RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 IFNA21P01568 189 aa8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 GATA2P23769 480 aaPredicted RBP8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 RAP2BP61225 183 aa8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 POLR2GP62487 172 aaKnown RBP eCLIP8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 ID3Q02535 119 aa8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 AMTNQ6UX39 209 aa8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 CYP2G1PQ6ZSU1 146 aa8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 S100A7AQ86SG5 101 aa8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 C1orf158Q8N1D5 194 aa8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 IGF2BP2-AS1Q96M15 143 aa8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 SHANK2-AS3Q9BTD1 123 aa8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 TMEM208Q9BTX3 173 aa8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 RBM38Q9H0Z9 239 aaKnown RBP8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 HIGD1AQ9Y241 93 aa8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 YTHDF2Q9Y5A9 579 aaKnown RBP8.24□□□□□ -1.09
SQSTM1-203ENST00000422245 SSSCA1O60232 199 aa8.23□□□□□ -1.09
SQSTM1-203ENST00000422245 INSP01308 110 aa8.23□□□□□ -1.09
SQSTM1-203ENST00000422245 IL5P05113 134 aa8.23□□□□□ -1.09
SQSTM1-203ENST00000422245 RPL7P18124 248 aaKnown RBP8.23□□□□□ -1.09
SQSTM1-203ENST00000422245 CNN1P51911 297 aaKnown RBP8.23□□□□□ -1.09
SQSTM1-203ENST00000422245 SELENOTP62341 195 aa8.23□□□□□ -1.09
SQSTM1-203ENST00000422245 GSG1LQ6UXU4 331 aa8.23□□□□□ -1.09
SQSTM1-203ENST00000422245 TMEM182Q6ZP80 229 aaPredicted RBP8.23□□□□□ -1.09
SQSTM1-203ENST00000422245 C17orf77Q96MU5 243 aa8.23□□□□□ -1.09
SQSTM1-203ENST00000422245 SLC25A39Q9BZJ4 359 aaPredicted RBP8.23□□□□□ -1.09
SQSTM1-203ENST00000422245 PSENENQ9NZ42 101 aa8.23□□□□□ -1.09
SQSTM1-203ENST00000422245 KIAA1109Q2LD37 5005 aa8.23□□□□□ -1.09
SQSTM1-203ENST00000422245 TRAV8-2A0A0B4J237 113 aa8.22□□□□□ -1.09
SQSTM1-203ENST00000422245 FNDC10F2Z333 226 aa8.22□□□□□ -1.09
SQSTM1-203ENST00000422245 HYPMO75409 117 aa8.22□□□□□ -1.09
SQSTM1-203ENST00000422245 OR4E1P0C645 316 aa8.22□□□□□ -1.09
SQSTM1-203ENST00000422245 LINC00869P0C866 280 aa8.22□□□□□ -1.09
SQSTM1-203ENST00000422245 PLP1P60201 277 aa8.22□□□□□ -1.09
SQSTM1-203ENST00000422245 DAD1P61803 113 aa8.22□□□□□ -1.09
SQSTM1-203ENST00000422245 DLK1P80370 383 aa8.22□□□□□ -1.09
SQSTM1-203ENST00000422245 UBE2DNLQ8IWF7 75 aa8.22□□□□□ -1.09
SQSTM1-203ENST00000422245 ZNF738Q8NE65 137 aa8.22□□□□□ -1.09
SQSTM1-203ENST00000422245 OR11H7Q8NGC8 314 aa8.22□□□□□ -1.09
SQSTM1-203ENST00000422245 SMIM8Q96KF7 97 aa8.22□□□□□ -1.09
SQSTM1-203ENST00000422245 RNF24Q9Y225 148 aa8.22□□□□□ -1.09
SQSTM1-203ENST00000422245 PMS2P5A8MQ11 134 aa8.21□□□□□ -1.1
SQSTM1-203ENST00000422245 CENPXA8MT69 81 aa8.21□□□□□ -1.1
SQSTM1-203ENST00000422245 K7EPK0 472 aa8.21□□□□□ -1.1
SQSTM1-203ENST00000422245 HTN3P15516 51 aa8.21□□□□□ -1.1
SQSTM1-203ENST00000422245 B2MP61769 119 aa8.21□□□□□ -1.1
SQSTM1-203ENST00000422245 FGL1Q08830 312 aa8.21□□□□□ -1.1
SQSTM1-203ENST00000422245 BAK1Q16611 211 aa8.21□□□□□ -1.1
SQSTM1-203ENST00000422245 SPINK13Q1W4C9 94 aa8.21□□□□□ -1.1
SQSTM1-203ENST00000422245 LGALS9BQ3B8N2 356 aa8.21□□□□□ -1.1
SQSTM1-203ENST00000422245 C4orf46Q504U0 113 aa8.21□□□□□ -1.1
SQSTM1-203ENST00000422245 TMEM14EPQ6UXP3 125 aa8.21□□□□□ -1.1
SQSTM1-203ENST00000422245 RNF182Q8N6D2 247 aa8.21□□□□□ -1.1
SQSTM1-203ENST00000422245 MGAT4CQ9UBM8 478 aa8.21□□□□□ -1.1
SQSTM1-203ENST00000422245 FLVCR2Q9UPI3 526 aa8.21□□□□□ -1.1
SQSTM1-203ENST00000422245 A0A087X0K7 114 aa8.2□□□□□ -1.1
SQSTM1-203ENST00000422245 LYRM9A8MSI8 78 aa8.2□□□□□ -1.1
SQSTM1-203ENST00000422245 BOLA2-SMG1P6H3BVE0 249 aa8.2□□□□□ -1.1
SQSTM1-203ENST00000422245 M0R2Z0 102 aa8.2□□□□□ -1.1
SQSTM1-203ENST00000422245 TSC22D2O75157 780 aa8.2□□□□□ -1.1
SQSTM1-203ENST00000422245 OR5G3P0C626 314 aa8.2□□□□□ -1.1
SQSTM1-203ENST00000422245 TSPOP30536 169 aa8.2□□□□□ -1.1
SQSTM1-203ENST00000422245 TAS2R30P59541 319 aa8.2□□□□□ -1.1
SQSTM1-203ENST00000422245 RRAS2P62070 204 aaPredicted RBP8.2□□□□□ -1.1
SQSTM1-203ENST00000422245 IAH1Q2TAA2 248 aaPredicted RBP8.2□□□□□ -1.1
SQSTM1-203ENST00000422245 CNPY1Q3B7I2 92 aa8.2□□□□□ -1.1
SQSTM1-203ENST00000422245 RNF212Q495C1 297 aa8.2□□□□□ -1.1
SQSTM1-203ENST00000422245 PXDC1Q5TGL8 231 aa8.2□□□□□ -1.1
SQSTM1-203ENST00000422245 ZNF546Q86UE3 836 aa8.2□□□□□ -1.1
SQSTM1-203ENST00000422245 OR10P1Q8NGE3 313 aa8.2□□□□□ -1.1
SQSTM1-203ENST00000422245 A0A1B0GVY2 172 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 CRXO43186 299 aaPredicted RBP8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 CCNKO75909 580 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 SCGB1D2O95969 90 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 METTL15P1P0C7V9 234 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 CXCL2P19875 107 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 CXCL3P19876 107 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 ANXA7P20073 488 aaKnown RBP8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 BTCP35070 178 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 HIST1H1AQ02539 215 aaPredicted RBP8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 IGFL4Q6B9Z1 124 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 TMEM88Q6PEY1 159 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 TEPPQ6URK8 271 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 BAP18Q8IXM2 172 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 C15orf53Q8NAA6 179 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 ZBTB8BQ8NAP8 495 aaPredicted RBP8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 LRRC20Q8TCA0 184 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 MITD1Q8WV92 249 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 UHRF2Q96PU4 802 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 GGACTQ9BVM4 153 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 NPVFQ9HCQ7 196 aa8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 RCL1Q9Y2P8 373 aaKnown RBP8.19□□□□□ -1.1
SQSTM1-203ENST00000422245 LINC00854A0A1B0GVQ3 168 aa8.18□□□□□ -1.1
SQSTM1-203ENST00000422245 PRSS29PA6NIE9 313 aa8.18□□□□□ -1.1
SQSTM1-203ENST00000422245 M0R2N4 97 aa8.18□□□□□ -1.1
SQSTM1-203ENST00000422245 RTL8CO15255 209 aa8.18□□□□□ -1.1
SQSTM1-203ENST00000422245 FAM3BP58499 235 aaPredicted RBP8.18□□□□□ -1.1
SQSTM1-203ENST00000422245 SLC38A11Q08AI6 406 aa8.18□□□□□ -1.1
SQSTM1-203ENST00000422245 LCN15Q6UWW0 184 aa8.18□□□□□ -1.1
SQSTM1-203ENST00000422245 TMEM256Q8N2U0 113 aa8.18□□□□□ -1.1
SQSTM1-203ENST00000422245 OR8A1Q8NGG7 326 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms