RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 AMTNQ6UX39 209 aa12.28□□□□□ -0.44
PTCD1-202ENST00000419981 TMEM182Q6ZP80 229 aaPredicted RBP12.28□□□□□ -0.44
PTCD1-202ENST00000419981 ACOT7LQ6ZUV0 252 aa12.28□□□□□ -0.44
PTCD1-202ENST00000419981 IGF2BP2-AS1Q96M15 143 aa12.28□□□□□ -0.44
PTCD1-202ENST00000419981 C17orf77Q96MU5 243 aa12.28□□□□□ -0.44
PTCD1-202ENST00000419981 STRAPQ9Y3F4 350 aaKnown RBP12.28□□□□□ -0.44
PTCD1-202ENST00000419981 DNAH17Q9UFH2 4485 aa12.27□□□□□ -0.45
PTCD1-202ENST00000419981 IGLV2-18A0A075B6J9 118 aa12.27□□□□□ -0.45
PTCD1-202ENST00000419981 DUSP14O95147 198 aaKnown RBP12.27□□□□□ -0.45
PTCD1-202ENST00000419981 S100A5P33763 92 aa12.27□□□□□ -0.45
PTCD1-202ENST00000419981 SMCO3A2RU48 225 aa12.26□□□□□ -0.45
PTCD1-202ENST00000419981 H3BRN7 92 aa12.26□□□□□ -0.45
PTCD1-202ENST00000419981 INSP01308 110 aa12.26□□□□□ -0.45
PTCD1-202ENST00000419981 CNN1P51911 297 aaKnown RBP12.26□□□□□ -0.45
PTCD1-202ENST00000419981 UBE2MP61081 183 aaKnown RBP12.26□□□□□ -0.45
PTCD1-202ENST00000419981 FGL1Q08830 312 aa12.26□□□□□ -0.45
PTCD1-202ENST00000419981 SPINK13Q1W4C9 94 aa12.26□□□□□ -0.45
PTCD1-202ENST00000419981 RNF212Q495C1 297 aa12.26□□□□□ -0.45
PTCD1-202ENST00000419981 TMEM144Q7Z5S9 345 aa12.26□□□□□ -0.45
PTCD1-202ENST00000419981 FAT2Q9NYQ8 4349 aa12.25□□□□□ -0.45
PTCD1-202ENST00000419981 M0R2Z0 102 aa12.25□□□□□ -0.45
PTCD1-202ENST00000419981 IL5P05113 134 aa12.25□□□□□ -0.45
PTCD1-202ENST00000419981 RAP2BP61225 183 aa12.25□□□□□ -0.45
PTCD1-202ENST00000419981 IGFL4Q6B9Z1 124 aa12.25□□□□□ -0.45
PTCD1-202ENST00000419981 TMEM88Q6PEY1 159 aa12.25□□□□□ -0.45
PTCD1-202ENST00000419981 CYP2G1PQ6ZSU1 146 aa12.25□□□□□ -0.45
PTCD1-202ENST00000419981 RNF182Q8N6D2 247 aa12.25□□□□□ -0.45
PTCD1-202ENST00000419981 OR11H7Q8NGC8 314 aa12.25□□□□□ -0.45
PTCD1-202ENST00000419981 SLC25A39Q9BZJ4 359 aaPredicted RBP12.25□□□□□ -0.45
PTCD1-202ENST00000419981 TRAV8-2A0A0B4J237 113 aa12.24□□□□□ -0.45
PTCD1-202ENST00000419981 CCDC160A6NGH7 325 aa12.24□□□□□ -0.45
PTCD1-202ENST00000419981 ADAP1O75689 374 aa12.24□□□□□ -0.45
PTCD1-202ENST00000419981 POLR2GP62487 172 aaKnown RBP eCLIP12.24□□□□□ -0.45
PTCD1-202ENST00000419981 Q6ZR54 194 aa12.24□□□□□ -0.45
PTCD1-202ENST00000419981 ZNF738Q8NE65 137 aa12.24□□□□□ -0.45
PTCD1-202ENST00000419981 SHANK2-AS3Q9BTD1 123 aa12.24□□□□□ -0.45
PTCD1-202ENST00000419981 PSENENQ9NZ42 101 aa12.24□□□□□ -0.45
PTCD1-202ENST00000419981 HIGD1AQ9Y241 93 aa12.24□□□□□ -0.45
PTCD1-202ENST00000419981 DNAH2Q9P225 4427 aa12.24□□□□□ -0.45
PTCD1-202ENST00000419981 LYRM9A8MSI8 78 aa12.23□□□□□ -0.45
PTCD1-202ENST00000419981 ZNF705GA8MUZ8 300 aaPredicted RBP12.23□□□□□ -0.45
PTCD1-202ENST00000419981 CRXO43186 299 aaPredicted RBP12.23□□□□□ -0.45
PTCD1-202ENST00000419981 MED14OSP0DP75 135 aa12.23□□□□□ -0.45
PTCD1-202ENST00000419981 RPL7P18124 248 aaKnown RBP12.23□□□□□ -0.45
PTCD1-202ENST00000419981 B2MP61769 119 aa12.23□□□□□ -0.45
PTCD1-202ENST00000419981 ID3Q02535 119 aa12.23□□□□□ -0.45
PTCD1-202ENST00000419981 CCDC190Q86UF4 302 aa12.23□□□□□ -0.45
PTCD1-202ENST00000419981 C15orf53Q8NAA6 179 aa12.23□□□□□ -0.45
PTCD1-202ENST00000419981 PKHD1P08F94 4074 aa12.22□□□□□ -0.45
PTCD1-202ENST00000419981 C9orf170A2RU37 121 aa12.22□□□□□ -0.45
PTCD1-202ENST00000419981 SSSCA1O60232 199 aa12.22□□□□□ -0.45
PTCD1-202ENST00000419981 HYPMO75409 117 aa12.22□□□□□ -0.45
PTCD1-202ENST00000419981 OR5G3P0C626 314 aa12.22□□□□□ -0.45
PTCD1-202ENST00000419981 LINC00869P0C866 280 aa12.22□□□□□ -0.45
PTCD1-202ENST00000419981 SOHLH1Q5JUK2 328 aa12.22□□□□□ -0.45
PTCD1-202ENST00000419981 BAP18Q8IXM2 172 aa12.22□□□□□ -0.45
PTCD1-202ENST00000419981 PCLOQ9Y6V0 5065 aa12.21□□□□□ -0.45
PTCD1-202ENST00000419981 PMS2P5A8MQ11 134 aa12.21□□□□□ -0.45
PTCD1-202ENST00000419981 BOLA2-SMG1P6H3BVE0 249 aa12.21□□□□□ -0.45
PTCD1-202ENST00000419981 PRM2P04554 102 aa12.21□□□□□ -0.45
PTCD1-202ENST00000419981 INPP1P49441 399 aa12.21□□□□□ -0.45
PTCD1-202ENST00000419981 PLP1P60201 277 aa12.21□□□□□ -0.45
PTCD1-202ENST00000419981 SELENOTP62341 195 aa12.21□□□□□ -0.45
PTCD1-202ENST00000419981 SPANXN2Q5MJ10 180 aa12.21□□□□□ -0.45
PTCD1-202ENST00000419981 S100A7AQ86SG5 101 aa12.21□□□□□ -0.45
PTCD1-202ENST00000419981 UHRF2Q96PU4 802 aa12.21□□□□□ -0.45
PTCD1-202ENST00000419981 TRAV12-2A0A075B6T6 113 aa12.2□□□□□ -0.46
PTCD1-202ENST00000419981 A0A087X0K7 114 aa12.2□□□□□ -0.46
PTCD1-202ENST00000419981 NAP1L6A6NFF2 107 aa12.2□□□□□ -0.46
PTCD1-202ENST00000419981 NDUFB6O95139 128 aa12.2□□□□□ -0.46
PTCD1-202ENST00000419981 TSPOP30536 169 aa12.2□□□□□ -0.46
PTCD1-202ENST00000419981 RRAS2P62070 204 aaPredicted RBP12.2□□□□□ -0.46
PTCD1-202ENST00000419981 DLK1P80370 383 aa12.2□□□□□ -0.46
PTCD1-202ENST00000419981 HIST1H1AQ02539 215 aaPredicted RBP12.2□□□□□ -0.46
PTCD1-202ENST00000419981 SMIM8Q96KF7 97 aa12.2□□□□□ -0.46
PTCD1-202ENST00000419981 SRRQ9GZT4 340 aa12.2□□□□□ -0.46
PTCD1-202ENST00000419981 PPP1R14DQ9NXH3 145 aa12.2□□□□□ -0.46
PTCD1-202ENST00000419981 PKD1P98161 4303 aa12.2□□□□□ -0.46
PTCD1-202ENST00000419981 CCNKO75909 580 aa12.19□□□□□ -0.46
PTCD1-202ENST00000419981 DEFB130BP0DP73 79 aa12.19□□□□□ -0.46
PTCD1-202ENST00000419981 DEFB130AP0DP74 79 aa12.19□□□□□ -0.46
PTCD1-202ENST00000419981 CXCL3P19876 107 aa12.19□□□□□ -0.46
PTCD1-202ENST00000419981 FAM3BP58499 235 aaPredicted RBP12.19□□□□□ -0.46
PTCD1-202ENST00000419981 RHOBP62745 196 aa12.19□□□□□ -0.46
PTCD1-202ENST00000419981 C1orf134Q5TEV5 83 aa12.19□□□□□ -0.46
PTCD1-202ENST00000419981 TMEM256Q8N2U0 113 aa12.19□□□□□ -0.46
PTCD1-202ENST00000419981 OR8A1Q8NGG7 326 aa12.19□□□□□ -0.46
PTCD1-202ENST00000419981 LRRC20Q8TCA0 184 aa12.19□□□□□ -0.46
PTCD1-202ENST00000419981 ATG101Q9BSB4 218 aa12.19□□□□□ -0.46
PTCD1-202ENST00000419981 ARL6Q9H0F7 186 aa12.19□□□□□ -0.46
PTCD1-202ENST00000419981 NPVFQ9HCQ7 196 aa12.19□□□□□ -0.46
PTCD1-202ENST00000419981 FNDC10F2Z333 226 aa12.18□□□□□ -0.46
PTCD1-202ENST00000419981 SCGB1D2O95969 90 aa12.18□□□□□ -0.46
PTCD1-202ENST00000419981 OR4E1P0C645 316 aa12.18□□□□□ -0.46
PTCD1-202ENST00000419981 METTL15P1P0C7V9 234 aa12.18□□□□□ -0.46
PTCD1-202ENST00000419981 PSG3Q16557 428 aa12.18□□□□□ -0.46
PTCD1-202ENST00000419981 TRIQKQ629K1 86 aa12.18□□□□□ -0.46
PTCD1-202ENST00000419981 TMEM14EPQ6UXP3 125 aa12.18□□□□□ -0.46
PTCD1-202ENST00000419981 OR10P1Q8NGE3 313 aa12.18□□□□□ -0.46
PTCD1-202ENST00000419981 MGAT4CQ9UBM8 478 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms