RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 DNAJC4Q9NNZ3 241 aa11.7□□□□□ -0.54
BRAT1-202ENST00000421712 PXMP4Q9Y6I8 212 aa11.7□□□□□ -0.54
BRAT1-202ENST00000421712 FXYD6-FXYD2A0A087WZ82 144 aa11.69□□□□□ -0.54
BRAT1-202ENST00000421712 ATF4P18848 351 aaPredicted RBP11.69□□□□□ -0.54
BRAT1-202ENST00000421712 ID1P41134 155 aa11.69□□□□□ -0.54
BRAT1-202ENST00000421712 PRR20EP86478 221 aa11.69□□□□□ -0.54
BRAT1-202ENST00000421712 PRR20CP86479 221 aa11.69□□□□□ -0.54
BRAT1-202ENST00000421712 PRR20DP86480 221 aa11.69□□□□□ -0.54
BRAT1-202ENST00000421712 PRR20BP86481 221 aa11.69□□□□□ -0.54
BRAT1-202ENST00000421712 PRR20AP86496 221 aa11.69□□□□□ -0.54
BRAT1-202ENST00000421712 PSMG4Q5JS54 123 aa11.69□□□□□ -0.54
BRAT1-202ENST00000421712 INO80EQ8NBZ0 244 aaPredicted RBP11.69□□□□□ -0.54
BRAT1-202ENST00000421712 LINC00052Q96N35 136 aa11.69□□□□□ -0.54
BRAT1-202ENST00000421712 WDR61Q9GZS3 305 aaKnown RBP11.69□□□□□ -0.54
BRAT1-202ENST00000421712 C17orf112F2Z3M2 114 aa11.68□□□□□ -0.54
BRAT1-202ENST00000421712 RPL7P18124 248 aaKnown RBP11.68□□□□□ -0.54
BRAT1-202ENST00000421712 LINC00322Q6ZN03 302 aaPredicted RBP11.68□□□□□ -0.54
BRAT1-202ENST00000421712 STHQ8IWL8 128 aa11.68□□□□□ -0.54
BRAT1-202ENST00000421712 CHAC2Q8WUX2 184 aa11.68□□□□□ -0.54
BRAT1-202ENST00000421712 TMEM37Q8WXS4 190 aa11.68□□□□□ -0.54
BRAT1-202ENST00000421712 C16orf92Q96LL3 132 aa11.68□□□□□ -0.54
BRAT1-202ENST00000421712 PFDN5Q99471 154 aa11.68□□□□□ -0.54
BRAT1-202ENST00000421712 KCNIP2Q9NS61 270 aa11.68□□□□□ -0.54
BRAT1-202ENST00000421712 MEOX2P50222 304 aa11.67□□□□□ -0.54
BRAT1-202ENST00000421712 APOC4P55056 127 aa11.67□□□□□ -0.54
BRAT1-202ENST00000421712 LRRC20Q8TCA0 184 aa11.67□□□□□ -0.54
BRAT1-202ENST00000421712 U3KQK5 164 aa11.67□□□□□ -0.54
BRAT1-202ENST00000421712 KNCNA6PVL3 124 aa11.66□□□□□ -0.54
BRAT1-202ENST00000421712 ACTL10Q5JWF8 245 aa11.66□□□□□ -0.54
BRAT1-202ENST00000421712 SAMD13Q5VXD3 122 aa11.66□□□□□ -0.54
BRAT1-202ENST00000421712 AQP10Q96PS8 301 aa11.66□□□□□ -0.54
BRAT1-202ENST00000421712 SPATA25Q9BR10 227 aa11.66□□□□□ -0.54
BRAT1-202ENST00000421712 WFDC1Q9HC57 220 aa11.66□□□□□ -0.54
BRAT1-202ENST00000421712 SEPSECSQ9HD40 501 aaKnown RBP11.66□□□□□ -0.54
BRAT1-202ENST00000421712 PSMB3P49720 205 aa11.65□□□□□ -0.54
BRAT1-202ENST00000421712 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.65□□□□□ -0.54
BRAT1-202ENST00000421712 BPIFA4PQ86YQ2 179 aa11.65□□□□□ -0.54
BRAT1-202ENST00000421712 GATAD1Q8WUU5 269 aa11.65□□□□□ -0.54
BRAT1-202ENST00000421712 RCHY1Q96PM5 261 aa11.65□□□□□ -0.54
BRAT1-202ENST00000421712 TM2D3Q9BRN9 247 aa11.65□□□□□ -0.54
BRAT1-202ENST00000421712 TGP01266 2768 aa11.65□□□□□ -0.54
BRAT1-202ENST00000421712 TRAV5A0A0B4J249 113 aa11.64□□□□□ -0.55
BRAT1-202ENST00000421712 SMLR1H3BR10 107 aa11.64□□□□□ -0.55
BRAT1-202ENST00000421712 ISLRO14498 428 aa11.64□□□□□ -0.55
BRAT1-202ENST00000421712 ZNF266Q14584 549 aa11.64□□□□□ -0.55
BRAT1-202ENST00000421712 FFAR4Q5NUL3 377 aa11.64□□□□□ -0.55
BRAT1-202ENST00000421712 FAM78BQ5VT40 261 aa11.64□□□□□ -0.55
BRAT1-202ENST00000421712 MORN5Q5VZ52 161 aa11.64□□□□□ -0.55
BRAT1-202ENST00000421712 RETNQ9HD89 108 aa11.64□□□□□ -0.55
BRAT1-202ENST00000421712 SNRPCP09234 159 aaKnown RBP11.63□□□□□ -0.55
BRAT1-202ENST00000421712 GCSAMLQ5JQS6 135 aa11.63□□□□□ -0.55
BRAT1-202ENST00000421712 IGFL4Q6B9Z1 124 aa11.63□□□□□ -0.55
BRAT1-202ENST00000421712 CSTL1Q9H114 145 aa11.63□□□□□ -0.55
BRAT1-202ENST00000421712 TNFSF18Q9UNG2 199 aa11.63□□□□□ -0.55
BRAT1-202ENST00000421712 DNAH9Q9NYC9 4486 aa11.62□□□□□ -0.55
BRAT1-202ENST00000421712 KIR2DL5BA0A0G2JN68 375 aa11.62□□□□□ -0.55
BRAT1-202ENST00000421712 KIR2DL5BA0A0G2JPC4 375 aa11.62□□□□□ -0.55
BRAT1-202ENST00000421712 UBE2CO00762 179 aa11.62□□□□□ -0.55
BRAT1-202ENST00000421712 SOCS3O14543 225 aa11.62□□□□□ -0.55
BRAT1-202ENST00000421712 ARPC5O15511 151 aa11.62□□□□□ -0.55
BRAT1-202ENST00000421712 KIR2DL5AQ8N109 375 aa11.62□□□□□ -0.55
BRAT1-202ENST00000421712 KIR2DL5BQ8NHK3 375 aa11.62□□□□□ -0.55
BRAT1-202ENST00000421712 PARD6GQ9BYG4 376 aaPredicted RBP11.62□□□□□ -0.55
BRAT1-202ENST00000421712 RPRMQ9NS64 109 aa11.62□□□□□ -0.55
BRAT1-202ENST00000421712 AGRNO00468 2067 aa11.61□□□□□ -0.55
BRAT1-202ENST00000421712 A0A087X0K7 114 aa11.61□□□□□ -0.55
BRAT1-202ENST00000421712 BORCS7-ASMTA0A0B4J1R7 106 aa11.61□□□□□ -0.55
BRAT1-202ENST00000421712 EBLN2Q6P2I7 272 aa11.61□□□□□ -0.55
BRAT1-202ENST00000421712 HSD17B11Q8NBQ5 300 aa11.61□□□□□ -0.55
BRAT1-202ENST00000421712 hCG_2014768A0A024R1R8 64 aa11.6□□□□□ -0.55
BRAT1-202ENST00000421712 RNF222A6NCQ9 220 aa11.6□□□□□ -0.55
BRAT1-202ENST00000421712 G3V3Q6 166 aa11.6□□□□□ -0.55
BRAT1-202ENST00000421712 H3BTX0 84 aa11.6□□□□□ -0.55
BRAT1-202ENST00000421712 CA1P00915 261 aaPredicted RBP11.6□□□□□ -0.55
BRAT1-202ENST00000421712 IGKV3-20P01619 116 aa11.6□□□□□ -0.55
BRAT1-202ENST00000421712 DEFB1P60022 68 aa11.6□□□□□ -0.55
BRAT1-202ENST00000421712 DEFB135Q30KP9 77 aa11.6□□□□□ -0.55
BRAT1-202ENST00000421712 Q6ZNX1 250 aa11.6□□□□□ -0.55
BRAT1-202ENST00000421712 MIR17HGQ75NE6 70 aa11.6□□□□□ -0.55
BRAT1-202ENST00000421712 RNF182Q8N6D2 247 aa11.6□□□□□ -0.55
BRAT1-202ENST00000421712 C20orf173Q96LM9 149 aa11.6□□□□□ -0.55
BRAT1-202ENST00000421712 C17orf77Q96MU5 243 aa11.6□□□□□ -0.55
BRAT1-202ENST00000421712 MFFQ9GZY8 342 aa11.6□□□□□ -0.55
BRAT1-202ENST00000421712 RFNGQ9Y644 331 aa11.6□□□□□ -0.55
BRAT1-202ENST00000421712 MRPS12O15235 138 aaKnown RBP11.59□□□□□ -0.55
BRAT1-202ENST00000421712 ACOT6Q3I5F7 207 aaPredicted RBP11.59□□□□□ -0.55
BRAT1-202ENST00000421712 SPATA31B1PQ5VZV4 182 aa11.59□□□□□ -0.55
BRAT1-202ENST00000421712 LCN15Q6UWW0 184 aa11.59□□□□□ -0.55
BRAT1-202ENST00000421712 Q6ZWC4 215 aa11.59□□□□□ -0.55
BRAT1-202ENST00000421712 TRPT1Q86TN4 253 aaKnown RBP11.59□□□□□ -0.55
BRAT1-202ENST00000421712 ZNF738Q8NE65 137 aa11.59□□□□□ -0.55
BRAT1-202ENST00000421712 OR4B1Q8NGF8 309 aa11.59□□□□□ -0.55
BRAT1-202ENST00000421712 MRPL32Q9BYC8 188 aaKnown RBP11.59□□□□□ -0.55
BRAT1-202ENST00000421712 HRH4Q9H3N8 390 aa11.59□□□□□ -0.55
BRAT1-202ENST00000421712 TRAV8-2A0A0B4J237 113 aa11.58□□□□□ -0.56
BRAT1-202ENST00000421712 A0A1W2PPV4 95 aa11.58□□□□□ -0.56
BRAT1-202ENST00000421712 F6UB75 175 aa11.58□□□□□ -0.56
BRAT1-202ENST00000421712 H3BMM0 161 aa11.58□□□□□ -0.56
BRAT1-202ENST00000421712 SPRY2O43597 315 aa11.58□□□□□ -0.56
BRAT1-202ENST00000421712 SPP1P10451 314 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms