RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 G3V4G9 280 aa13.3□□□□□ -0.28
PKP4-204ENST00000421462 SMKR1H3BMG3 65 aa13.3□□□□□ -0.28
PKP4-204ENST00000421462 GTSF1LQ9H1H1 148 aa13.3□□□□□ -0.28
PKP4-204ENST00000421462 D6R8Y8 96 aa13.3□□□□□ -0.28
PKP4-204ENST00000421462 GCSHP23434 173 aa13.3□□□□□ -0.28
PKP4-204ENST00000421462 DHRS13Q6UX07 377 aa13.3□□□□□ -0.28
PKP4-204ENST00000421462 Q86TA4 180 aa13.3□□□□□ -0.28
PKP4-204ENST00000421462 OSR1Q8TAX0 266 aaPredicted RBP13.3□□□□□ -0.28
PKP4-204ENST00000421462 FER1L6-AS2Q96M78 137 aa13.3□□□□□ -0.28
PKP4-204ENST00000421462 KLF12Q9Y4X4 402 aa13.3□□□□□ -0.28
PKP4-204ENST00000421462 LAMTOR5O43504 91 aa13.29□□□□□ -0.28
PKP4-204ENST00000421462 TMEM213A2RRL7 107 aa13.29□□□□□ -0.28
PKP4-204ENST00000421462 RBP4P02753 201 aa13.29□□□□□ -0.28
PKP4-204ENST00000421462 TNFRSF1AP19438 455 aa13.29□□□□□ -0.28
PKP4-204ENST00000421462 STXBP6Q8NFX7 210 aa13.29□□□□□ -0.28
PKP4-204ENST00000421462 TMEM186Q96B77 213 aa13.29□□□□□ -0.28
PKP4-204ENST00000421462 SPOCK3Q9BQ16 436 aa13.29□□□□□ -0.28
PKP4-204ENST00000421462 JKAMPQ9P055 326 aa13.29□□□□□ -0.28
PKP4-204ENST00000421462 K7EP34 96 aa13.28□□□□□ -0.28
PKP4-204ENST00000421462 TIMM23BQ5SRD1 257 aa13.28□□□□□ -0.28
PKP4-204ENST00000421462 UFSP1Q6NVU6 142 aa13.28□□□□□ -0.28
PKP4-204ENST00000421462 AMN1Q8IY45 258 aa13.28□□□□□ -0.28
PKP4-204ENST00000421462 SOX21Q9Y651 276 aaPredicted RBP13.28□□□□□ -0.28
PKP4-204ENST00000421462 S4R3C0 116 aa13.28□□□□□ -0.28
PKP4-204ENST00000421462 SMAGPQ0VAQ4 97 aa13.28□□□□□ -0.28
PKP4-204ENST00000421462 SRSF6Q13247 344 aaKnown RBP13.28□□□□□ -0.28
PKP4-204ENST00000421462 OR5AN1Q8NGI8 311 aa13.28□□□□□ -0.28
PKP4-204ENST00000421462 PROCRQ9UNN8 238 aa13.28□□□□□ -0.28
PKP4-204ENST00000421462 K7ERJ3 54 aa13.28□□□□□ -0.28
PKP4-204ENST00000421462 RIGQ13278 110 aa13.28□□□□□ -0.28
PKP4-204ENST00000421462 OR4C13Q8NGP0 309 aa13.28□□□□□ -0.28
PKP4-204ENST00000421462 TNRC18O15417 2968 aaPredicted RBP13.27□□□□□ -0.28
PKP4-204ENST00000421462 H3BRM9 83 aa13.27□□□□□ -0.28
PKP4-204ENST00000421462 M0R3E3 92 aa13.27□□□□□ -0.28
PKP4-204ENST00000421462 LHBP01229 141 aa13.27□□□□□ -0.28
PKP4-204ENST00000421462 FGF6P10767 208 aa13.27□□□□□ -0.28
PKP4-204ENST00000421462 Q5PR19 223 aa13.27□□□□□ -0.28
PKP4-204ENST00000421462 PIP4P2Q8N4L2 257 aa13.27□□□□□ -0.28
PKP4-204ENST00000421462 SPRY4Q9C004 299 aa13.27□□□□□ -0.28
PKP4-204ENST00000421462 CACNA1HO95180 2353 aa13.27□□□□□ -0.29
PKP4-204ENST00000421462 MALRD1Q5VYJ5 2156 aa13.27□□□□□ -0.29
PKP4-204ENST00000421462 HAX1O00165 279 aa13.27□□□□□ -0.29
PKP4-204ENST00000421462 GP9P14770 177 aa13.27□□□□□ -0.29
PKP4-204ENST00000421462 CNTFRP26992 372 aa13.27□□□□□ -0.29
PKP4-204ENST00000421462 MTURNQ8N3F0 131 aa13.27□□□□□ -0.29
PKP4-204ENST00000421462 FAM222BQ8WU58 562 aa13.27□□□□□ -0.29
PKP4-204ENST00000421462 WT1P19544 449 aaPredicted RBP13.26□□□□□ -0.29
PKP4-204ENST00000421462 ZADH2Q8N4Q0 377 aa13.26□□□□□ -0.29
PKP4-204ENST00000421462 VSTM2AQ8TAG5 236 aa13.26□□□□□ -0.29
PKP4-204ENST00000421462 SIGLEC8Q9NYZ4 499 aa13.26□□□□□ -0.29
PKP4-204ENST00000421462 ATP5IP56385 69 aaPredicted RBP13.26□□□□□ -0.29
PKP4-204ENST00000421462 ZNF492Q9P255 531 aa13.26□□□□□ -0.29
PKP4-204ENST00000421462 DKK2Q9UBU2 259 aa13.26□□□□□ -0.29
PKP4-204ENST00000421462 HIGD1AQ9Y241 93 aa13.26□□□□□ -0.29
PKP4-204ENST00000421462 ZGRF1Q86YA3 2104 aa13.26□□□□□ -0.29
PKP4-204ENST00000421462 SMAD7O15105 426 aaKnown RBP13.26□□□□□ -0.29
PKP4-204ENST00000421462 IGLV1-44P01699 117 aa13.26□□□□□ -0.29
PKP4-204ENST00000421462 CT83Q5H943 113 aa13.26□□□□□ -0.29
PKP4-204ENST00000421462 SAMD13Q5VXD3 122 aa13.26□□□□□ -0.29
PKP4-204ENST00000421462 ZNF71Q9NQZ8 489 aaPredicted RBP13.26□□□□□ -0.29
PKP4-204ENST00000421462 TEX48A0A1B0GUV7 120 aa13.25□□□□□ -0.29
PKP4-204ENST00000421462 ZNF414Q96IQ9 312 aa13.25□□□□□ -0.29
PKP4-204ENST00000421462 ARRDC1-AS1Q9H2J1 176 aa13.25□□□□□ -0.29
PKP4-204ENST00000421462 MED13LQ71F56 2210 aa13.25□□□□□ -0.29
PKP4-204ENST00000421462 A0A096LNJ9 63 aa13.25□□□□□ -0.29
PKP4-204ENST00000421462 PRELID3AQ96N28 172 aa13.25□□□□□ -0.29
PKP4-204ENST00000421462 C8orf49Q96NF6 230 aa13.25□□□□□ -0.29
PKP4-204ENST00000421462 GFRA4Q9GZZ7 299 aa13.25□□□□□ -0.29
PKP4-204ENST00000421462 INSIG2Q9Y5U4 225 aa13.25□□□□□ -0.29
PKP4-204ENST00000421462 TECTAO75443 2155 aa13.24□□□□□ -0.29
PKP4-204ENST00000421462 IGHV1-46P01743 117 aa13.24□□□□□ -0.29
PKP4-204ENST00000421462 FABP2P12104 132 aa13.24□□□□□ -0.29
PKP4-204ENST00000421462 THAP8Q8NA92 274 aa13.24□□□□□ -0.29
PKP4-204ENST00000421462 TMEM167AQ8TBQ9 72 aa13.24□□□□□ -0.29
PKP4-204ENST00000421462 PPIAL4CA0A0B4J2A2 164 aa13.24□□□□□ -0.29
PKP4-204ENST00000421462 A0A1W2PPM0 123 aa13.24□□□□□ -0.29
PKP4-204ENST00000421462 PPIAL4GP0DN37 164 aa13.24□□□□□ -0.29
PKP4-204ENST00000421462 ZNF833PQ6ZTB9 187 aa13.24□□□□□ -0.29
PKP4-204ENST00000421462 NPFFR1Q9GZQ6 430 aa13.24□□□□□ -0.29
PKP4-204ENST00000421462 SLC25A15Q9Y619 301 aa13.24□□□□□ -0.29
PKP4-204ENST00000421462 NKX2-8O15522 239 aa13.24□□□□□ -0.29
PKP4-204ENST00000421462 SAMD5Q5TGI4 173 aa13.24□□□□□ -0.29
PKP4-204ENST00000421462 ZNF788Q6ZQV5 615 aa13.24□□□□□ -0.29
PKP4-204ENST00000421462 RPRMLQ8N4K4 120 aa13.24□□□□□ -0.29
PKP4-204ENST00000421462 FCGR2BP31994 310 aaPredicted RBP13.23□□□□□ -0.29
PKP4-204ENST00000421462 HSD52Q0P140 79 aa13.23□□□□□ -0.29
PKP4-204ENST00000421462 LYZL1Q6UWQ5 148 aa13.23□□□□□ -0.29
PKP4-204ENST00000421462 ZNF785A8K8V0 405 aa13.23□□□□□ -0.29
PKP4-204ENST00000421462 IGLV2-11P01706 119 aa13.23□□□□□ -0.29
PKP4-204ENST00000421462 VMA21Q3ZAQ7 101 aa13.23□□□□□ -0.29
PKP4-204ENST00000421462 FDCSPQ8NFU4 85 aa13.23□□□□□ -0.29
PKP4-204ENST00000421462 BOD1L2Q8IYS8 172 aa13.22□□□□□ -0.29
PKP4-204ENST00000421462 C8orf46Q8TAG6 207 aa13.22□□□□□ -0.29
PKP4-204ENST00000421462 CCL17Q92583 94 aa13.22□□□□□ -0.29
PKP4-204ENST00000421462 SLC25A39Q9BZJ4 359 aaPredicted RBP13.22□□□□□ -0.29
PKP4-204ENST00000421462 AGRNO00468 2067 aa13.22□□□□□ -0.29
PKP4-204ENST00000421462 CIDEAO60543 219 aa13.22□□□□□ -0.29
PKP4-204ENST00000421462 TMEM200BQ69YZ2 307 aa13.22□□□□□ -0.29
PKP4-204ENST00000421462 SPTBN2O15020 2390 aa13.22□□□□□ -0.29
PKP4-204ENST00000421462 FXYD2P54710 66 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms