RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 MORN5Q5VZ52 161 aa13.2□□□□□ -0.3
LINC00271-201ENST00000421378 STOML3Q8TAV4 291 aa13.2□□□□□ -0.3
LINC00271-201ENST00000421378 SPAG8Q99932 426 aaPredicted RBP13.2□□□□□ -0.3
LINC00271-201ENST00000421378 SEPSECSQ9HD40 501 aaKnown RBP13.2□□□□□ -0.3
LINC00271-201ENST00000421378 SPP1P10451 314 aa13.19□□□□□ -0.3
LINC00271-201ENST00000421378 GPR82Q96P67 336 aa13.19□□□□□ -0.3
LINC00271-201ENST00000421378 ZNF256Q9Y2P7 627 aaPredicted RBP13.19□□□□□ -0.3
LINC00271-201ENST00000421378 MBP02144 154 aa13.18□□□□□ -0.3
LINC00271-201ENST00000421378 RPL7P18124 248 aaKnown RBP13.18□□□□□ -0.3
LINC00271-201ENST00000421378 GALR1P47211 349 aa13.18□□□□□ -0.3
LINC00271-201ENST00000421378 RAB2AP61019 212 aa13.18□□□□□ -0.3
LINC00271-201ENST00000421378 BEAN1Q3B7T3 259 aa13.18□□□□□ -0.3
LINC00271-201ENST00000421378 KPRPQ5T749 579 aaPredicted RBP13.18□□□□□ -0.3
LINC00271-201ENST00000421378 BAP18Q8IXM2 172 aa13.18□□□□□ -0.3
LINC00271-201ENST00000421378 MRPL32Q9BYC8 188 aaKnown RBP13.18□□□□□ -0.3
LINC00271-201ENST00000421378 NBEAL1Q6ZS30 2694 aa13.18□□□□□ -0.3
LINC00271-201ENST00000421378 BOLA2-SMG1P6H3BVE0 249 aa13.17□□□□□ -0.3
LINC00271-201ENST00000421378 GP9P14770 177 aa13.17□□□□□ -0.3
LINC00271-201ENST00000421378 KRTAP10-11P60412 298 aa13.17□□□□□ -0.3
LINC00271-201ENST00000421378 RHOBP62745 196 aa13.17□□□□□ -0.3
LINC00271-201ENST00000421378 PAFAH1B2P68402 229 aa13.17□□□□□ -0.3
LINC00271-201ENST00000421378 SLC51BQ86UW2 128 aa13.17□□□□□ -0.3
LINC00271-201ENST00000421378 GBGT1Q8N5D6 347 aa13.17□□□□□ -0.3
LINC00271-201ENST00000421378 STXBP6Q8NFX7 210 aa13.17□□□□□ -0.3
LINC00271-201ENST00000421378 OR10G4Q8NGN3 311 aa13.17□□□□□ -0.3
LINC00271-201ENST00000421378 OR10G9Q8NGN4 311 aa13.17□□□□□ -0.3
LINC00271-201ENST00000421378 OR10G7Q8NGN6 311 aa13.17□□□□□ -0.3
LINC00271-201ENST00000421378 MS4A6AQ9H2W1 248 aa13.17□□□□□ -0.3
LINC00271-201ENST00000421378 FUT9Q9Y231 359 aa13.17□□□□□ -0.3
LINC00271-201ENST00000421378 NOTCH1P46531 2555 aa13.17□□□□□ -0.3
LINC00271-201ENST00000421378 ZNF785A8K8V0 405 aa13.16□□□□□ -0.3
LINC00271-201ENST00000421378 BPIFA4PQ86YQ2 179 aa13.16□□□□□ -0.3
LINC00271-201ENST00000421378 NRN1Q9NPD7 142 aa13.16□□□□□ -0.3
LINC00271-201ENST00000421378 SORL1Q92673 2214 aa13.16□□□□□ -0.3
LINC00271-201ENST00000421378 TRAV5A0A0B4J249 113 aa13.15□□□□□ -0.3
LINC00271-201ENST00000421378 OR4C46A6NHA9 309 aa13.15□□□□□ -0.3
LINC00271-201ENST00000421378 DNASE2O00115 360 aaPredicted RBP13.15□□□□□ -0.3
LINC00271-201ENST00000421378 SEC11BP0C7V7 166 aa13.15□□□□□ -0.3
LINC00271-201ENST00000421378 TFPI2P48307 235 aa13.15□□□□□ -0.3
LINC00271-201ENST00000421378 TMEM41BQ5BJD5 291 aa13.15□□□□□ -0.3
LINC00271-201ENST00000421378 AKR1C8PQ5T2L2 129 aa13.15□□□□□ -0.3
LINC00271-201ENST00000421378 SPATA31B1PQ5VZV4 182 aa13.15□□□□□ -0.3
LINC00271-201ENST00000421378 MIR17HGQ75NE6 70 aa13.15□□□□□ -0.3
LINC00271-201ENST00000421378 A0A1W2PPV4 95 aa13.15□□□□□ -0.3
LINC00271-201ENST00000421378 FAM122CQ6P4D5 195 aa13.15□□□□□ -0.3
LINC00271-201ENST00000421378 GTSCR1Q86UQ5 136 aa13.15□□□□□ -0.3
LINC00271-201ENST00000421378 RPP25LQ8N5L8 163 aaKnown RBP13.15□□□□□ -0.3
LINC00271-201ENST00000421378 TRAV2A0A0B4J234 112 aa13.14□□□□□ -0.31
LINC00271-201ENST00000421378 ATF4P18848 351 aaPredicted RBP13.14□□□□□ -0.31
LINC00271-201ENST00000421378 WFDC3Q8IUB2 231 aa13.14□□□□□ -0.31
LINC00271-201ENST00000421378 DCANP1Q8TF63 244 aa13.14□□□□□ -0.31
LINC00271-201ENST00000421378 TMED6Q8WW62 240 aa13.14□□□□□ -0.31
LINC00271-201ENST00000421378 PRR25Q96S07 402 aa13.14□□□□□ -0.31
LINC00271-201ENST00000421378 SLC25A2Q9BXI2 301 aa13.14□□□□□ -0.31
LINC00271-201ENST00000421378 RPRMQ9NS64 109 aa13.14□□□□□ -0.31
LINC00271-201ENST00000421378 BOLA1Q9Y3E2 137 aa13.14□□□□□ -0.31
LINC00271-201ENST00000421378 SMAD5-AS1Q9Y6J3 95 aa13.14□□□□□ -0.31
LINC00271-201ENST00000421378 MRPS12O15235 138 aaKnown RBP13.13□□□□□ -0.31
LINC00271-201ENST00000421378 CDC34P49427 236 aaPredicted RBP13.13□□□□□ -0.31
LINC00271-201ENST00000421378 TAS2R45P59539 299 aa13.13□□□□□ -0.31
LINC00271-201ENST00000421378 EIF5AL1Q6IS14 154 aaKnown RBP13.13□□□□□ -0.31
LINC00271-201ENST00000421378 MEOX2P50222 304 aa13.12□□□□□ -0.31
LINC00271-201ENST00000421378 CD81P60033 236 aa13.12□□□□□ -0.31
LINC00271-201ENST00000421378 KHDC3LQ587J8 217 aa13.12□□□□□ -0.31
LINC00271-201ENST00000421378 FAM167A-AS1Q96KT0 104 aa13.12□□□□□ -0.31
LINC00271-201ENST00000421378 TMEM14CQ9P0S9 112 aa13.12□□□□□ -0.31
LINC00271-201ENST00000421378 A0A087X0K7 114 aa13.11□□□□□ -0.31
LINC00271-201ENST00000421378 UMAD1C9J7I0 102 aa13.11□□□□□ -0.31
LINC00271-201ENST00000421378 K7EQG2 157 aa13.11□□□□□ -0.31
LINC00271-201ENST00000421378 OR7C2O60412 319 aa13.11□□□□□ -0.31
LINC00271-201ENST00000421378 IGLC2P0DOY2 106 aa13.11□□□□□ -0.31
LINC00271-201ENST00000421378 ACTR3CQ9C0K3 210 aaPredicted RBP13.11□□□□□ -0.31
LINC00271-201ENST00000421378 HRH4Q9H3N8 390 aa13.11□□□□□ -0.31
LINC00271-201ENST00000421378 EIF3GO75821 320 aaKnown RBP eCLIP13.11□□□□□ -0.31
LINC00271-201ENST00000421378 CD7P09564 240 aa13.11□□□□□ -0.31
LINC00271-201ENST00000421378 PYYP10082 97 aa13.11□□□□□ -0.31
LINC00271-201ENST00000421378 SAMD13Q5VXD3 122 aa13.11□□□□□ -0.31
LINC00271-201ENST00000421378 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.11□□□□□ -0.31
LINC00271-201ENST00000421378 RAB24Q969Q5 203 aa13.11□□□□□ -0.31
LINC00271-201ENST00000421378 C17orf77Q96MU5 243 aa13.11□□□□□ -0.31
LINC00271-201ENST00000421378 HMGB3O15347 200 aaKnown RBP13.1□□□□□ -0.31
LINC00271-201ENST00000421378 SNRPCP09234 159 aaKnown RBP13.1□□□□□ -0.31
LINC00271-201ENST00000421378 FAM24BQ8N5W8 94 aa13.1□□□□□ -0.31
LINC00271-201ENST00000421378 PAXXQ9BUH6 204 aa13.1□□□□□ -0.31
LINC00271-201ENST00000421378 OR51M1Q9H341 326 aa13.1□□□□□ -0.31
LINC00271-201ENST00000421378 AURKAIP1Q9NWT8 199 aaPredicted RBP13.1□□□□□ -0.31
LINC00271-201ENST00000421378 H3BQ15 152 aa13.09□□□□□ -0.31
LINC00271-201ENST00000421378 SOCS3O14543 225 aa13.09□□□□□ -0.31
LINC00271-201ENST00000421378 PRB2P02812 416 aaPredicted RBP13.09□□□□□ -0.31
LINC00271-201ENST00000421378 OR10J4P0C629 311 aa13.09□□□□□ -0.31
LINC00271-201ENST00000421378 SNRPD3P62318 126 aaKnown RBP13.09□□□□□ -0.31
LINC00271-201ENST00000421378 LCN15Q6UWW0 184 aa13.09□□□□□ -0.31
LINC00271-201ENST00000421378 PQLC2Q6ZP29 291 aa13.09□□□□□ -0.31
LINC00271-201ENST00000421378 PLA2G2EQ9NZK7 142 aa13.09□□□□□ -0.31
LINC00271-201ENST00000421378 CTXND1A0A1B0GTU2 59 aa13.08□□□□□ -0.32
LINC00271-201ENST00000421378 ISLRO14498 428 aa13.08□□□□□ -0.32
LINC00271-201ENST00000421378 ZNF688P0C7X2 276 aa13.08□□□□□ -0.32
LINC00271-201ENST00000421378 STAG3L2P0CL84 134 aa13.08□□□□□ -0.32
LINC00271-201ENST00000421378 STAG3L3P0CL85 134 aa13.08□□□□□ -0.32
LINC00271-201ENST00000421378 HIST1H1EP10412 219 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms