RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 HIST2H2BDQ6DRA6 164 aa2.84□□□□□ -1.96
TOP2A-201ENST00000423485 ZNF497Q6ZNH5 498 aa2.84□□□□□ -1.96
TOP2A-201ENST00000423485 POM121L12Q8N7R1 296 aa2.84□□□□□ -1.96
TOP2A-201ENST00000423485 SMIM4Q8WVI0 70 aa2.84□□□□□ -1.96
TOP2A-201ENST00000423485 C16orf74Q96GX8 76 aa2.84□□□□□ -1.96
TOP2A-201ENST00000423485 C1QTNF5Q9BXJ0 243 aa2.84□□□□□ -1.96
TOP2A-201ENST00000423485 NPVFQ9HCQ7 196 aa2.84□□□□□ -1.96
TOP2A-201ENST00000423485 VAX2Q9UIW0 290 aa2.84□□□□□ -1.96
TOP2A-201ENST00000423485 LSM5Q9Y4Y9 91 aaKnown RBP2.84□□□□□ -1.96
TOP2A-201ENST00000423485 HSPB11Q9Y547 144 aa2.84□□□□□ -1.96
TOP2A-201ENST00000423485 IGHV3OR16-13A0A075B7E8 117 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 IGHV3-74A0A0B4J1X5 117 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 IGHV3-66A0A0C4DH42 116 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 ZNF736B4DX44 427 aaPredicted RBP2.83□□□□□ -1.96
TOP2A-201ENST00000423485 GPR31O00270 319 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 SIVA1O15304 175 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 PDCD6O75340 191 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 IGHV3-53P01767 116 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 IGHA1P01876 353 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 RNASE4P34096 147 aaKnown RBP2.83□□□□□ -1.96
TOP2A-201ENST00000423485 SUMO2P61956 95 aaKnown RBP2.83□□□□□ -1.96
TOP2A-201ENST00000423485 RPL32P62910 135 aaKnown RBP2.83□□□□□ -1.96
TOP2A-201ENST00000423485 IGLV3-21P80748 117 aaPredicted RBP2.83□□□□□ -1.96
TOP2A-201ENST00000423485 FMODQ06828 376 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 MORN2Q502X0 79 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 FAM162BQ5T6X4 162 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 SUMF2Q8NBJ7 301 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 PFN4Q8NHR9 129 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 C18orf15Q96N68 181 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 DNAH8Q96JB1 4490 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 IGHV3-35A0A0C4DH35 117 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 A0A0J9YWU9 116 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 GAGE12BA1L429 117 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 GAGE7O76087 117 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 GAGE12FP0CL80 117 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 GAGE12GP0CL81 117 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 GAGE12IP0CL82 117 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 ASIPP42127 132 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 C10orf113Q5VZT2 155 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 CFAP77Q6ZQR2 320 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 SAXO1Q8IYX7 474 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 MAPKAPK5-AS1Q8N8E1 139 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 MRPL30Q8TCC3 161 aaKnown RBP2.83□□□□□ -1.96
TOP2A-201ENST00000423485 RHPN1-AS1Q9BWJ2 59 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 PARD6GQ9BYG4 376 aaPredicted RBP2.83□□□□□ -1.96
TOP2A-201ENST00000423485 TOLLIPQ9H0E2 274 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 C16orf95Q9H693 158 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 GEMIN7Q9H840 131 aaKnown RBP2.83□□□□□ -1.96
TOP2A-201ENST00000423485 EIF3GO75821 320 aaKnown RBP eCLIP2.83□□□□□ -1.962e-6■□□□□ 8.2
TOP2A-201ENST00000423485 OR2H2O95918 312 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 SURF2Q15527 256 aaPredicted RBP2.83□□□□□ -1.96
TOP2A-201ENST00000423485 HLA-DRB5Q30154 266 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 ZNF493Q6ZR52 646 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 GGNQ86UU5 652 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 MAFIPQ8WZ33 124 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 TMEM126AQ9H061 195 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 FAM212BQ9NTI7 297 aaPredicted RBP2.83□□□□□ -1.96
TOP2A-201ENST00000423485 SLC25A37Q9NYZ2 338 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 TNFSF18Q9UNG2 199 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 VPS13DQ5THJ4 4388 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 RAI1Q7Z5J4 1906 aaPredicted RBP2.83□□□□□ -1.96
TOP2A-201ENST00000423485 TRBV20-1A0A075B6N2 111 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 IGKV2D-26A0A0A0MRZ7 120 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 ZNF727A8MUV8 499 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 BUB1B-PAK6H3BSN5 160 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 CD3DP04234 171 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 CRYGDP07320 174 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 RND2P52198 227 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 CX3CL1P78423 397 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 H3F3AP84243 136 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 C15orf32Q32M92 178 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 C19orf35Q6ZS72 473 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 THAP8Q8NA92 274 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 GPR32P1Q8NGA4 272 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 OR11H4Q8NGC9 324 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 OR4X1Q8NH49 305 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 MGLLQ99685 303 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 C20orf144Q9BQM9 153 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 PGPEP1Q9NXJ5 209 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 FN1P02751 2386 aaKnown RBP2.83□□□□□ -1.96
TOP2A-201ENST00000423485 TRAV34A0A0B4J273 112 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 KIR2DL5BA0A0G2JN68 375 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 KIR2DL5BA0A0G2JPC4 375 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 MSGN1A6NI15 193 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 PLA2G10O15496 165 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 CD55P08174 381 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 TRGC1P0CF51 173 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 ESDP10768 282 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 ALOX5APP20292 161 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 RAB3BP20337 219 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 HLA-DRB3P79483 266 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 FABP5Q01469 135 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 NEGR1Q7Z3B1 354 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 LRP11Q86VZ4 500 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 KIR2DL5AQ8N109 375 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 TOMM5Q8N4H5 51 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 DNAJC15Q9Y5T4 150 aa2.83□□□□□ -1.96
TOP2A-201ENST00000423485 KANTRA0A1W2PQU2 76 aa2.82□□□□□ -1.96
TOP2A-201ENST00000423485 RAB6AP20340 208 aa2.82□□□□□ -1.96
TOP2A-201ENST00000423485 CD34P28906 385 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms