RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 BPIFCQ8NFQ6 507 aa7□□□□□ -1.29
MDC1-202ENST00000416571 GNPNAT1Q96EK6 184 aaPredicted RBP7□□□□□ -1.29
MDC1-202ENST00000416571 C16orf74Q96GX8 76 aa7□□□□□ -1.29
MDC1-202ENST00000416571 PRRT1Q99946 306 aa7□□□□□ -1.29
MDC1-202ENST00000416571 SHPKQ9UHJ6 478 aa7□□□□□ -1.29
MDC1-202ENST00000416571 SLC45A2Q9UMX9 530 aa7□□□□□ -1.29
MDC1-202ENST00000416571 TIMM8BQ9Y5J9 83 aaPredicted RBP7□□□□□ -1.29
MDC1-202ENST00000416571 LRP1BQ9NZR2 4599 aa7□□□□□ -1.29
MDC1-202ENST00000416571 RGS5O15539 181 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 AKAIN1P0CW23 69 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 ANXA3P12429 323 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 ORM2P19652 201 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 AZU1P20160 251 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 TAS2R60P59551 318 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 SRPXP78539 464 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 DLK1P80370 383 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 HIST1H1AQ02539 215 aaPredicted RBP6.99□□□□□ -1.29
MDC1-202ENST00000416571 OR5I1Q13606 314 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 LYZL2Q7Z4W2 148 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 TMEM144Q7Z5S9 345 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 ZNF738Q8NE65 137 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 OR4D5Q8NGN0 318 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 OR10J6PQ8NGY7 276 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 SCGB3A2Q96PL1 93 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 TMEM147Q9BVK8 224 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 SLC25A39Q9BZJ4 359 aaPredicted RBP6.99□□□□□ -1.29
MDC1-202ENST00000416571 Q9H3A6 140 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 PRR13Q9NZ81 148 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 PTTG2Q9NZH5 202 aa6.99□□□□□ -1.29
MDC1-202ENST00000416571 PIGBOS1A0A0B4J2F0 54 aa6.98□□□□□ -1.29
MDC1-202ENST00000416571 PLAC8L1A1L4L8 177 aa6.98□□□□□ -1.29
MDC1-202ENST00000416571 ADAP1O75689 374 aa6.98□□□□□ -1.29
MDC1-202ENST00000416571 BTF3P20290 206 aaKnown RBP6.98□□□□□ -1.29
MDC1-202ENST00000416571 KRTAP10-2P60368 255 aa6.98□□□□□ -1.29
MDC1-202ENST00000416571 RPP30P78346 268 aaKnown RBP6.98□□□□□ -1.29
MDC1-202ENST00000416571 IGFL4Q6B9Z1 124 aa6.98□□□□□ -1.29
MDC1-202ENST00000416571 ZNF493Q6ZR52 646 aa6.98□□□□□ -1.29
MDC1-202ENST00000416571 CLVS1Q8IUQ0 354 aaPredicted RBP6.98□□□□□ -1.29
MDC1-202ENST00000416571 RNF182Q8N6D2 247 aa6.98□□□□□ -1.29
MDC1-202ENST00000416571 THAP8Q8NA92 274 aa6.98□□□□□ -1.29
MDC1-202ENST00000416571 OR51S1Q8NGJ8 323 aa6.98□□□□□ -1.29
MDC1-202ENST00000416571 UHRF2Q96PU4 802 aa6.98□□□□□ -1.29
MDC1-202ENST00000416571 SCP2D1Q9UJQ7 156 aa6.98□□□□□ -1.29
MDC1-202ENST00000416571 IGKV1OR2-108A0A075B7D4 117 aa6.97□□□□□ -1.29
MDC1-202ENST00000416571 TRAV26-1A0A087WT03 109 aa6.97□□□□□ -1.29
MDC1-202ENST00000416571 A0A1W2PPQ1 181 aa6.97□□□□□ -1.29
MDC1-202ENST00000416571 IAPPP10997 89 aa6.97□□□□□ -1.29
MDC1-202ENST00000416571 RPL7P18124 248 aaKnown RBP6.97□□□□□ -1.29
MDC1-202ENST00000416571 M6PRP20645 277 aa6.97□□□□□ -1.29
MDC1-202ENST00000416571 RAP2BP61225 183 aa6.97□□□□□ -1.29
MDC1-202ENST00000416571 AKR1C1Q04828 323 aa6.97□□□□□ -1.29
MDC1-202ENST00000416571 LRRC20Q8TCA0 184 aa6.97□□□□□ -1.29
MDC1-202ENST00000416571 TMEM263Q8WUH6 116 aaKnown RBP6.97□□□□□ -1.29
MDC1-202ENST00000416571 SMIM4Q8WVI0 70 aa6.97□□□□□ -1.29
MDC1-202ENST00000416571 KRTAP1-5Q9BYS1 174 aa6.97□□□□□ -1.29
MDC1-202ENST00000416571 NOP10Q9NPE3 64 aaKnown RBP6.97□□□□□ -1.29
MDC1-202ENST00000416571 TRAV8-2A0A0B4J237 113 aa6.96□□□□□ -1.3
MDC1-202ENST00000416571 A0A0J9YY99 117 aa6.96□□□□□ -1.3
MDC1-202ENST00000416571 EREGO14944 169 aa6.96□□□□□ -1.3
MDC1-202ENST00000416571 MED6O75586 246 aa6.96□□□□□ -1.3
MDC1-202ENST00000416571 INAFM2P0DMQ5 153 aa6.96□□□□□ -1.3
MDC1-202ENST00000416571 GATA2P23769 480 aaPredicted RBP6.96□□□□□ -1.3
MDC1-202ENST00000416571 CDKN1BP46527 198 aa6.96□□□□□ -1.3
MDC1-202ENST00000416571 IL18Q14116 193 aa6.96□□□□□ -1.3
MDC1-202ENST00000416571 CCDC28AQ8IWP9 274 aa6.96□□□□□ -1.3
MDC1-202ENST00000416571 OR8A1Q8NGG7 326 aa6.96□□□□□ -1.3
MDC1-202ENST00000416571 RXFP4Q8TDU9 374 aa6.96□□□□□ -1.3
MDC1-202ENST00000416571 ZNF503Q96F45 646 aa6.96□□□□□ -1.3
MDC1-202ENST00000416571 C17orf77Q96MU5 243 aa6.96□□□□□ -1.3
MDC1-202ENST00000416571 CIB3Q96Q77 187 aaPredicted RBP6.96□□□□□ -1.3
MDC1-202ENST00000416571 UPK3BQ9BT76 320 aa6.96□□□□□ -1.3
MDC1-202ENST00000416571 MCUBQ9NWR8 336 aa6.96□□□□□ -1.3
MDC1-202ENST00000416571 ZNF586Q9NXT0 402 aa6.96□□□□□ -1.3
MDC1-202ENST00000416571 APOBP04114 4563 aaKnown RBP6.96□□□□□ -1.3
MDC1-202ENST00000416571 H3BRN7 92 aa6.95□□□□□ -1.3
MDC1-202ENST00000416571 H7BYZ3 331 aa6.95□□□□□ -1.3
MDC1-202ENST00000416571 ZNF701M0R085 212 aaPredicted RBP6.95□□□□□ -1.3
MDC1-202ENST00000416571 RLN2P04090 185 aa6.95□□□□□ -1.3
MDC1-202ENST00000416571 S100A7AQ86SG5 101 aa6.95□□□□□ -1.3
MDC1-202ENST00000416571 HIGD1AQ9Y241 93 aa6.95□□□□□ -1.3
MDC1-202ENST00000416571 MRPS16Q9Y3D3 137 aaKnown RBP6.95□□□□□ -1.3
MDC1-202ENST00000416571 DUXBA0A1W2PPF3 345 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 GAGE12BA1L429 117 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 SMCO3A2RU48 225 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 SNURFLB1AK76 121 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 WRBO00258 174 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 GAGE7O76087 117 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 IL5P05113 134 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 OR5G3P0C626 314 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 GAGE12FP0CL80 117 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 GAGE12GP0CL81 117 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 GAGE12IP0CL82 117 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 CXCL3P19876 107 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 PSG3Q16557 428 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 ESRGQ1W209 222 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 TMEM182Q6ZP80 229 aaPredicted RBP6.94□□□□□ -1.3
MDC1-202ENST00000416571 RNASE8Q8TDE3 154 aaKnown RBP6.94□□□□□ -1.3
MDC1-202ENST00000416571 FRZBQ92765 325 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 C20orf144Q9BQM9 153 aa6.94□□□□□ -1.3
MDC1-202ENST00000416571 SHANK2-AS3Q9BTD1 123 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms