204ENST00000423567 FGF7P21781 194 aa8□□□□□ -1.13
USP49-204ENST00000423567 H2BFSP57053 126 aa8□□□□□ -1.13
USP49-204ENST00000423567 EWSR1Q01844 656 aaKnown RBP eCLIP8□□□□□ -1.13
USP49-204ENST00000423567 MIC13Q5XKP0 118 aa8□□□□□ -1.13
USP49-204ENST00000423567 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8□□□□□ -1.13
USP49-204ENST00000423567 OR4B1Q8NGF8 309 aa8□□□□□ -1.13
USP49-204ENST00000423567 OR5C1Q8NGR4 320 aa8□□□□□ -1.13
USP49-204ENST00000423567 PFDN5Q99471 154 aa8□□□□□ -1.13
USP49-204ENST00000423567 MRPL18Q9H0U6 180 aaKnown RBP8□□□□□ -1.13
USP49-204ENST00000423567 SAV1Q9H4B6 383 aaPredicted RBP8□□□□□ -1.13
USP49-204ENST00000423567 OR5AC2Q9NZP5 309 aa8□□□□□ -1.13
USP49-204ENST00000423567 CXorf65A6NEN9 183 aa7.99□□□□□ -1.13
USP49-204ENST00000423567 C4BPBP20851 252 aa7.99□□□□□ -1.13
USP49-204ENST00000423567 RPL29P47914 159 aaKnown RBP7.99□□□□□ -1.13
USP49-204ENST00000423567 B2MP61769 119 aa7.99□□□□□ -1.13
USP49-204ENST00000423567 PATE2Q6UY27 113 aa7.99□□□□□ -1.13
USP49-204ENST00000423567 BPIFA4PQ86YQ2 179 aa7.99□□□□□ -1.13
USP49-204ENST00000423567 DNAJC4Q9NNZ3 241 aa7.99□□□□□ -1.13
USP49-204ENST00000423567 ALG5Q9Y673 324 aa7.99□□□□□ -1.13
USP49-204ENST00000423567 A0A087X0K7 114 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 MPC2O95563 127 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 IGKV3-20P01619 116 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 NHLH2Q02577 135 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 PMS2P11Q13670 270 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 CLINT1Q14677 625 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 OPCMLQ14982 345 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 GDF5OSQ5U4N7 250 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 LCN15Q6UWW0 184 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 ZNF709Q8N972 641 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 CHAC2Q8WUX2 184 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 TMEM37Q8WXS4 190 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 MED28Q9H204 178 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 C11orf68Q9H3H3 251 aaKnown RBP7.98□□□□□ -1.13
USP49-204ENST00000423567 KCNIP2Q9NS61 270 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 SLC39A9Q9NUM3 307 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 CLEC5AQ9NY25 188 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 XCL2Q9UBD3 114 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 PXMP4Q9Y6I8 212 aa7.98□□□□□ -1.13
USP49-204ENST00000423567 A0A0J9YX75 114 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms