RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 RNF212Q495C1 297 aa10.24□□□□□ -0.77
PAF1-202ENST00000416728 SOHLH1Q5JUK2 328 aa10.24□□□□□ -0.77
PAF1-202ENST00000416728 TMEM88Q6PEY1 159 aa10.24□□□□□ -0.77
PAF1-202ENST00000416728 AMTNQ6UX39 209 aa10.24□□□□□ -0.77
PAF1-202ENST00000416728 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.24□□□□□ -0.77
PAF1-202ENST00000416728 Q6ZR54 194 aa10.24□□□□□ -0.77
PAF1-202ENST00000416728 FAT2Q9NYQ8 4349 aa10.23□□□□□ -0.77
PAF1-202ENST00000416728 H3BP45 60 aa10.23□□□□□ -0.77
PAF1-202ENST00000416728 DUSP14O95147 198 aaKnown RBP10.23□□□□□ -0.77
PAF1-202ENST00000416728 INSP01308 110 aa10.23□□□□□ -0.77
PAF1-202ENST00000416728 CNN1P51911 297 aaKnown RBP10.23□□□□□ -0.77
PAF1-202ENST00000416728 TMEM182Q6ZP80 229 aaPredicted RBP10.23□□□□□ -0.77
PAF1-202ENST00000416728 ACOT7LQ6ZUV0 252 aa10.23□□□□□ -0.77
PAF1-202ENST00000416728 DEDD2Q8WXF8 326 aa10.23□□□□□ -0.77
PAF1-202ENST00000416728 C17orf77Q96MU5 243 aa10.23□□□□□ -0.77
PAF1-202ENST00000416728 STRAPQ9Y3F4 350 aaKnown RBP10.23□□□□□ -0.77
PAF1-202ENST00000416728 DNAH2Q9P225 4427 aa10.22□□□□□ -0.77
PAF1-202ENST00000416728 FGL1Q08830 312 aa10.22□□□□□ -0.77
PAF1-202ENST00000416728 SPINK13Q1W4C9 94 aa10.22□□□□□ -0.77
PAF1-202ENST00000416728 OR11H7Q8NGC8 314 aa10.22□□□□□ -0.77
PAF1-202ENST00000416728 V9GYH0 126 aa10.22□□□□□ -0.77
PAF1-202ENST00000416728 SMCO3A2RU48 225 aa10.21□□□□□ -0.78
PAF1-202ENST00000416728 M0R2Z0 102 aa10.21□□□□□ -0.78
PAF1-202ENST00000416728 RAP2BP61225 183 aa10.21□□□□□ -0.78
PAF1-202ENST00000416728 IGFL4Q6B9Z1 124 aa10.21□□□□□ -0.78
PAF1-202ENST00000416728 TMEM144Q7Z5S9 345 aa10.21□□□□□ -0.78
PAF1-202ENST00000416728 RNF182Q8N6D2 247 aa10.21□□□□□ -0.78
PAF1-202ENST00000416728 C15orf53Q8NAA6 179 aa10.21□□□□□ -0.78
PAF1-202ENST00000416728 TRAV8-2A0A0B4J237 113 aa10.2□□□□□ -0.78
PAF1-202ENST00000416728 LYRM9A8MSI8 78 aa10.2□□□□□ -0.78
PAF1-202ENST00000416728 ZNF705GA8MUZ8 300 aaPredicted RBP10.2□□□□□ -0.78
PAF1-202ENST00000416728 H3BRN7 92 aa10.2□□□□□ -0.78
PAF1-202ENST00000416728 CRXO43186 299 aaPredicted RBP10.2□□□□□ -0.78
PAF1-202ENST00000416728 IL5P05113 134 aa10.2□□□□□ -0.78
PAF1-202ENST00000416728 RPL7P18124 248 aaKnown RBP10.2□□□□□ -0.78
PAF1-202ENST00000416728 S100A5P33763 92 aa10.2□□□□□ -0.78
PAF1-202ENST00000416728 B2MP61769 119 aa10.2□□□□□ -0.78
PAF1-202ENST00000416728 C1orf134Q5TEV5 83 aa10.2□□□□□ -0.78
PAF1-202ENST00000416728 CYP2G1PQ6ZSU1 146 aa10.2□□□□□ -0.78
PAF1-202ENST00000416728 BAP18Q8IXM2 172 aa10.2□□□□□ -0.78
PAF1-202ENST00000416728 ZNF738Q8NE65 137 aa10.2□□□□□ -0.78
PAF1-202ENST00000416728 SHANK2-AS3Q9BTD1 123 aa10.2□□□□□ -0.78
PAF1-202ENST00000416728 SLC25A39Q9BZJ4 359 aaPredicted RBP10.2□□□□□ -0.78
PAF1-202ENST00000416728 HIGD1AQ9Y241 93 aa10.2□□□□□ -0.78
PAF1-202ENST00000416728 PKHD1P08F94 4074 aa10.19□□□□□ -0.78
PAF1-202ENST00000416728 PRM2P04554 102 aa10.19□□□□□ -0.78
PAF1-202ENST00000416728 FAM3BP58499 235 aaPredicted RBP10.19□□□□□ -0.78
PAF1-202ENST00000416728 UBE2MP61081 183 aaKnown RBP10.19□□□□□ -0.78
PAF1-202ENST00000416728 POLR2GP62487 172 aaKnown RBP eCLIP10.19□□□□□ -0.78
PAF1-202ENST00000416728 ID3Q02535 119 aa10.19□□□□□ -0.78
PAF1-202ENST00000416728 ATG101Q9BSB4 218 aa10.19□□□□□ -0.78
PAF1-202ENST00000416728 BOLA2-SMG1P6H3BVE0 249 aa10.18□□□□□ -0.78
PAF1-202ENST00000416728 HYPMO75409 117 aa10.18□□□□□ -0.78
PAF1-202ENST00000416728 ADAP1O75689 374 aa10.18□□□□□ -0.78
PAF1-202ENST00000416728 OR5G3P0C626 314 aa10.18□□□□□ -0.78
PAF1-202ENST00000416728 LINC00869P0C866 280 aa10.18□□□□□ -0.78
PAF1-202ENST00000416728 DEFB130BP0DP73 79 aa10.18□□□□□ -0.78
PAF1-202ENST00000416728 DEFB130AP0DP74 79 aa10.18□□□□□ -0.78
PAF1-202ENST00000416728 TSPOP30536 169 aa10.18□□□□□ -0.78
PAF1-202ENST00000416728 PSENENQ9NZ42 101 aa10.18□□□□□ -0.78
PAF1-202ENST00000416728 TRAV12-2A0A075B6T6 113 aa10.17□□□□□ -0.78
PAF1-202ENST00000416728 C9orf170A2RU37 121 aa10.17□□□□□ -0.78
PAF1-202ENST00000416728 SELENOTP62341 195 aa10.17□□□□□ -0.78
PAF1-202ENST00000416728 RHOBP62745 196 aa10.17□□□□□ -0.78
PAF1-202ENST00000416728 HIST1H1AQ02539 215 aaPredicted RBP10.17□□□□□ -0.78
PAF1-202ENST00000416728 S100A7AQ86SG5 101 aa10.17□□□□□ -0.78
PAF1-202ENST00000416728 LRRC20Q8TCA0 184 aa10.17□□□□□ -0.78
PAF1-202ENST00000416728 UHRF2Q96PU4 802 aa10.17□□□□□ -0.78
PAF1-202ENST00000416728 PPP1R14DQ9NXH3 145 aa10.17□□□□□ -0.78
PAF1-202ENST00000416728 F5H768 121 aa10.16□□□□□ -0.78
PAF1-202ENST00000416728 SSSCA1O60232 199 aa10.16□□□□□ -0.78
PAF1-202ENST00000416728 CXCL3P19876 107 aa10.16□□□□□ -0.78
PAF1-202ENST00000416728 PLP1P60201 277 aa10.16□□□□□ -0.78
PAF1-202ENST00000416728 RRAS2P62070 204 aaPredicted RBP10.16□□□□□ -0.78
PAF1-202ENST00000416728 CCDC190Q86UF4 302 aa10.16□□□□□ -0.78
PAF1-202ENST00000416728 OR8A1Q8NGG7 326 aa10.16□□□□□ -0.78
PAF1-202ENST00000416728 LINC01587Q99440 93 aa10.16□□□□□ -0.78
PAF1-202ENST00000416728 DNAH17Q9UFH2 4485 aa10.16□□□□□ -0.78
PAF1-202ENST00000416728 A0A087X0K7 114 aa10.15□□□□□ -0.78
PAF1-202ENST00000416728 PLAC8L1A1L4L8 177 aa10.15□□□□□ -0.78
PAF1-202ENST00000416728 CCDC160A6NGH7 325 aa10.15□□□□□ -0.78
PAF1-202ENST00000416728 PMS2P5A8MQ11 134 aa10.15□□□□□ -0.78
PAF1-202ENST00000416728 ATP5G1P05496 136 aa10.15□□□□□ -0.78
PAF1-202ENST00000416728 AZU1P20160 251 aa10.15□□□□□ -0.78
PAF1-202ENST00000416728 ATP5G3P48201 142 aa10.15□□□□□ -0.78
PAF1-202ENST00000416728 DLK1P80370 383 aa10.15□□□□□ -0.78
PAF1-202ENST00000416728 ZNF575Q86XF7 245 aa10.15□□□□□ -0.78
PAF1-202ENST00000416728 TMEM256Q8N2U0 113 aa10.15□□□□□ -0.78
PAF1-202ENST00000416728 SMIM8Q96KF7 97 aa10.15□□□□□ -0.78
PAF1-202ENST00000416728 RNF24Q9Y225 148 aa10.15□□□□□ -0.78
PAF1-202ENST00000416728 DNAH11Q96DT5 4516 aa10.15□□□□□ -0.78
PAF1-202ENST00000416728 CCNKO75909 580 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 NDUFB6O95139 128 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 NUDT3O95989 172 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 HTN1P15515 57 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 INPP1P49441 399 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 TAS2R60P59551 318 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 FCN2Q15485 313 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 PSG3Q16557 428 aa10.14□□□□□ -0.79
PAF1-202ENST00000416728 SPANXN2Q5MJ10 180 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms