RNA–Protein interactions for RNA: ENST00000417271.1

SLC8A1-210, Transcript of solute carrier family 8 member A1, humanhuman

TSL 1 (best)

Gene SLC8A1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8A1-210ENST00000417271 WDR61Q9GZS3 305 aaKnown RBP4.13□□□□□ -1.75
SLC8A1-210ENST00000417271 ARV1Q9H2C2 271 aa4.13□□□□□ -1.75
SLC8A1-210ENST00000417271 TMEM231Q9H6L2 316 aa4.13□□□□□ -1.75
SLC8A1-210ENST00000417271 TUBA4BQ9H853 241 aa4.13□□□□□ -1.75
SLC8A1-210ENST00000417271 SLC39A9Q9NUM3 307 aa4.13□□□□□ -1.75
SLC8A1-210ENST00000417271 FBXL17Q9UF56 701 aa4.13□□□□□ -1.75
SLC8A1-210ENST00000417271 PXMP4Q9Y6I8 212 aa4.13□□□□□ -1.75
SLC8A1-210ENST00000417271 A0A1B0GVG6 124 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 RNF222A6NCQ9 220 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 HELTA6NFD8 242 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 CFDP00746 253 aaPredicted RBP4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 PLP1P60201 277 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 PAFAH1B2P68402 229 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 RAB31Q13636 194 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 HAGHQ16775 308 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 ATP6V1FQ16864 119 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 PSMG4Q5JS54 123 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 C10orf113Q5VZT2 155 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 SPATA31B1PQ5VZV4 182 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 IGFL4Q6B9Z1 124 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 LINC00305Q7Z4B0 112 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 C20orf173Q96LM9 149 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 AQP10Q96PS8 301 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 FAM110AQ9BQ89 295 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 NRN1Q9NPD7 142 aa4.12□□□□□ -1.75
SLC8A1-210ENST00000417271 TRAV2A0A0B4J234 112 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 A8MZ25 164 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 SOCS3O14543 225 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 MRPS12O15235 138 aaKnown RBP4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 ARPC5O15511 151 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 CD5P06127 495 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 HLA-DMBP28068 263 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 NUP62P37198 522 aaPredicted RBP4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 GALR1P47211 349 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 RPL29P47914 159 aaKnown RBP4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 CD300CQ08708 224 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 FGL1Q08830 312 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 C1orf194Q5T5A4 169 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 LINC00322Q6ZN03 302 aaPredicted RBP4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 RNF182Q8N6D2 247 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 HSD17B11Q8NBQ5 300 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 OR11H4Q8NGC9 324 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 ST6GAL2Q96JF0 529 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 LINC00052Q96N35 136 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 SEPSECSQ9HD40 501 aaKnown RBP4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 DNAJC4Q9NNZ3 241 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 TNFSF18Q9UNG2 199 aa4.11□□□□□ -1.75
SLC8A1-210ENST00000417271 SORL1Q92673 2214 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 LOC102724200A0A096LPH7 203 aaPredicted RBP4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 TRAV8-2A0A0B4J237 113 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 F6UB75 175 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 H3BQ15 152 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 SLC17A3O00476 420 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 LCE2BO14633 110 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 MPDU1O75352 247 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 IFNA5P01569 189 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 PYYP10082 97 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 RAB2AP61019 212 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 ACTL10Q5JWF8 245 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 FFAR4Q5NUL3 377 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 PXDC1Q5TGL8 231 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 GDF5OSQ5U4N7 250 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 FAM78BQ5VT40 261 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 RPL7L1Q6DKI1 246 aaKnown RBP4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 Q6ZRG5 221 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 MIR17HGQ75NE6 70 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 ZNF709Q8N972 641 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 INO80EQ8NBZ0 244 aaPredicted RBP4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 SCGB1C1Q8TD33 95 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 ASB13Q8WXK3 278 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 C16orf92Q96LL3 132 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 SLC25A2Q9BXI2 301 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 SH3BGRL3Q9H299 93 aa4.1□□□□□ -1.75
SLC8A1-210ENST00000417271 ELOA3CA0A087WX78 387 aaPredicted RBP4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 A0A087X0K7 114 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 C17orf112F2Z3M2 114 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 HMGB3O15347 200 aaKnown RBP4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 IGKV3-20P01619 116 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 OR10J4P0C629 311 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 ZNF705DP0CH99 300 aaPredicted RBP4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 ZNF705BP0CI00 300 aaPredicted RBP4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 IGLC2P0DOY2 106 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 RPL7P18124 248 aaKnown RBP4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 CXCL2P19875 107 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 C4BPBP20851 252 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 ATP6V0CP27449 155 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 PSMB3P49720 205 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 FXYD7P58549 80 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 SNRPD3P62318 126 aaKnown RBP4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 DEFB135Q30KP9 77 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 TRPT1Q86TN4 253 aaKnown RBP4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 OR1L4Q8NGR5 311 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 GATAD1Q8WUU5 269 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 FAM167A-AS1Q96KT0 104 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 GPR82Q96P67 336 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 RCHY1Q96PM5 261 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 PFDN5Q99471 154 aa4.09□□□□□ -1.75
SLC8A1-210ENST00000417271 TM2D3Q9BRN9 247 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms