RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 KNTC1P50748 2209 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 MCM3APO60318 1980 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 SCN8AQ9UQD0 1980 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 SCN10AQ9Y5Y9 1956 aa0.05□□□□□ -2.4
TRAPPC13-203ENST00000415825 FMN1Q68DA7 1419 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 CEP164Q9UPV0 1460 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 NSD1Q96L73 2696 aaPredicted RBP0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 DOCK5Q9H7D0 1870 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 C9orf170A2RU37 121 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 TMEM238C9JI98 176 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 C5orf67F2Z3F1 127 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 H7BYZ3 331 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 K7EIL1 84 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 NCR3O14931 201 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 ATP5HO75947 161 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 PROSCO94903 275 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 IGLV3-1P01715 115 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 CD14P08571 375 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 NFYBP25208 207 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 GLRXP35754 106 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 ANP32AP39687 249 aaKnown RBP0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 TMBIM6P55061 237 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 FXYD4P59646 89 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 UBE2BP63146 152 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 REEP5Q00765 189 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 SNCBQ16143 134 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 ZCCHC23Q6ZST2 131 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 PHF5AQ7RTV0 110 aaKnown RBP0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 LYG2Q86SG7 212 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 ST6GALNAC3Q8NDV1 305 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 PXT1Q8NFP0 134 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 CDC26Q8NHZ8 85 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 TEX47Q8TBZ9 253 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 CANT1Q8WVQ1 401 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 TEX37Q96LM6 180 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 LYSMD1Q96S90 227 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 SMR3AQ99954 134 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 MRPL57Q9BQC6 102 aaKnown RBP0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 LIMD2Q9BT23 127 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 IMUPQ9GZP8 106 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 POPDC3Q9HBV1 291 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 NIT2Q9NQR4 276 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 OTORQ9NRC9 128 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 NHP2Q9NX24 153 aaKnown RBP0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 RASL12Q9NYN1 266 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 ORMDL1Q9P0S3 153 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 UFC1Q9Y3C8 167 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 ANAPC1Q9H1A4 1944 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 EML6Q6ZMW3 1958 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 RTL1A6NKG5 1358 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 HEATR1Q9H583 2144 aaKnown RBP0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 LAMB4A4D0S4 1761 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 BCL9O00512 1426 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 MIA2Q96PC5 1412 aa0.04□□□□□ -2.4
TRAPPC13-203ENST00000415825 CECR2Q9BXF3 1484 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 BDP1A6H8Y1 2624 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 ARHGEF11O15085 1522 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 PLXND1Q9Y4D7 1925 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 EML5Q05BV3 1969 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 KIAA1549Q9HCM3 1950 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 TRGV10A0A0A0MS01 117 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 DUXBA0A1W2PPF3 345 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 OR2T8A6NH00 312 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 F8W1H4 67 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 M0R233 179 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 BANF1O75531 89 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 IFNA7P01567 189 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 TRGC2P03986 189 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 CXCL8P10145 99 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 IDO1P14902 403 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 G0S2P27469 103 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 PPP1R2P41236 205 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 CRYBA4P53673 196 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 TAS2R41P59536 307 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 GNG3P63215 75 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 CDK6Q00534 326 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 MIR22HGQ0VDD5 57 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 EIF3IQ13347 325 aaKnown RBP0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 CIRBPQ14011 172 aaKnown RBP0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 POU6F1Q14863 301 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 ASB16-AS1Q495Z4 193 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 LYRM7Q5U5X0 104 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 C1orf140Q5VVS0 124 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 EIF5AL1Q6IS14 154 aaKnown RBP0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 PPP1R2P3Q6NXS1 205 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 C4orf22Q6V702 233 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 FOXI2Q6ZQN5 318 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 LINC00269Q8N2A0 174 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 OR5D14Q8NGL3 314 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 TMEM254Q8TBM7 123 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 CHCHD1Q96BP2 118 aaKnown RBP0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 MALSU1Q96EH3 234 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 BTF3L4Q96K17 158 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 HYLS1Q96M11 299 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 YPEL2Q96QA6 119 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 TP53RKQ96S44 253 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 GINS3Q9BRX5 216 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 SH3BGRL3Q9H299 93 aa0.03□□□□□ -2.4
TRAPPC13-203ENST00000415825 CACYBPQ9HB71 228 aaKnown RBP0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms