RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 TMED4Q7Z7H5 227 aa9.01□□□□□ -0.97
LINC00339-203ENST00000420503 C6orf223Q8N319 242 aa9.01□□□□□ -0.97
LINC00339-203ENST00000420503 CLUHP3Q96NS8 147 aa9.01□□□□□ -0.97
LINC00339-203ENST00000420503 MAGT1Q9H0U3 335 aa9.01□□□□□ -0.97
LINC00339-203ENST00000420503 LINC00588Q9Y4M8 146 aa9.01□□□□□ -0.97
LINC00339-203ENST00000420503 TRAV12-2A0A075B6T6 113 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 SULT1A3P0DMM9 295 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 SULT1A4P0DMN0 295 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 GATA2P23769 480 aaPredicted RBP9□□□□□ -0.97
LINC00339-203ENST00000420503 FUSP35637 526 aaKnown RBP eCLIP9□□□□□ -0.97
LINC00339-203ENST00000420503 ID1P41134 155 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 ASAH1Q13510 395 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 OR8G2PQ6IF36 304 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 LYZL2Q7Z4W2 148 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 SPATA12Q7Z6I5 190 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 LGI3Q8N145 548 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 Q8N1X5 172 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 RNF182Q8N6D2 247 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 DTD1Q8TEA8 209 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 IL22RA2Q969J5 263 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 ATG101Q9BSB4 218 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 DOK5Q9P104 306 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 FLVCR2Q9UPI3 526 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 KCNIP3Q9Y2W7 256 aa9□□□□□ -0.97
LINC00339-203ENST00000420503 FAT1Q14517 4588 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 TRAV8-2A0A0B4J237 113 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 TEX48A0A1B0GUV7 120 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 A8MTW9 85 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 F5H768 121 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 ISLRO14498 428 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 CNN1P51911 297 aaKnown RBP8.99□□□□□ -0.97
LINC00339-203ENST00000420503 UBE2MP61081 183 aaKnown RBP8.99□□□□□ -0.97
LINC00339-203ENST00000420503 PPP1R1AQ13522 171 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 EBLN2Q6P2I7 272 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 OR8I2Q8N0Y5 310 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 LRTM2Q8N967 370 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 OR11H7Q8NGC8 314 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 RNF141Q8WVD5 230 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 PPP1R14BQ96C90 147 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 C16orf92Q96LL3 132 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 IGF2BP2-AS1Q96M15 143 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 TMEM208Q9BTX3 173 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 SLC25A22Q9H936 323 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 SCRT2Q9NQ03 307 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 HSPB7Q9UBY9 170 aa8.99□□□□□ -0.97
LINC00339-203ENST00000420503 A0A0B4J2A0 478 aa8.98□□□□□ -0.97
LINC00339-203ENST00000420503 SFT2D2O95562 160 aa8.98□□□□□ -0.97
LINC00339-203ENST00000420503 TCRBP04435 133 aa8.98□□□□□ -0.97
LINC00339-203ENST00000420503 IAPPP10997 89 aa8.98□□□□□ -0.97
LINC00339-203ENST00000420503 ANXA3P12429 323 aa8.98□□□□□ -0.97
LINC00339-203ENST00000420503 C15orf53Q8NAA6 179 aa8.98□□□□□ -0.97
LINC00339-203ENST00000420503 UHRF2Q96PU4 802 aa8.98□□□□□ -0.97
LINC00339-203ENST00000420503 RSG1Q9BU20 258 aa8.98□□□□□ -0.97
LINC00339-203ENST00000420503 SLC25A39Q9BZJ4 359 aaPredicted RBP8.98□□□□□ -0.97
LINC00339-203ENST00000420503 C20orf85Q9H1P6 137 aa8.98□□□□□ -0.97
LINC00339-203ENST00000420503 SHPKQ9UHJ6 478 aa8.98□□□□□ -0.97
LINC00339-203ENST00000420503 C9orf170A2RU37 121 aa8.97□□□□□ -0.97
LINC00339-203ENST00000420503 OR4E1P0C645 316 aa8.97□□□□□ -0.97
LINC00339-203ENST00000420503 ANXA7P20073 488 aaKnown RBP8.97□□□□□ -0.97
LINC00339-203ENST00000420503 VAMP1P23763 118 aa8.97□□□□□ -0.97
LINC00339-203ENST00000420503 SRPXP78539 464 aa8.97□□□□□ -0.97
LINC00339-203ENST00000420503 C1orf194Q5T5A4 169 aa8.97□□□□□ -0.97
LINC00339-203ENST00000420503 SLC35E1Q96K37 410 aa8.97□□□□□ -0.97
LINC00339-203ENST00000420503 PAIP2BQ9ULR5 123 aaKnown RBP8.97□□□□□ -0.97
LINC00339-203ENST00000420503 U3KQ87 197 aa8.97□□□□□ -0.97
LINC00339-203ENST00000420503 DUXBA0A1W2PPF3 345 aa8.96□□□□□ -0.98
LINC00339-203ENST00000420503 DLK1P80370 383 aa8.96□□□□□ -0.98
LINC00339-203ENST00000420503 SMCO1Q147U7 214 aa8.96□□□□□ -0.98
LINC00339-203ENST00000420503 TRGV9Q99603 122 aa8.96□□□□□ -0.98
LINC00339-203ENST00000420503 RPRMQ9NS64 109 aa8.96□□□□□ -0.98
LINC00339-203ENST00000420503 NUDT15Q9NV35 164 aa8.96□□□□□ -0.98
LINC00339-203ENST00000420503 FAM240BA0A1B0GVZ2 78 aa8.95□□□□□ -0.98
LINC00339-203ENST00000420503 ZNF98A6NK75 572 aa8.95□□□□□ -0.98
LINC00339-203ENST00000420503 SNRPGP15A8MWD9 76 aa8.95□□□□□ -0.98
LINC00339-203ENST00000420503 INSP01308 110 aa8.95□□□□□ -0.98
LINC00339-203ENST00000420503 HTN1P15515 57 aa8.95□□□□□ -0.98
LINC00339-203ENST00000420503 NUP62P37198 522 aaPredicted RBP8.95□□□□□ -0.98
LINC00339-203ENST00000420503 FAM3BP58499 235 aaPredicted RBP8.95□□□□□ -0.98
LINC00339-203ENST00000420503 KIR3DS1Q14943 382 aa8.95□□□□□ -0.98
LINC00339-203ENST00000420503 SPATA31B1PQ5VZV4 182 aa8.95□□□□□ -0.98
LINC00339-203ENST00000420503 MZT2BQ6NZ67 158 aa8.95□□□□□ -0.98
LINC00339-203ENST00000420503 SSX7Q7RTT5 188 aa8.95□□□□□ -0.98
LINC00339-203ENST00000420503 THAP8Q8NA92 274 aa8.95□□□□□ -0.98
LINC00339-203ENST00000420503 PARD6GQ9BYG4 376 aaPredicted RBP8.95□□□□□ -0.98
LINC00339-203ENST00000420503 TRAV6A0A075B6T7 132 aa8.94□□□□□ -0.98
LINC00339-203ENST00000420503 PIGBOS1A0A0B4J2F0 54 aa8.94□□□□□ -0.98
LINC00339-203ENST00000420503 LYRM9A8MSI8 78 aa8.94□□□□□ -0.98
LINC00339-203ENST00000420503 PRSS46E5RG02 174 aa8.94□□□□□ -0.98
LINC00339-203ENST00000420503 ORM2P19652 201 aa8.94□□□□□ -0.98
LINC00339-203ENST00000420503 GPX4P36969 197 aaPredicted RBP8.94□□□□□ -0.98
LINC00339-203ENST00000420503 FGL1Q08830 312 aa8.94□□□□□ -0.98
LINC00339-203ENST00000420503 NOXA1Q86UR1 476 aa8.94□□□□□ -0.98
LINC00339-203ENST00000420503 OR1S1Q8NH92 325 aa8.94□□□□□ -0.98
LINC00339-203ENST00000420503 DMBT1Q9UGM3 2413 aaPredicted RBP8.94□□□□□ -0.98
LINC00339-203ENST00000420503 FLG2Q5D862 2391 aaPredicted RBP8.93□□□□□ -0.98
LINC00339-203ENST00000420503 PITX3O75364 302 aa8.93□□□□□ -0.98
LINC00339-203ENST00000420503 SLC25A6P12236 298 aa8.93□□□□□ -0.98
LINC00339-203ENST00000420503 GALR1P47211 349 aa8.93□□□□□ -0.98
LINC00339-203ENST00000420503 C4orf46Q504U0 113 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms