RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 A0A087X0T9 212 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 A0A1B0GX51 115 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 TLCD2A6NGC4 264 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 J3KT08 172 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 K7ERJ3 54 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 M0QZK8 103 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 BCL2P10415 239 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 SDC4P31431 198 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 TMBIM6P55061 237 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 ARPP19P56211 112 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 AP1S1P61966 158 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 RHOGP84095 191 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 HES1Q14469 280 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 SMIM21Q3B7S5 101 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 ZNF791Q3KP31 576 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 SOSTDC1Q6X4U4 206 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 TMEM229BQ8NBD8 167 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 OR4E2Q8NGC2 313 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 OR5A1Q8NGJ0 315 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 SCGB3A1Q96QR1 104 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 SLC25A21Q9BQT8 299 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 POPDC3Q9HBV1 291 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 ITSN1Q15811 1721 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 ARHGEF28Q8N1W1 1705 aaKnown RBP1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 WDR90Q96KV7 1748 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 CLTCQ00610 1675 aaKnown RBP1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 MYO9BQ13459 2157 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 ZCCHC11Q5TAX3 1644 aaKnown RBP1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 ADGRB1O14514 1584 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 GLI2P10070 1586 aa1.51□□□□□ -2.17
HMGB1P49-201ENST00000418882 EFCAB6Q5THR3 1501 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 SYCP2Q9BX26 1530 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 MYH7P12883 1935 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 CD109Q6YHK3 1445 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 RFX7Q2KHR2 1363 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 IGHV1-18A0A0C4DH31 117 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 ARRDC5A6NEK1 342 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 H7C2G1 150 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 C19orf84I3L1E1 186 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 SLC22A1O15245 554 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 SYNGR2O43760 224 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 TNFSF15O95150 251 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 MSMBP08118 114 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 DYNLT3P51808 116 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 YPEL3P61236 119 aaPredicted RBP1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 EIF5AP63241 154 aaKnown RBP1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 PATE2Q6UY27 113 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 Q6ZQT0 140 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 PDZD9Q8IXQ8 264 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 OR2T10Q8NGZ9 312 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 AQP3Q92482 292 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 HIST1H2BLQ99880 126 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 HIGD2AQ9BW72 106 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 OR2H1Q9GZK4 316 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 YIPF3Q9GZM5 350 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 NAT8BQ9UHF3 227 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 MROH2AA6NES4 1674 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 TRPM6Q9BX84 2022 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 FRMPD1Q5SYB0 1578 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 MYH13Q9UKX3 1938 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 PLXND1Q9Y4D7 1925 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 ICE1Q9Y2F5 2266 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 FANCAO15360 1455 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 ATP10BO94823 1461 aa1.5□□□□□ -2.17
HMGB1P49-201ENST00000418882 FAM135BQ49AJ0 1406 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 CCDC171Q6TFL3 1326 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 ZNF638Q14966 1978 aaKnown RBP1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 MYH6P13533 1939 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 ARL5CA6NH57 179 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 B4DSR2 109 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 C9JAW5 83 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 LY6LH3BQJ8 138 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 J3QQQ9 107 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 CREBL2O60519 120 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 PFDN1O60925 122 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 GADD45GO95257 159 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 CTSDP07339 412 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 SRP14P37108 136 aaKnown RBP1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 UBE2BP63146 152 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 DYNLT1P63172 113 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 PSG9Q00887 426 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 RELAQ04206 551 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 PLCXD2Q0VAA5 305 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 SS18Q15532 418 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 C22orf39Q6P5X5 142 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 AGTRAPQ6RW13 159 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 Q6ZS52 159 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 PHF5AQ7RTV0 110 aaKnown RBP1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 SLC35E3Q7Z769 313 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 TRAPPC6BQ86SZ2 158 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 Q8IYB0 196 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 C9orf163Q8N9P6 203 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 ZNF418Q8TF45 676 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 CANT1Q8WVQ1 401 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 TCEAL4Q96EI5 215 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 PRADC1Q9BSG0 188 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 CACYBPQ9HB71 228 aaKnown RBP1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 NIT2Q9NQR4 276 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 HSPB8Q9UJY1 196 aa1.49□□□□□ -2.17
HMGB1P49-201ENST00000418882 HHLA3Q9XRX5 114 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms