RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 OR10G7Q8NGN6 311 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 RPRMQ9NS64 109 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 TECRQ9NZ01 308 aaKnown RBP11.84□□□□□ -0.51
DDX55-203ENST00000421670 PLA2G2EQ9NZK7 142 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 SORL1Q92673 2214 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 RPL11P62913 178 aaKnown RBP11.84□□□□□ -0.51
DDX55-203ENST00000421670 TMEM41BQ5BJD5 291 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 AKR1C8PQ5T2L2 129 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 SIGLEC15Q6ZMC9 328 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 S100A7AQ86SG5 101 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 RPP25LQ8N5L8 163 aaKnown RBP11.84□□□□□ -0.51
DDX55-203ENST00000421670 FUT9Q9Y231 359 aa11.84□□□□□ -0.51
DDX55-203ENST00000421670 MBP02144 154 aa11.83□□□□□ -0.52
DDX55-203ENST00000421670 S100A7P31151 101 aa11.83□□□□□ -0.52
DDX55-203ENST00000421670 RHOBP62745 196 aa11.83□□□□□ -0.52
DDX55-203ENST00000421670 C1orf194Q5T5A4 169 aa11.83□□□□□ -0.52
DDX55-203ENST00000421670 FAM90A2PQ658T7 463 aa11.83□□□□□ -0.52
DDX55-203ENST00000421670 MRPL32Q9BYC8 188 aaKnown RBP11.83□□□□□ -0.52
DDX55-203ENST00000421670 HMGB3O15347 200 aaKnown RBP11.82□□□□□ -0.52
DDX55-203ENST00000421670 WIPF1O43516 503 aa11.82□□□□□ -0.52
DDX55-203ENST00000421670 FHITP49789 147 aa11.82□□□□□ -0.52
DDX55-203ENST00000421670 RBPMS2Q6ZRY4 209 aaKnown RBP11.82□□□□□ -0.52
DDX55-203ENST00000421670 SSX7Q7RTT5 188 aa11.82□□□□□ -0.52
DDX55-203ENST00000421670 GBGT1Q8N5D6 347 aa11.82□□□□□ -0.52
DDX55-203ENST00000421670 SLC25A2Q9BXI2 301 aa11.82□□□□□ -0.52
DDX55-203ENST00000421670 GPR61Q9BZJ8 451 aa11.82□□□□□ -0.52
DDX55-203ENST00000421670 A0A1W2PPV4 95 aa11.81□□□□□ -0.52
DDX55-203ENST00000421670 SNRPCP09234 159 aaKnown RBP11.81□□□□□ -0.52
DDX55-203ENST00000421670 TFPI2P48307 235 aa11.81□□□□□ -0.52
DDX55-203ENST00000421670 CDC34P49427 236 aaPredicted RBP11.81□□□□□ -0.52
DDX55-203ENST00000421670 FAM74A1Q5RGS3 127 aa11.81□□□□□ -0.52
DDX55-203ENST00000421670 SAMD5Q5TGI4 173 aa11.81□□□□□ -0.52
DDX55-203ENST00000421670 LCN12Q6JVE5 192 aa11.81□□□□□ -0.52
DDX55-203ENST00000421670 ALKAL2Q6UX46 152 aa11.81□□□□□ -0.52
DDX55-203ENST00000421670 STXBP6Q8NFX7 210 aa11.81□□□□□ -0.52
DDX55-203ENST00000421670 FAM167A-AS1Q96KT0 104 aa11.81□□□□□ -0.52
DDX55-203ENST00000421670 SMAD5-AS1Q9Y6J3 95 aa11.81□□□□□ -0.52
DDX55-203ENST00000421670 HELTA6NFD8 242 aa11.8□□□□□ -0.52
DDX55-203ENST00000421670 MRPS12O15235 138 aaKnown RBP11.8□□□□□ -0.52
DDX55-203ENST00000421670 PYYP10082 97 aa11.8□□□□□ -0.52
DDX55-203ENST00000421670 GP9P14770 177 aa11.8□□□□□ -0.52
DDX55-203ENST00000421670 RPL7P18124 248 aaKnown RBP11.8□□□□□ -0.52
DDX55-203ENST00000421670 ZNF726P1Q15940 193 aa11.8□□□□□ -0.52
DDX55-203ENST00000421670 GUCA2BQ16661 112 aa11.8□□□□□ -0.52
DDX55-203ENST00000421670 EIF5AL1Q6IS14 154 aaKnown RBP11.8□□□□□ -0.52
DDX55-203ENST00000421670 BPIFA4PQ86YQ2 179 aa11.8□□□□□ -0.52
DDX55-203ENST00000421670 TSPAN4O14817 238 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 OR7C2O60412 319 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 GALR1P47211 349 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 OR2K2Q8NGT1 345 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 RAB24Q969Q5 203 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 GPR82Q96P67 336 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 ACTR3CQ9C0K3 210 aaPredicted RBP11.79□□□□□ -0.52
DDX55-203ENST00000421670 MS4A6AQ9H2W1 248 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 RNF24Q9Y225 148 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 TRAV25A0A0B4J276 109 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 UMAD1C9J7I0 102 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 H3BTX0 84 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 CD5P06127 495 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 ATF4P18848 351 aaPredicted RBP11.79□□□□□ -0.52
DDX55-203ENST00000421670 KHDC3LQ587J8 217 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 WFDC3Q8IUB2 231 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 FAM213BQ8TBF2 198 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 ZNF503Q96F45 646 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 C17orf77Q96MU5 243 aa11.79□□□□□ -0.52
DDX55-203ENST00000421670 ZNF785A8K8V0 405 aa11.78□□□□□ -0.52
DDX55-203ENST00000421670 OR10J4P0C629 311 aa11.78□□□□□ -0.52
DDX55-203ENST00000421670 TAS2R45P59539 299 aa11.78□□□□□ -0.52
DDX55-203ENST00000421670 KRTAP10-11P60412 298 aa11.78□□□□□ -0.52
DDX55-203ENST00000421670 PHYHIPLQ96FC7 376 aa11.78□□□□□ -0.52
DDX55-203ENST00000421670 SPAG8Q99932 426 aaPredicted RBP11.78□□□□□ -0.52
DDX55-203ENST00000421670 NRN1Q9NPD7 142 aa11.78□□□□□ -0.52
DDX55-203ENST00000421670 CTXND1A0A1B0GTU2 59 aa11.77□□□□□ -0.53
DDX55-203ENST00000421670 H3BQ15 152 aa11.77□□□□□ -0.53
DDX55-203ENST00000421670 DNASE2O00115 360 aaPredicted RBP11.77□□□□□ -0.53
DDX55-203ENST00000421670 STAG3L2P0CL84 134 aa11.77□□□□□ -0.53
DDX55-203ENST00000421670 STAG3L3P0CL85 134 aa11.77□□□□□ -0.53
DDX55-203ENST00000421670 ARL14EPLP0DKL9 152 aa11.77□□□□□ -0.53
DDX55-203ENST00000421670 IGLC2P0DOY2 106 aa11.77□□□□□ -0.53
DDX55-203ENST00000421670 SULT1A2P50226 295 aa11.77□□□□□ -0.53
DDX55-203ENST00000421670 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.77□□□□□ -0.53
DDX55-203ENST00000421670 DCANP1Q8TF63 244 aa11.77□□□□□ -0.53
DDX55-203ENST00000421670 PAXXQ9BUH6 204 aa11.77□□□□□ -0.53
DDX55-203ENST00000421670 OR51M1Q9H341 326 aa11.77□□□□□ -0.53
DDX55-203ENST00000421670 ZNF256Q9Y2P7 627 aaPredicted RBP11.77□□□□□ -0.53
DDX55-203ENST00000421670 FGF8P55075 233 aaPredicted RBP11.76□□□□□ -0.53
DDX55-203ENST00000421670 UBE2L3P68036 154 aaKnown RBP11.76□□□□□ -0.53
DDX55-203ENST00000421670 PAFAH1B2P68402 229 aa11.76□□□□□ -0.53
DDX55-203ENST00000421670 EGFEM1PQ0D2K5 195 aa11.76□□□□□ -0.53
DDX55-203ENST00000421670 LCN15Q6UWW0 184 aa11.76□□□□□ -0.53
DDX55-203ENST00000421670 FAM24BQ8N5W8 94 aa11.76□□□□□ -0.53
DDX55-203ENST00000421670 TMEM14CQ9P0S9 112 aa11.76□□□□□ -0.53
DDX55-203ENST00000421670 A0A087X0K7 114 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 MAP1LC3B2A6NCE7 125 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 SLC17A3O00476 420 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 BLNKQ8WV28 456 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 FXYD5Q96DB9 178 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 PRR25Q96S07 402 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 MAP1LC3BQ9GZQ8 125 aa11.75□□□□□ -0.53
DDX55-203ENST00000421670 HRH4Q9H3N8 390 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms