RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 PRNTQ86SH4 94 aa8.65□□□□□ -1.02
DDX56-203ENST00000421223 IGF2BP2-AS1Q96M15 143 aa8.65□□□□□ -1.02
DDX56-203ENST00000421223 ZNF331Q9NQX6 463 aaPredicted RBP8.65□□□□□ -1.02
DDX56-203ENST00000421223 Q71RC1 249 aaPredicted RBP8.65□□□□□ -1.02
DDX56-203ENST00000421223 ZNF664Q8N3J9 261 aa8.65□□□□□ -1.02
DDX56-203ENST00000421223 SAMD10Q9BYL1 202 aa8.65□□□□□ -1.02
DDX56-203ENST00000421223 OSTCQ9NRP0 149 aa8.65□□□□□ -1.02
DDX56-203ENST00000421223 LINC00527Q9UJ94 153 aa8.65□□□□□ -1.02
DDX56-203ENST00000421223 IGHV3OR16-13A0A075B7E8 117 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 IGHV3-74A0A0B4J1X5 117 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 A8MWP6 167 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 YPEL3P61236 119 aaPredicted RBP8.64□□□□□ -1.03
DDX56-203ENST00000421223 RNF151Q2KHN1 245 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 CCDC144NLQ6NUI1 221 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 TCF24Q7RTU0 167 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 TMEM219Q86XT9 240 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 MS4A10Q96PG2 267 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 TXN2Q99757 166 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 SSBP4Q9BWG4 385 aaPredicted RBP8.64□□□□□ -1.03
DDX56-203ENST00000421223 ZNF586Q9NXT0 402 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 ARL2-SNX15V9GYD0 113 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 ZNF705FA8MVS1 300 aaPredicted RBP8.64□□□□□ -1.03
DDX56-203ENST00000421223 SERF1AO75920 110 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 ZNF705DP0CH99 300 aaPredicted RBP8.64□□□□□ -1.03
DDX56-203ENST00000421223 ZNF705BP0CI00 300 aaPredicted RBP8.64□□□□□ -1.03
DDX56-203ENST00000421223 SAA4P35542 130 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 DAZAP1Q96EP5 407 aaKnown RBP8.64□□□□□ -1.03
DDX56-203ENST00000421223 RNF5Q99942 180 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 LY96Q9Y6Y9 160 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 M0R3E3 92 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 NDUFB8O95169 186 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 GP9P14770 177 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 RBX1P62877 108 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 RPL19P84098 196 aaKnown RBP8.64□□□□□ -1.03
DDX56-203ENST00000421223 BRD3OSQ6XYD6 125 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 CIARTQ8N365 385 aaPredicted RBP8.64□□□□□ -1.03
DDX56-203ENST00000421223 RNF125Q96EQ8 232 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 GNB4Q9HAV0 340 aa8.64□□□□□ -1.03
DDX56-203ENST00000421223 VPS13CQ709C8 3753 aa8.63□□□□□ -1.03
DDX56-203ENST00000421223 ZNF462Q96JM2 2506 aa8.63□□□□□ -1.03
DDX56-203ENST00000421223 ODF3BA8MYP8 253 aa8.63□□□□□ -1.03
DDX56-203ENST00000421223 AMY1AP04745 511 aa8.63□□□□□ -1.03
DDX56-203ENST00000421223 IGFL4Q6B9Z1 124 aa8.63□□□□□ -1.03
DDX56-203ENST00000421223 TPPP3Q9BW30 176 aa8.63□□□□□ -1.03
DDX56-203ENST00000421223 ZNF253O75346 499 aa8.63□□□□□ -1.03
DDX56-203ENST00000421223 SRIP30626 198 aa8.63□□□□□ -1.03
DDX56-203ENST00000421223 UNQ5815/PRO19632Q6UWF5 114 aa8.63□□□□□ -1.03
DDX56-203ENST00000421223 ZNF562Q6V9R5 426 aa8.63□□□□□ -1.03
DDX56-203ENST00000421223 C5orf17Q8NAS9 161 aa8.63□□□□□ -1.03
DDX56-203ENST00000421223 OR4F17Q8NGA8 305 aa8.63□□□□□ -1.03
DDX56-203ENST00000421223 OR2D3Q8NGH3 330 aa8.63□□□□□ -1.03
DDX56-203ENST00000421223 NOL4LQ96MY1 436 aaPredicted RBP8.63□□□□□ -1.03
DDX56-203ENST00000421223 TRAV9-1A0A075B6T8 112 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 IGHV3-66A0A0C4DH42 116 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 HIGD1CA8MV81 97 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 TCRAP04437 139 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 FAM106CPP0CH98 169 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 PMCHP20382 165 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 MFAP4P55083 255 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 LINC00322Q6ZN03 302 aaPredicted RBP8.62□□□□□ -1.03
DDX56-203ENST00000421223 BPIFA4PQ86YQ2 179 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 C21orf62Q9NYP8 219 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 IGHV3-49A0A0A0MS15 119 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 LINC01548A6NM66 108 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 NTF3P20783 257 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 ZNF491Q8N8L2 437 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 PGLYRP4Q96LB8 373 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 GPR82Q96P67 336 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 FANCD2OSQ96PS1 177 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 TBX15Q96SF7 602 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 HSPB9Q9BQS6 159 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 FBXL7Q9UJT9 491 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 IGHV2-70DA0A0C4DH43 119 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 G3V318 75 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 NUP35Q8NFH5 326 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 NPBQ8NG41 125 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 NRGNQ92686 78 aa8.62□□□□□ -1.03
DDX56-203ENST00000421223 DOPEY2Q9Y3R5 2298 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 EPG5Q9HCE0 2579 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 EREGO14944 169 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 NDUFA3O95167 84 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 P01737 135 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 IGHV4-39P01824 125 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 HIST1H1EP10412 219 aaKnown RBP8.61□□□□□ -1.03
DDX56-203ENST00000421223 LMO4P61968 165 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 SLAQ13239 276 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 IQCJQ1A5X6 159 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 TMEM183BQ1AE95 376 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 SIRPDQ9H106 197 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 TP53TG3Q9ULZ0 132 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 CELSR2Q9HCU4 2923 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 APCSP02743 223 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 COL8A1P27658 744 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 GPR183P32249 361 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 TMEM136Q6ZRR5 245 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 SMIM15Q7Z3B0 74 aa8.61□□□□□ -1.03
DDX56-203ENST00000421223 RNASE8Q8TDE3 154 aaKnown RBP8.61□□□□□ -1.03
DDX56-203ENST00000421223 DOPEY1Q5JWR5 2465 aa8.6□□□□□ -1.03
DDX56-203ENST00000421223 TMSB15BA0A087X1C1 80 aa8.6□□□□□ -1.03
DDX56-203ENST00000421223 IGHV7-81A0A0B4J1V7 117 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms